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Articles published in
Proc Natl Acad Sci U S A
    May 2024
  1. PATERSON RL, La Manna MP, Arena De Souza V, Walker A, et al
    An HLA-E-targeted TCR bispecific molecule redirects T cell immunity against Mycobacterium tuberculosis.
    Proc Natl Acad Sci U S A. 2024;121:e2318003121.
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  2. FACHI JL, Di Luccia B, Gilfillan S, Chang HW, et al
    Deficiency of IL-22-binding protein enhances the ability of the gut microbiota to protect against enteric pathogens.
    Proc Natl Acad Sci U S A. 2024;121:e2321836121.
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    April 2024
  3. IRACANE E, Arias-Sarda C, Maufrais C, Ene IV, et al
    Identification of an active RNAi pathway in Candida albicans.
    Proc Natl Acad Sci U S A. 2024;121:e2315926121.
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  4. CHEVEE V, Hullahalli K, Dailey KG, Guereca L, et al
    Temporal and spatial dynamics of Listeria monocytogenes central nervous system infection in mice.
    Proc Natl Acad Sci U S A. 2024;121:e2320311121.
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  5. DATTA M, Via LE, Dartois V, Weiner DM, et al
    Normalizing granuloma vasculature and matrix improves drug delivery and reduces bacterial burden in tuberculosis-infected rabbits.
    Proc Natl Acad Sci U S A. 2024;121:e2321336121.
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  6. FORTUNE SM
    The Titanic question in TB control: Should we worry about the bummock?
    Proc Natl Acad Sci U S A. 2024;121:e2403321121.
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    March 2024
  7. ROSAY T, Jimenez AG, Sperandio V
    Glucuronic acid confers colonization advantage to enteric pathogens.
    Proc Natl Acad Sci U S A. 2024;121:e2400226121.
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  8. KEITH M, Park de la Torriente A, Chalka A, Vallejo-Trujillo A, et al
    Predictive phage therapy for Escherichia coli urinary tract infections: Cocktail selection for therapy based on machine learning models.
    Proc Natl Acad Sci U S A. 2024;121:e2313574121.
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  9. PATTERSON B, Dinkele R, Gessner S, Koch A, et al
    Aerosolization of viable Mycobacterium tuberculosis bacilli by tuberculosis clinic attendees independent of sputum-Xpert Ultra status.
    Proc Natl Acad Sci U S A. 2024;121:e2314813121.
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  10. DAI R, Yang S, Pang T, Tian M, et al
    Identification of a negative-strand RNA virus with natural plant and fungal hosts.
    Proc Natl Acad Sci U S A. 2024;121:e2319582121.
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  11. SCHWARTZMAN JA, Lebreton F, Salamzade R, Shea T, et al
    Global diversity of enterococci and description of 18 previously unknown species.
    Proc Natl Acad Sci U S A. 2024;121:e2310852121.
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    February 2024
  12. PRESTEGARD JH
    A consensus structural motif for the capsular polysaccharide of Cryptococcus Neoformans by NMR/MD.
    Proc Natl Acad Sci U S A. 2024;121:e2322413121.
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  13. HARGETT AA, Azurmendi HF, Crawford CJ, Wear MP, et al
    The structure of a C. neoformans polysaccharide motif recognized by protective antibodies: A combined NMR and MD study.
    Proc Natl Acad Sci U S A. 2024;121:e2315733121.
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  14. KLINE SN, Orlando NA, Lee AJ, Wu MJ, et al
    Staphylococcus aureus proteases trigger eosinophil-mediated skin inflammation.
    Proc Natl Acad Sci U S A. 2024;121:e2309243121.
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    January 2024
  15. LU J, Liu X, Li X, Li H, et al
    Copper regulates the host innate immune response against bacterial infection via activation of ALPK1 kinase.
    Proc Natl Acad Sci U S A. 2024;121:e2311630121.
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  16. HULLAHALLI K, Dailey KG, Hasegawa Y, Johnson WE, et al
    Reverse transcriptase inhibitors prevent liver abscess formation during Escherichia coli bloodstream infection.
    Proc Natl Acad Sci U S A. 2024;121:e2319162121.
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  17. KALINKA E, Brody SM, Swafford AJM, Medina EM, et al
    Genetic transformation of the frog-killing chytrid fungus Batrachochytrium dendrobatidis.
    Proc Natl Acad Sci U S A. 2024;121:e2317928121.
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  18. PARSONS JB, Sidders AE, Velez AZ, Hanson BM, et al
    In-patient evolution of a high-persister Escherichia coli strain with reduced in vivo antibiotic susceptibility.
    Proc Natl Acad Sci U S A. 2024;121:e2314514121.
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  19. SINHA R, LeVeque RM, Callahan SM, Chatterjee S, et al
    Gut metabolite L-lactate supports Campylobacter jejuni population expansion during acute infection.
    Proc Natl Acad Sci U S A. 2024;121:e2316540120.
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  20. CHUGH S, Tiwari P, Suri C, Gupta SK, et al
    Polyphosphate kinase-1 regulates bacterial and host metabolic pathways involved in pathogenesis of Mycobacterium tuberculosis.
    Proc Natl Acad Sci U S A. 2024;121:e2309664121.
