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Articles published in
J Clin Microbiol
    April 2025
  1. DIERCKX L, Rodriguez-Ruiz JP, Ekinci E, van Heirstraeten L, et al
    Pneumococcal genotype 23B1 as a driver of increased 23B serotype carriage, penicillin non-susceptibility, and invasive disease in Belgium: a retrospective analysis.
    J Clin Microbiol. 2025;63:e0169624.
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  2. TURBAWATY DK, Maulida SN, Anadhea DR, Ritonga MA, et al
    Standard E TB-Feron ELISA and Standard F TB-Feron FIA positivity rates and agreement with QuantiFERON-TB Gold Plus among TB high-risk population in Bandung, Indonesia.
    J Clin Microbiol. 2025;63:e0148624.
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  3. CZECH MM, Cuellar-Rodriguez J, Kwon-Chung KJ, Stock F, et al
    Clinical significance and antifungal susceptibility profile of 103 clinical isolates of Scedosporium species complex and Lomentospora prolificans obtained from NIH patients.
    J Clin Microbiol. 2025;63:e0155024.
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  4. BIZOT E, Bonacorsi S, Labe P, Pinhas Y, et al
    Use of gastrointestinal syndromic multiplex molecular assays and detection of Escherichia coli pathotypes in pediatric wards.
    J Clin Microbiol. 2025;63:e0107324.
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    March 2025
  5. GLASSMAN H, Ahmed-Bentley J, Buckman R, Carbungco M, et al
    Impact of packed red blood cells versus fresh whole human blood on the growth of nutritionally variant streptococci and Streptococcus anginosus group during verification of the BACT/ALERT VIRTUO blood culture system.
    J Clin Microbiol. 2025 Mar 31:e0198724. doi: 10.1128/jcm.01987.
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  6. EIGNER U, Koffer J, Betz U, Koglin J, et al
    Evaluation of the cobas MTB and MTB-RIF/INH assay in clinical samples for the detection of Mycobacterium tuberculosis in respiratory specimens.
    J Clin Microbiol. 2025 Mar 25:e0195924. doi: 10.1128/jcm.01959.
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  7. LAMBERINK H, Huygens S, Aerts R, Lagrou K, et al
    Correction for Lamberink et al., "Multicenter validation of a galactomannan chemiluminescence immunoassay for the diagnosis of pulmonary aspergillosis on serum of patients with hematological disease".
    J Clin Microbiol. 2025 Mar 25:e0039425. doi: 10.1128/jcm.00394.
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  8. YU S, Liu N, Xie Z, Zeng Y, et al
    Nanopore sequencing for precise detection of Mycobacterium tuberculosis and drug resistance: a retrospective multicenter study in China.
    J Clin Microbiol. 2025 Mar 19:e0181324. doi: 10.1128/jcm.01813.
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  9. MCMAHON J, Tomita N, Tatishev ES, Workman AA, et al
    A novel framework for the automated characterization of Gram-stained blood culture slides using a large-scale vision transformer.
    J Clin Microbiol. 2025;63:e0151424.
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  10. WEIGL S, Dabernig-Heinz J, Granitz F, Lipp M, et al
    Improving Nanopore sequencing-based core genome MLST for global infection control: a strategy for GC-rich pathogens like Burkholderia pseudomallei.
    J Clin Microbiol. 2025;63:e0156924.
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  11. JARAMILLO CARTAGENA A, Asowata OE, Ng D, Babady NE, et al
    An overview of the laboratory diagnosis of Pneumocystis jirovecii pneumonia.
    J Clin Microbiol. 2025;63:e0036124.
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  12. GONZALEZ-LARA MF, Roman-Montes CM, Diaz-Lomeli P, Hernandez-Ceballos W, et al
    Comparison of the Filamentous Fungi Library v4.0 MALDI Biotyper Platform vs MSI-2 performance for identifying filamentous fungi from liquid cultures.
    J Clin Microbiol. 2025;63:e0137124.
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  13. KOMINE T, Fukano H, Yoshida M, Miyamoto Y, et al
    A rapid and simple MALDI-TOF MS lipid profiling method for differentiating Mycobacterium ulcerans from Mycobacterium marinum.
    J Clin Microbiol. 2025;63:e0140024.
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  14. CUELLA-MARTIN I, Runyambo D, De Bock S, Diels M, et al
    Direct thin-layer agar for bedaquiline-susceptibility testing of Mycobacterium tuberculosis at BSL2 level yields high accuracy in 15 days from sputum processing.
    J Clin Microbiol. 2025 Mar 3:e0180624. doi: 10.1128/jcm.01806.
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    February 2025
  15. JORTH P, Manuel C, McLemore T, Humphries RM, et al
    Evaluation of antimicrobial susceptibility testing methods for Burkholderia cepacia complex isolates from people with and without cystic fibrosis.
    J Clin Microbiol. 2025;63:e0148024.
