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Articles published in
PLoS Comput Biol
    March 2024
  1. VALEGA-MACKENZIE W, Rodriguez Messan M, Yogurtcu ON, Nukala U, et al
    Dose optimization of an adjuvanted peptide-based personalized neoantigen melanoma vaccine.
    PLoS Comput Biol. 2024;20:e1011247.
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    January 2024
  2. CHAN LYH, Ro G, Midtbo JE, Di Ruscio F, et al
    Modeling geographic vaccination strategies for COVID-19 in Norway.
    PLoS Comput Biol. 2024;20:e1011426.
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  3. PANDEY A, Feuka AB, Cosgrove M, Moriarty M, et al
    Wildlife vaccination strategies for eliminating bovine tuberculosis in white-tailed deer populations.
    PLoS Comput Biol. 2024;20:e1011287.
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  4. GRUNNILL M, Arino J, McCarthy Z, Bragazzi NL, et al
    Modelling disease mitigation at mass gatherings: A case study of COVID-19 at the 2022 FIFA World Cup.
    PLoS Comput Biol. 2024;20:e1011018.
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    December 2023
  5. MULBERRY N, Rutherford AR, Colijn C
    Pneumococcal population dynamics: Investigating vaccine-induced changes through multiscale modelling.
    PLoS Comput Biol. 2023;19:e1011755.
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    October 2023
  6. ZHANG X, Lobinska G, Feldman M, Dekel E, et al
    Correction: A spatial vaccination strategy to reduce the risk of vaccine-resistant variants.
    PLoS Comput Biol. 2023;19:e1011608.
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    August 2023
  7. MENEZES A, Takahashi S, Routledge I, Metcalf CJE, et al
    serosim: An R package for simulating serological data arising from vaccination, epidemiological and antibody kinetics processes.
    PLoS Comput Biol. 2023;19:e1011384.
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  8. CLAIRON Q, Prague M, Planas D, Bruel T, et al
    Modeling the kinetics of the neutralizing antibody response against SARS-CoV-2 variants after several administrations of Bnt162b2.
    PLoS Comput Biol. 2023;19:e1011282.
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    October 2022
  9. MATSUYAMA R, Yamamoto T, Hayama Y, Omori R, et al
    Measuring impact of vaccination among wildlife: The case of bait vaccine campaigns for classical swine fever epidemic among wild boar in Japan.
    PLoS Comput Biol. 2022;18:e1010510.
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  10. ALVAREZ-ZUZEK LG, Zipfel CM, Bansal S
    Spatial clustering in vaccination hesitancy: The role of social influence and social selection.
    PLoS Comput Biol. 2022;18:e1010437.
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  11. LEWITUS E, Hoang J, Li Y, Bai H, et al
    Optimal sequence-based design for multi-antigen HIV-1 vaccines using minimally distant antigens.
    PLoS Comput Biol. 2022;18:e1010624.
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    September 2022
  12. LI Q, Huang Y
    Optimizing global COVID-19 vaccine allocation: An agent-based computational model of 148 countries.
    PLoS Comput Biol. 2022;18:e1010463.
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  13. WANG E, Chakraborty AK
    Design of immunogens for eliciting antibody responses that may protect against SARS-CoV-2 variants.
    PLoS Comput Biol. 2022;18:e1010563.
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    August 2022
  14. ZHANG X, Lobinska G, Feldman M, Dekel E, et al
    A spatial vaccination strategy to reduce the risk of vaccine-resistant variants.
    PLoS Comput Biol. 2022;18:e1010391.
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    July 2022
  15. LEMAITRE JC, Pasetto D, Zanon M, Bertuzzo E, et al
    Optimal control of the spatial allocation of COVID-19 vaccines: Italy as a case study.
    PLoS Comput Biol. 2022;18:e1010237.
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  16. HILL EM, Prosser NS, Ferguson E, Kaler J, et al
    Modelling livestock infectious disease control policy under differing social perspectives on vaccination behaviour.
    PLoS Comput Biol. 2022;18:e1010235.
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    May 2022
  17. GOZZI N, Chinazzi M, Davis JT, Mu K, et al
    Anatomy of the first six months of COVID-19 vaccination campaign in Italy.
    PLoS Comput Biol. 2022;18:e1010146.
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    April 2022
  18. WEERASURIYA CK, Harris RC, McQuaid CF, Gomez GB, et al
    Updating age-specific contact structures to match evolving demography in a dynamic mathematical model of tuberculosis vaccination.
    PLoS Comput Biol. 2022;18:e1010002.
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  19. MOLLA J, Ponce de Leon Chavez A, Hiraoka T, Ala-Nissila T, et al
    Adaptive and optimized COVID-19 vaccination strategies across geographical regions and age groups.
    PLoS Comput Biol. 2022;18:e1009974.
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  20. CONTI S, Ovchinnikov V, Faris JG, Chakraborty AK, et al
    Multiscale affinity maturation simulations to elicit broadly neutralizing antibodies against HIV.
    PLoS Comput Biol. 2022;18:e1009391.
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    March 2022
  21. SOUTO FERREIRA L, Canton O, da Silva RLP, Poloni S, et al
    Assessing the best time interval between doses in a two-dose vaccination regimen to reduce the number of deaths in an ongoing epidemic of SARS-CoV-2.
    PLoS Comput Biol. 2022;18:e1009978.
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    February 2022
  22. GAVISH N, Katriel G
    The role of childrens' vaccination for COVID-19-Pareto-optimal allocations of vaccines.
    PLoS Comput Biol. 2022;18:e1009872.
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  23. NAUNG MT, Martin E, Munro J, Mehra S, et al
    Global diversity and balancing selection of 23 leading Plasmodium falciparum candidate vaccine antigens.
    PLoS Comput Biol. 2022;18:e1009801.
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  24. LOCHEN A, Truscott JE, Croucher NJ
    Analysing pneumococcal invasiveness using Bayesian models of pathogen progression rates.
    PLoS Comput Biol. 2022;18:e1009389.
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    December 2021
  25. FAMULARE M, Wong W, Haque R, Platts-Mills JA, et al
    Multiscale model for forecasting Sabin 2 vaccine virus household and community transmission.
    PLoS Comput Biol. 2021;17:e1009690.
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  26. BAKER JJ, Mathy CJP, Schaletzky J
    A proposed workflow for proactive virus surveillance and prediction of variants for vaccine design.
    PLoS Comput Biol. 2021;17:e1009624.
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  27. MIURA F, Leung KY, Klinkenberg D, Ainslie KEC, et al
    Optimal vaccine allocation for COVID-19 in the Netherlands: A data-driven prioritization.
    PLoS Comput Biol. 2021;17:e1009697.
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    October 2021
  28. ZARNITSYNA VI, Akondy RS, Ahmed H, McGuire DJ, et al
    Dynamics and turnover of memory CD8 T cell responses following yellow fever vaccination.
    PLoS Comput Biol. 2021;17:e1009468.
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    June 2021
  29. GONCALVES BP, Procter SR, Clifford S, Koukounari A, et al
    Estimation of country-level incidence of early-onset invasive Group B Streptococcus disease in infants using Bayesian methods.
    PLoS Comput Biol. 2021;17:e1009001.
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