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  21. LIU Y, McQuillen EA, Rana PSJB, Gloag ES, et al
    A bacterial pigment provides cross-species protection from H(2)O(2)- and neutrophil-mediated killing.
    Proc Natl Acad Sci U S A. 2024;121:e2312334121.
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  22. PHELPS GA, Cheramie MN, Fernando DM, Selchow P, et al
    Development of 2nd generation aminomethyl spectinomycins that overcome native efflux in Mycobacterium abscessus.
    Proc Natl Acad Sci U S A. 2024;121:e2314101120.
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  23. CHHABRA G, Ahmad N
    Molecular chaos under the skin: Epigenetic reprogramming in hidradenitis suppurativa.
    Proc Natl Acad Sci U S A. 2024;121:e2319797121.
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    December 2023
  24. HULLAHALLI K, Dailey KG, Hasegawa Y, Torres E, et al
    Genetic and immune determinants of E. coli liver abscess formation.
    Proc Natl Acad Sci U S A. 2023;120:e2310053120.
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  25. SKAAR EP
    Biogeography of the genus Staphylococci on human skin.
    Proc Natl Acad Sci U S A. 2023;120:e2318509120.
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  26. JIN L, Chen Y, Muzaffar S, Li C, et al
    Epigenetic switch reshapes epithelial progenitor cell signatures and drives inflammatory pathogenesis in hidradenitis suppurativa.
    Proc Natl Acad Sci U S A. 2023;120:e2315096120.
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    November 2023
  27. FATTINGER SA, Maurer L, Geiser P, Bernard EM, et al
    Gasdermin D is the only Gasdermin that provides protection against acute Salmonella gut infection in mice.
    Proc Natl Acad Sci U S A. 2023;120:e2315503120.
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  28. HORTON KC, Richards AS, Emery JC, Esmail H, et al
    Reevaluating progression and pathways following Mycobacterium tuberculosis infection within the spectrum of tuberculosis.
    Proc Natl Acad Sci U S A. 2023;120:e2221186120.
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  29. MURRAY GGR, Hossain ASMM, Miller EL, Bruchmann S, et al
    The emergence and diversification of a zoonotic pathogen from within the microbiota of intensively farmed pigs.
    Proc Natl Acad Sci U S A. 2023;120:e2307773120.
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  30. PRINCE J, Jones AD 3rd
    Heterogenous biofilm mass-transport model replicates periphery sequestration of antibiotics in Pseudomonas aeruginosa PAO1 microcolonies.
    Proc Natl Acad Sci U S A. 2023;120:e2312995120.
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  31. JOGLEKAR P, Conlan S, Lee-Lin SQ, Deming C, et al
    Integrated genomic and functional analyses of human skin-associated Staphylococcus reveal extensive inter- and intra-species diversity.
    Proc Natl Acad Sci U S A. 2023;120:e2310585120.
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    October 2023
  32. KOBRAS CM, Monteith W, Somerville S, Delaney JM, et al
    Loss of Pde1 function acts as an evolutionary gateway to penicillin resistance in Streptococcus pneumoniae.
    Proc Natl Acad Sci U S A. 2023;120:e2308029120.
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  33. HIRAMATSU Y, Nishida T, Ota N, Tamaki Y, et al
    DAT, deacylating autotransporter toxin, from Bordetella parapertussis demyristoylates Galpha(i) GTPases and contributes to cough.
    Proc Natl Acad Sci U S A. 2023;120:e2308260120.
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    September 2023
  34. HULLAHALLI K, Dailey KG, Waldor MK
    Innate immune responses yield tissue-specific bottlenecks that scale with pathogen dose.
    Proc Natl Acad Sci U S A. 2023;120:e2309151120.
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    August 2023
  35. LIANG J, Liu F, Xu P, Shangguan W, et al
    Molecular recognition of trehalose and trehalose analogues by Mycobacterium tuberculosis LpqY-SugABC.
    Proc Natl Acad Sci U S A. 2023;120:e2307625120.
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    July 2023
  36. KELLY SD, Ovchinnikova OG, Muller F, Steffen M, et al
    Identification of a second glycoform of the clinically prevalent O1 antigen from Klebsiella pneumoniae.
    Proc Natl Acad Sci U S A. 2023;120:e2301302120.
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  37. LIANG Q, Ma C, Crowley SM, Allaire JM, et al
    Sialic acid plays a pivotal role in licensing Citrobacter rodentium's transition from the intestinal lumen to a mucosal adherent niche.
    Proc Natl Acad Sci U S A. 2023;120:e2301115120.
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  38. VARGAS R JR, Luna MJ, Freschi L, Marin M, et al
    Phase variation as a major mechanism of adaptation in Mycobacterium tuberculosis complex.
    Proc Natl Acad Sci U S A. 2023;120:e2301394120.
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  39. MARCINKIEWICZ AL, Brangulis K, Dupuis AP 2nd, Hart TM, et al
    Structural evolution of an immune evasion determinant shapes pathogen host tropism.
    Proc Natl Acad Sci U S A. 2023;120:e2301549120.
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  40. ZHANG D, Yin F, Qin Q, Qiao L, et al
    Molecular responses during bacterial filamentation reveal inhibition methods of drug-resistant bacteria.
    Proc Natl Acad Sci U S A. 2023;120:e2301170120.
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    June 2023
  41. PAN F, Zhu M, Liang Y, Yuan C, et al
    Membrane vesicle delivery of a streptococcal M protein disrupts the blood-brain barrier by inducing autophagic endothelial cell death.
    Proc Natl Acad Sci U S A. 2023;120:e2219435120.
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  42. GONG Y, Wei C, Wang J, Mu N, et al
    Structure of the priming arabinosyltransferase AftA required for AG biosynthesis of Mycobacterium tuberculosis.
    Proc Natl Acad Sci U S A. 2023;120:e2302858120.
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  43. BOAMAH D, Gilmore MC, Bourget S, Ghosh A, et al
    Peptidoglycan deacetylation controls type IV secretion and the intracellular survival of the bacterial pathogen Legionella pneumophila.
    Proc Natl Acad Sci U S A. 2023;120:e2119658120.
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    May 2023
  44. STEIERT B, Icardi CM, Faris R, McCaslin PN, et al
    The Chlamydia trachomatis type III-secreted effector protein CteG induces centrosome amplification through interactions with centrin-2.
    Proc Natl Acad Sci U S A. 2023;120:e2303487120.
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  45. O'NEAL AJ, Singh N, Rolandelli A, Laukaitis HJ, et al
    Croquemort elicits activation of the immune deficiency pathway in ticks.
    Proc Natl Acad Sci U S A. 2023;120:e2208673120.
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  46. LEWIN GR, Kapur A, Cornforth DM, Duncan RP, et al
    Application of a quantitative framework to improve the accuracy of a bacterial infection model.
    Proc Natl Acad Sci U S A. 2023;120:e2221542120.
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  47. ICHO S, Ward JS, Tam J, Kociolek LK, et al
    Intestinal bile acids provide a surmountable barrier against C. difficile TcdB-induced disease pathogenesis.
    Proc Natl Acad Sci U S A. 2023;120:e2301252120.
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    April 2023
  48. CHEN X, Gula H, Pius T, Ou C, et al
    Immunoglobulin G subclasses confer protection against Staphylococcus aureus bloodstream dissemination through distinct mechanisms in mouse models.
    Proc Natl Acad Sci U S A. 2023;120:e2220765120.
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    March 2023
  49. CHUN YY, Tan KS, Yu L, Pang M, et al
    Influence of glycan structure on the colonization of Streptococcus pneumoniae on human respiratory epithelial cells.
    Proc Natl Acad Sci U S A. 2023;120:e2213584120.
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  50. LEONARD AC, Goncheva MI, Gilbert SE, Shareefdeen H, et al
    Autolysin-mediated peptidoglycan hydrolysis is required for the surface display of Staphylococcus aureus cell wall-anchored proteins.
    Proc Natl Acad Sci U S A. 2023;120:e2301414120.
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  51. KAKADE P, Sircaik S, Maufrais C, Ene IV, et al
    Aneuploidy and gene dosage regulate filamentation and host colonization by Candida albicans.
    Proc Natl Acad Sci U S A. 2023;120:e2218163120.
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  52. STENSETH NC, Bramanti B, Buntgen U, Fell HG, et al
    Reply to Alfani: Reconstructing past plague ecology to understand human history.
    Proc Natl Acad Sci U S A. 2023;120:e2300760120.
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    February 2023
  53. DICKEY SW, Burgin DJ, Huang S, Maguire D, et al
    Two transporters cooperate to secrete amphipathic peptides from the cytoplasmic and membranous milieus.
    Proc Natl Acad Sci U S A. 2023;120:e2211689120.
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  54. LAKE MA, Adams KN, Nie F, Fowler E, et al
    The human proton pump inhibitors inhibit Mycobacterium tuberculosis rifampicin efflux and macrophage-induced rifampicin tolerance.
    Proc Natl Acad Sci U S A. 2023;120:e2215512120.
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  55. FAN J, Hale VL, Lelieveld LT, Whitworth LJ, et al
    Gaucher disease protects against tuberculosis.
    Proc Natl Acad Sci U S A. 2023;120:e2217673120.
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  56. LAMON G, Lends A, Valsecchi I, Wong SSW, et al
    Solid-state NMR molecular snapshots of Aspergillus fumigatus cell wall architecture during a conidial morphotype transition.
    Proc Natl Acad Sci U S A. 2023;120:e2212003120.
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    January 2023
  57. MACDONALD R, Mahoney BJ, Soule J, Goring AK, et al
    The Shr receptor from Streptococcus pyogenes uses a cap and release mechanism to acquire heme-iron from human hemoglobin.
    Proc Natl Acad Sci U S A. 2023;120:e2211939120.
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  58. BROWN CM, Corey RA, Grelard A, Gao Y, et al
    Supramolecular organization and dynamics of mannosylated phosphatidylinositol lipids in the mycobacterial plasma membrane.
    Proc Natl Acad Sci U S A. 2023;120:e2212755120.
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  59. GUSA A, Yadav V, Roth C, Williams JD, et al
    Genome-wide analysis of heat stress-stimulated transposon mobility in the human fungal pathogen Cryptococcus deneoformans.
    Proc Natl Acad Sci U S A. 2023;120:e2209831120.
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  60. SHAHIN M, Sheppard D, Raynaud C, Berry JL, et al
    Characterization of a glycan-binding complex of minor pilins completes the analysis of Streptococcus sanguinis type 4 pili subunits.
    Proc Natl Acad Sci U S A. 2023;120:e2216237120.
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  61. WACKER T, Helmstetter N, Wilson D, Fisher MC, et al
    Two-speed genome evolution drives pathogenicity in fungal pathogens of animals.
    Proc Natl Acad Sci U S A. 2023;120:e2212633120.
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  62. SEPHTON-CLARK P, McConnell SA, Grossman N, Baker RP, et al
    Similar evolutionary trajectories in an environmental Cryptococcus neoformans isolate after human and murine infection.
    Proc Natl Acad Sci U S A. 2023;120:e2217111120.
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  63. O'BOYLE N, Douce GR, Farrell G, Rattray NJW, et al
    Distinct ecological fitness factors coordinated by a conserved Escherichia coli regulator during systemic bloodstream infection.
    Proc Natl Acad Sci U S A. 2023;120:e2212175120.
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  64. BERTRAM T, Reimers D, Lory NC, Schmidt C, et al
    Kidney-resident innate-like memory gammadelta T cells control chronic Staphylococcus aureus infection of mice.
    Proc Natl Acad Sci U S A. 2023;120:e2210490120.
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    December 2022
  65. RYCKMAN TS, Dowdy DW, Kendall EA
    Infectious and clinical tuberculosis trajectories: Bayesian modeling with case finding implications.
    Proc Natl Acad Sci U S A. 2022;119:e2211045119.
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  66. STENSETH NC, Tao Y, Zhang C, Bramanti B, et al
    No evidence for persistent natural plague reservoirs in historical and modern Europe.
    Proc Natl Acad Sci U S A. 2022;119:e2209816119.
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  67. IBBERSON CB, Barraza JP, Holmes AL, Cao P, et al
    Precise spatial structure impacts antimicrobial susceptibility of S. aureus in polymicrobial wound infections.
    Proc Natl Acad Sci U S A. 2022;119:e2212340119.
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  68. YEBRA G, Harling-Lee JD, Lycett S, Aarestrup FM, et al
    Multiclonal human origin and global expansion of an endemic bacterial pathogen of livestock.
    Proc Natl Acad Sci U S A. 2022;119:e2211217119.
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  69. UPADHYAY I, Li S, Ptacek G, Seo H, et al
    A polyvalent multiepitope protein cross-protects against Vibrio cholerae infection in rabbit colonization and passive protection models.
    Proc Natl Acad Sci U S A. 2022;119:e2202938119.
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    November 2022
  70. LI X, Anderson DE, Chang YY, Jarnik M, et al
    VpdC is a ubiquitin-activated phospholipase effector that regulates Legionella vacuole expansion during infection.
    Proc Natl Acad Sci U S A. 2022;119:e2209149119.
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  71. MITSUNAKA S, Yamazaki K, Pramono AK, Ikeuchi M, et al
    Synthetic engineering and biological containment of bacteriophages.
    Proc Natl Acad Sci U S A. 2022;119:e2206739119.
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  72. JIN L, Jiang BG, Yin Y, Guo J, et al
    Interference with LTbetaR signaling by tick saliva facilitates transmission of Lyme disease spirochetes.
    Proc Natl Acad Sci U S A. 2022;119:e2208274119.
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  73. PENG V, Cao S, Trsan T, Bando JK, et al
    Ornithine decarboxylase supports ILC3 responses in infectious and autoimmune colitis through positive regulation of IL-22 transcription.
    Proc Natl Acad Sci U S A. 2022;119:e2214900119.
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  74. STEINIG E, Aglua I, Duchene S, Meehan MT, et al
    Phylodynamic signatures in the emergence of community-associated MRSA.
    Proc Natl Acad Sci U S A. 2022;119:e2204993119.
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  75. CONNOLLY JPR, Turner NCA, Serrano E, Rimbi PT, et al
    Control of resistance against bacteriophage killing by a metabolic regulator in meningitis-associated Escherichia coli.
    Proc Natl Acad Sci U S A. 2022;119:e2210299119.
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  76. KHETRAPAL V, Ayub Ow Yong L, Lim SJM, Chen SL, et al
    Development of mass allelic exchange, a technique to enable sexual genetics in Escherichia coli.
    Proc Natl Acad Sci U S A. 2022;119:e2105458119.
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  77. HUANG CC, Trevisi L, Becerra MC, Calderon RI, et al
    Spatial scale of tuberculosis transmission in Lima, Peru.
    Proc Natl Acad Sci U S A. 2022;119:e2207022119.
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    October 2022
  78. CHENG M, Xu J, Ding K, Zhang J, et al
    Attenuation of relapsing fever neuroborreliosis in mice by IL-17A blockade.
    Proc Natl Acad Sci U S A. 2022;119:e2205460119.
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  79. CANAS JJ, Liang D, Saxena V, Hooks J, et al
    Human neutrophil peptides 1-3 protect the murine urinary tract from uropathogenic Escherichia coli challenge.
    Proc Natl Acad Sci U S A. 2022;119:e2206515119.
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  80. CROWE AM, Krekhno JMC, Brown KL, Kulkarni JA, et al
    The unusual convergence of steroid catabolic pathways in Mycobacterium abscessus.
    Proc Natl Acad Sci U S A. 2022;119:e2207505119.
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    September 2022
  81. MANLEY OM, Phan HN, Stewart AK, Mosley DA, et al
    Self-sacrificial tyrosine cleavage by an Fe:Mn oxygenase for the biosynthesis of para-aminobenzoate in Chlamydia trachomatis.
    Proc Natl Acad Sci U S A. 2022;119:e2210908119.
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  82. WONG JLC, David S, Sanchez-Garrido J, Woo JZ, et al
    Recurrent emergence of Klebsiella pneumoniae carbapenem resistance mediated by an inhibitory ompK36 mRNA secondary structure.
    Proc Natl Acad Sci U S A. 2022;119:e2203593119.
    >> Share

  83. ROGAWSKI MCQUADE ET, Brennhofer SA, Elwood SE, McMurry TL, et al
    Frequency of bystander exposure to antibiotics for enteropathogenic bacteria among young children in low-resource settings.
    Proc Natl Acad Sci U S A. 2022;119:e2208972119.
    >> Share

  84. WILLIS JA, Cheburkanov V, Chen S, Soares JM, et al
    Breaking down antibiotic resistance in methicillin-resistant Staphylococcus aureus: Combining antimicrobial photodynamic and antibiotic treatments.
    Proc Natl Acad Sci U S A. 2022;119:e2208378119.
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    August 2022
  85. POLLOCK GL, Grishin AM, Giogha C, Gan J, et al
    Targeting of microvillus protein Eps8 by the NleH effector kinases from enteropathogenic E. coli.
    Proc Natl Acad Sci U S A. 2022;119:e2204332119.
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  86. LEISMAN DE, Privratsky JR, Lehman JR, Abraham MN, et al
    Angiotensin II enhances bacterial clearance via myeloid signaling in a murine sepsis model.
    Proc Natl Acad Sci U S A. 2022;119:e2211370119.
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  87. SONG CH, Kim YH, Naskar M, Hayes BW, et al
    Lactobacillus crispatus Limits Bladder Uropathogenic E. coli Infection by Triggering a Host Type I Interferon Response.
    Proc Natl Acad Sci U S A. 2022;119:e2117904119.
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  88. ZHAO A, Bodine SP, Xie Q, Wang B, et al
    Reconstitution of the S. aureus agr quorum sensing pathway reveals a direct role for the integral membrane protease MroQ in pheromone biosynthesis.
    Proc Natl Acad Sci U S A. 2022;119:e2202661119.
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  89. XU Y, Li C, Ma X, Tuo W, et al
    Long wavelength-emissive Ru(II) metallacycle-based photosensitizer assisting in vivo bacterial diagnosis and antibacterial treatment.
    Proc Natl Acad Sci U S A. 2022;119:e2209904119.
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  90. XUE J, Lin Y, Oo D, Zhang J, et al
    Lymph-derived chemokines direct early neutrophil infiltration in the lymph nodes upon Staphylococcus aureus skin infection.
    Proc Natl Acad Sci U S A. 2022;119:e2111726119.
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  91. ZWACK EE, Chen Z, Devlin JC, Li Z, et al
    Staphylococcus aureus induces a muted host response in human blood that blunts the recruitment of neutrophils.
    Proc Natl Acad Sci U S A. 2022;119:e2123017119.
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    July 2022
  92. FAIT A, Seif Y, Mikkelsen K, Poudel S, et al
    Adaptive laboratory evolution and independent component analysis disentangle complex vancomycin adaptation trajectories.
    Proc Natl Acad Sci U S A. 2022;119:e2118262119.
    >> Share

  93. STEVENS CM, Babii SO, Pandya AN, Li W, et al
    Proton transfer activity of the reconstituted Mycobacterium tuberculosis MmpL3 is modulated by substrate mimics and inhibitors.
    Proc Natl Acad Sci U S A. 2022;119:e2113963119.
    >> Share

  94. DURU N, Pawar NR, Martin EW, Buzza MS, et al
    Selective targeting of metastatic ovarian cancer using an engineered anthrax prodrug activated by membrane-anchored serine proteases.
    Proc Natl Acad Sci U S A. 2022;119:e2201423119.
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    June 2022

  95. Correction for Chiner-Oms et al., Gene evolutionary trajectories in Mycobacterium tuberculosis reveal temporal signs of selection.
    Proc Natl Acad Sci U S A. 2022;119:e2208725119.
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  96. ANAHTAR M, Chan LW, Ko H, Rao A, et al
    Host protease activity classifies pneumonia etiology.
    Proc Natl Acad Sci U S A. 2022;119:e2121778119.
    >> Share

  97. SIEWERT LK, Korotaev A, Sedzicki J, Fromm K, et al
    Identification of the Bartonella autotransporter CFA as a protective antigen and hypervariable target of neutralizing antibodies in mice.
    Proc Natl Acad Sci U S A. 2022;119:e2202059119.
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  98. KAMATH PL
    Conserving rhinoceros in the face of disease.
    Proc Natl Acad Sci U S A. 2022;119:e2206438119.
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  99. TSUJIHANA K, Tanegashima K, Santo Y, Yamada H, et al
    Circadian protection against bacterial skin infection by epidermal CXCL14-mediated innate immunity.
    Proc Natl Acad Sci U S A. 2022;119:e2116027119.
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  100. DWYER R, Goosen W, Buss P, Kedward S, et al
    Epidemiology of Mycobacterium bovis infection in free-ranging rhinoceros in Kruger National Park, South Africa.
    Proc Natl Acad Sci U S A. 2022;119:e2120656119.
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  101. NARCISO AR, Iovino F, Thorsdottir S, Mellroth P, et al
    Membrane particles evoke a serotype-independent cross-protection against pneumococcal infection that is dependent on the conserved lipoproteins MalX and PrsA.
    Proc Natl Acad Sci U S A. 2022;119:e2122386119.
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    May 2022
  102. SLAVIN P, Sebbane F
    Emergence and spread of ancestral Yersinia pestis in Late-Neolithic and Bronze-Age Eurasia, ca. 5,000 to 1,500 y B.P.
    Proc Natl Acad Sci U S A. 2022;119:e2204044119.
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    April 2022
  103. ANDRADES VALTUENA A, Neumann GU, Spyrou MA, Musralina L, et al
    Stone Age Yersinia pestis genomes shed light on the early evolution, diversity, and ecology of plague.
    Proc Natl Acad Sci U S A. 2022;119:e2116722119.
    >> Share

  104. CHINER-OMS A, Lopez MG, Moreno-Molina M, Furio V, et al
    Gene evolutionary trajectories in Mycobacterium tuberculosis reveal temporal signs of selection.
    Proc Natl Acad Sci U S A. 2022;119:e2113600119.
    >> Share

  105. KOH EI, Oluoch PO, Ruecker N, Proulx MK, et al
    Chemical-genetic interaction mapping links carbon metabolism and cell wall structure to tuberculosis drug efficacy.
    Proc Natl Acad Sci U S A. 2022;119:e2201632119.
    >> Share

  106. AMOR DR, Gore J
    Fast growth can counteract antibiotic susceptibility in shaping microbial community resilience to antibiotics.
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  107. HERNANDO-AMADO S, Laborda P, Valverde JR, Martinez JL, et al
    Mutational background influences P. aeruginosa ciprofloxacin resistance evolution but preserves collateral sensitivity robustness.
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  108. DE BEI O, Marchetti M, Ronda L, Gianquinto E, et al
    Cryo-EM structures of staphylococcal IsdB bound to human hemoglobin reveal the process of heme extraction.
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  109. LAUGHLIN ZT, Nandi S, Dey D, Zelinskaya N, et al
    50S subunit recognition and modification by the Mycobacterium tuberculosis ribosomal RNA methyltransferase TlyA.
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    March 2022
  110. PEREIRA MJ, Wager B, Garrigues RJ, Gerlach E, et al
    Lipoproteome screening of the Lyme disease agent identifies inhibitors of antibody-mediated complement killing.
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  111. SUN X, Chi H
    Tregs tango with killer cells in acute infection.
    Proc Natl Acad Sci U S A. 2022;119:e2202400119.
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  112. CHEN J, Byun H, Liu R, Jung IJ, et al
    A commensal-encoded genotoxin drives restriction of Vibrio cholerae colonization and host gut microbiome remodeling.
    Proc Natl Acad Sci U S A. 2022;119:e2121180119.
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  113. WANG X, Li P, Singh AK, Zhang X, et al
    Remodeling Yersinia pseudotuberculosis to generate a highly immunogenic outer membrane vesicle vaccine against pneumonic plague.
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  114. OSMAN MM, Shanahan JK, Chu F, Takaki KK, et al
    The C terminus of the mycobacterium ESX-1 secretion system substrate ESAT-6 is required for phagosomal membrane damage and virulence.
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  115. DOLINA JS, Lee J, Moore EL, Hope JL, et al
    Developmentally distinct CD4(+) Treg lineages shape the CD8(+) T cell response to acute Listeria infection.
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  116. KRISHNAN M, Choi J, Jang A, Choi S, et al
    Molecular mechanism underlying the TLR4 antagonistic and antiseptic activities of papiliocin, an insect innate immune response molecule.
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    February 2022
  117. CHADDA A, Jensen D, Tomko EJ, Ruiz Manzano A, et al
    Mycobacterium tuberculosis DNA repair helicase UvrD1 is activated by redox-dependent dimerization via a 2B domain cysteine.
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  118. TUFFS SW, Goncheva MI, Xu SX, Craig HC, et al
    Superantigens promote Staphylococcus aureus bloodstream infection by eliciting pathogenic interferon-gamma production.
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  119. WANG L, Asare E, Shetty AC, Sanchez-Tumbaco F, et al
    Multiple genetic paths including massive gene amplification allow Mycobacterium tuberculosis to overcome loss of ESX-3 secretion system substrates.
    Proc Natl Acad Sci U S A. 2022;119.
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  120. MEHDIRATTA K, Singh S, Sharma S, Bhosale RS, et al
    Kupyaphores are zinc homeostatic metallophores required for colonization of Mycobacterium tuberculosis.
    Proc Natl Acad Sci U S A. 2022;119.
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  121. SUN S, Roth C, Floyd Averette A, Magwene PM, et al
    Epistatic genetic interactions govern morphogenesis during sexual reproduction and infection in a global human fungal pathogen.
    Proc Natl Acad Sci U S A. 2022;119.
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  122. COOPER C, Peterson EJR, Bailo R, Pan M, et al
    MadR mediates acyl CoA-dependent regulation of mycolic acid desaturation in mycobacteria.
    Proc Natl Acad Sci U S A. 2022;119.
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  123. ERCOLI MF, Luu DD, Rim EY, Shigenaga A, et al
    Plant immunity: Rice XA21-mediated resistance to bacterial infection.
    Proc Natl Acad Sci U S A. 2022;119.
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  124. SORGELOOS F, Peeters M, Hayashi Y, Borghese F, et al
    A case of convergent evolution: Several viral and bacterial pathogens hijack RSK kinases through a common linear motif.
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    January 2022
  125. CHEN X, Schneewind O, Missiakas D
    Engineered human antibodies for the opsonization and killing of Staphylococcus aureus.
    Proc Natl Acad Sci U S A. 2022;119.
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  126. VAN HAUWERMEIREN F, Van Opdenbosch N, Van Gorp H, de Vasconcelos N, et al
    Bacillus anthracis induces NLRP3 inflammasome activation and caspase-8-mediated apoptosis of macrophages to promote lethal anthrax.
    Proc Natl Acad Sci U S A. 2022;119.
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  127. LEWIN GR, Stocke KS, Lamont RJ, Whiteley M, et al
    A quantitative framework reveals traditional laboratory growth is a highly accurate model of human oral infection.
    Proc Natl Acad Sci U S A. 2022;119.
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  128. DAS S, Saqib M, Meng RC, Chittur SV, et al
    Hemochromatosis drives acute lethal intestinal responses to hyperyersiniabactin-producing Yersinia pseudotuberculosis.
    Proc Natl Acad Sci U S A. 2022;119.
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  129. ZHANG Y, Fu J, Liu S, Wang L, et al
    Coxiella burnetii inhibits host immunity by a protein phosphatase adapted from glycolysis.
    Proc Natl Acad Sci U S A. 2022;119.
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    December 2021
  130. LI J, Claudi B, Fanous J, Chicherova N, et al
    Tissue compartmentalization enables Salmonella persistence during chemotherapy.
    Proc Natl Acad Sci U S A. 2021;118.
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  131. MARGOLIS SR, Dietzen PA, Hayes BM, Wilson SC, et al
    The cyclic dinucleotide 2'3'-cGAMP induces a broad antibacterial and antiviral response in the sea anemone Nematostella vectensis.
    Proc Natl Acad Sci U S A. 2021;118.
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  132. WOLINSKA KW, Vannier N, Thiergart T, Pickel B, et al
    Tryptophan metabolism and bacterial commensals prevent fungal dysbiosis in Arabidopsis roots.
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    November 2021
  133. MARTIN MJ, Corey BW, Sannio F, Hall LR, et al
    Anatomy of an extensively drug-resistant Klebsiella pneumoniae outbreak in Tuscany, Italy.
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  134. MONTGOMERY MG, Petri J, Spikes TE, Walker JE, et al
    Structure of the ATP synthase from Mycobacterium smegmatis provides targets for treating tuberculosis.
    Proc Natl Acad Sci U S A. 2021;118.
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  135. ALQARZAEE AA, Chaudhari SS, Islam MM, Kumar V, et al
    Staphylococcal ClpXP protease targets the cellular antioxidant system to eliminate fitness-compromised cells in stationary phase.
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  136. BARNIER JP, Meyer J, Kolappan S, Bouzinba-Segard H, et al
    The minor pilin PilV provides a conserved adhesion site throughout the antigenically variable meningococcal type IV pilus.
    Proc Natl Acad Sci U S A. 2021;118.
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  137. SALAMAGA B, Kong L, Pasquina-Lemonche L, Lafage L, et al
    Demonstration of the role of cell wall homeostasis in Staphylococcus aureus growth and the action of bactericidal antibiotics.
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  138. PRICE SL, Vadyvaloo V, DeMarco JK, Brady A, et al
    Yersiniabactin contributes to overcoming zinc restriction during Yersinia pestis infection of mammalian and insect hosts.
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    October 2021
  139. GRISON CM, Lambey P, Jeannot S, Del Nero E, et al
    Molecular insights into mechanisms of GPCR hijacking by Staphylococcus aureus.
    Proc Natl Acad Sci U S A. 2021;118.
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  140. Correction for Whitworth et al., Elevated cerebrospinal fluid cytokine levels in tuberculous meningitis predict survival in response to dexamethasone.
    Proc Natl Acad Sci U S A. 2021;118.
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  141. YU HB, Yang H, Allaire JM, Ma C, et al
    Vasoactive intestinal peptide promotes host defense against enteric pathogens by modulating the recruitment of group 3 innate lymphoid cells.
    Proc Natl Acad Sci U S A. 2021;118.
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  142. SAECKER RM, Chen J, Chiu CE, Malone B, et al
    Structural origins of Escherichia coli RNA polymerase open promoter complex stability.
    Proc Natl Acad Sci U S A. 2021;118.
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  143. LOPEZ-PEREZ M, Jayakumar JM, Grant TA, Zaragoza-Solas A, et al
    Ecological diversification reveals routes of pathogen emergence in endemic Vibrio vulnificus populations.
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    September 2021
  144. BARBIERI R
    Origin, transmission, and evolution of plague over 400 y in Europe.
    Proc Natl Acad Sci U S A. 2021;118.
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  145. KESHARI RS, Popescu NI, Silasi R, Regmi G, et al
    Complement C5 inhibition protects against hemolytic anemia and acute kidney injury in anthrax peptidoglycan-induced sepsis in baboons.
    Proc Natl Acad Sci U S A. 2021;118.
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  146. PEI S, Liljeros F, Shaman J
    Identifying asymptomatic spreaders of antimicrobial-resistant pathogens in hospital settings.
    Proc Natl Acad Sci U S A. 2021;118.
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  147. BRAMANTI B, Wu Y, Yang R, Cui Y, et al
    Assessing the origins of the European Plagues following the Black Death: A synthesis of genomic, historical, and ecological information.
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    August 2021
  148. LUIZET JB, Raymond J, Lacerda TLS, Barbieux E, et al
    The Brucella effector BspL targets the ER-associated degradation (ERAD) pathway and delays bacterial egress from infected cells.
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  149. KADRY NA, Porsch EA, Shen H, St Geme JW 3rd, et al
    Immunization with HMW1 and HMW2 adhesins protects against colonization by heterologous strains of nontypeable Haemophilus influenzae.
    Proc Natl Acad Sci U S A. 2021;118.
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  150. VINCENT CM, Dionne MS
    Disparate regulation of IMD signaling drives sex differences in infection pathology in Drosophila melanogaster.
    Proc Natl Acad Sci U S A. 2021;118.
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  151. SHRESTHA E, Coulter JB, Guzman W, Ozbek B, et al
    Oncogenic gene fusions in nonneoplastic precursors as evidence that bacterial infection can initiate prostate cancer.
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    July 2021
  152. SUN W, Ma X, Wang H, Du Y, et al
    MYO1F regulates antifungal immunity by regulating acetylation of microtubules.
    Proc Natl Acad Sci U S A. 2021;118.
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  153. YANG WH, Westman JS, Heithoff DM, Sperandio M, et al
    Neu3 neuraminidase induction triggers intestinal inflammation and colitis in a model of recurrent human food-poisoning.
    Proc Natl Acad Sci U S A. 2021;118.
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  154. CHEN KW, Demarco B, Ramos S, Heilig R, et al
    RIPK1 activates distinct gasdermins in macrophages and neutrophils upon pathogen blockade of innate immune signaling.
    Proc Natl Acad Sci U S A. 2021;118.
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    June 2021
  155. WU C, Chen YW, Scheible M, Chang C, et al
    Genetic and molecular determinants of polymicrobial interactions in Fusobacterium nucleatum.
    Proc Natl Acad Sci U S A. 2021;118.
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  156. YAN Q, Zhang W, Lin M, Teymournejad O, et al
    Iron robbery by intracellular pathogen via bacterial effector-induced ferritinophagy.
    Proc Natl Acad Sci U S A. 2021;118.
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    May 2021
  157. LOFFREDO MR, Savini F, Bobone S, Casciaro B, et al
    Inoculum effect of antimicrobial peptides.
    Proc Natl Acad Sci U S A. 2021;118.
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  158. MASISON J, Beezley J, Mei Y, Ribeiro H, et al
    A modular computational framework for medical digital twins.
    Proc Natl Acad Sci U S A. 2021;118.
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  159. IM H, Hwang SH, Kim BS, Choi SH, et al
    Pathogenic potential assessment of the Shiga toxin-producing Escherichia coli by a source attribution-considered machine learning model.
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  160. ZHANG W, Lin M, Yan Q, Budachetri K, et al
    An intracellular nanobody targeting T4SS effector inhibits Ehrlichia infection.
    Proc Natl Acad Sci U S A. 2021;118.
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    April 2021
  161. DONG W, Nie X, Zhu H, Liu Q, et al
    Mycobacterial fatty acid catabolism is repressed by FdmR to sustain lipogenesis and virulence.
    Proc Natl Acad Sci U S A. 2021;118.
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  162. KOBAYASHI J, Kawakubo M, Fujii C, Arisaka N, et al
    Cholestenone functions as an antibiotic against Helicobacter pylori by inhibiting biosynthesis of the cell wall component CGL.
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  163. SAMPERIO VENTAYOL P, Geiser P, Di Martino ML, Florbrant A, et al
    Bacterial detection by NAIP/NLRC4 elicits prompt contractions of intestinal epithelial cell layers.
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  164. LE VOYER T, Neehus AL, Yang R, Ogishi M, et al
    Inherited deficiency of stress granule ZNFX1 in patients with monocytosis and mycobacterial disease.
    Proc Natl Acad Sci U S A. 2021;118.
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    March 2021
  165. ANGST DC, Tepekule B, Sun L, Bogos B, et al
    Comparing treatment strategies to reduce antibiotic resistance in an in vitro epidemiological setting.
    Proc Natl Acad Sci U S A. 2021;118.
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  166. RIMBARA E, Suzuki M, Matsui H, Nakamura M, et al
    Isolation and characterization of Helicobacter suis from human stomach.
    Proc Natl Acad Sci U S A. 2021;118.
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  167. LU EY, Chen HH, Zhao H, Ozawa S, et al
    Health and economic impact of the pneumococcal conjugate vaccine in hindering antimicrobial resistance in China.
    Proc Natl Acad Sci U S A. 2021;118:e2004933118.
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