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  16. WEYAND LK, Felts BL, Cassirer EF, Jenks JA, et al
    Fatal interactions: pneumonia in bighorn lambs following experimental exposure to carriers of Mycoplasma ovipneumoniae.
    J Clin Microbiol. 2025;63:e0132824.
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  17. RANSOM EM, Wallace MA, Wiederhold NP, Canete-Gibas C, et al
    Evaluation of two MALDI-TOF MS systems and extraction methods for identification of filamentous fungi recovered from clinical specimens.
    J Clin Microbiol. 2025;63:e0154824.
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  18. KHAN A, Manuel C, Maynard R, Humphries RM, et al
    Evaluation of piperacillin-tazobactam disks using contemporary Enterobacterales isolates suggests the need for disk potency optimization.
    J Clin Microbiol. 2025;63:e0159924.
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  19. PEIRANO G, Pitout JDD
    Rapidly spreading Enterobacterales with OXA-48-like carbapenemases.
    J Clin Microbiol. 2025;63:e0151524.
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  20. ROCCHI S, Scherer E, White PL, Guitton A, et al
    Interlaboratory assays from the fungal PCR Initiative and the Modimucor Study Group to improve qPCR detection of Mucorales DNA in serum: one more step toward standardization.
    J Clin Microbiol. 2025;63:e0152524.
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  21. SAYEED MA, Nabil IK, Bhattacharjee P, Hossain MS, et al
    Assembly and performance of a cholera RDT prototype that detects both Vibrio cholerae and associated bacteriophage as a proxy for pathogen detection.
    J Clin Microbiol. 2025;63:e0144324.
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  22. SANCHEZ GJ, Cuypers L, Laenen L, Majek P, et al
    Prediction of antimicrobial susceptibility of pneumococci based on whole-genome sequencing data: a direct comparison of two genomic tools to conventional antimicrobial susceptibility testing.
    J Clin Microbiol. 2025;63:e0107924.
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  23. CINTRON M, Clark B, Miranda E, Babady NE, et al
    Utility of digital images captured after 4 h of incubation on a microbiology laboratory automation system in guiding the work-up of subcultures from positive blood cultures.
    J Clin Microbiol. 2025;63:e0132024.
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  24. SCHWAB TC, Joseph L, Moono A, Goller PC, et al
    Field evaluation of nanopore targeted next-generation sequencing to predict drug-resistant tuberculosis from native sputum in South Africa and Zambia.
    J Clin Microbiol. 2025 Feb 12:e0139024. doi: 10.1128/jcm.01390.
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    January 2025
  25. RICKMAN HM, Phiri MD, Mbale H, Horton KC, et al
    Low concordance between QIAreach QuantiFERON-TB, a novel interferon-gamma release assay, and QuantiFERON-TB Gold Plus, in a population-based survey in Blantyre, Malawi.
    J Clin Microbiol. 2025;63:e0132324.
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  26. XU N, Wen S, Yao Y, Guan Y, et al
    Two-transcript signature for differentiation and clinical outcomes in severe fever with thrombocytopenia syndrome (SFTS) patients: a double-blind, multicenter, validation study.
    J Clin Microbiol. 2025;63:e0128224.
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  27. TANSARLI GS, Falagas ME, Fang FC
    Clinical significance of toxin EIA positivity in patients with suspected Clostridioides difficile infection: systematic review and meta-analysis.
    J Clin Microbiol. 2025;63:e0097724.
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  28. PERIYASAMY D, Huang Y, Hill JE
    Targeted syndromic next-generation sequencing panel for simultaneous detection of pathogens associated with bovine reproductive failure.
    J Clin Microbiol. 2025;63:e0143324.
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  29. LIU H, Zhang L, Jiang M, Zhang Y, et al
    Rapid detection of carbapenemase production in Aeromonas using phenotypic tests based on colorimetric microtube assay.
    J Clin Microbiol. 2025;63:e0110424.
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  30. CHOU C-H, Chao Q-T, Lu Y-S, Lee T-F, et al
    Comparison of the BluePoint MoldID oligonucleotide array and Bruker Biotyper MALDI-TOF MS for the identification of filamentous fungi.
    J Clin Microbiol. 2025;63:e0104824.
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  31. CHEON DH, Jang H, Choi YK, Oh WS, et al
    Clinical evaluation of advanced MALDI-TOF MS for carbapenemase subtyping in Gram-negative isolates.
    J Clin Microbiol. 2025;63:e0147524.
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  32. CANDELA A, Rodriguez-Temporal D, Lumbreras P, Guijarro-Sanchez P, et al
    Multicenter evaluation of Fourier transform infrared (FTIR) spectroscopy as a first-line typing tool for carbapenemase-producing Klebsiella pneumoniae in clinical settings.
    J Clin Microbiol. 2025;63:e0112224.
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  33. MCTAGGART LR, Cronin K, Ruscica S, Patel SN, et al
    Emergence of terbinafine-resistant Trichophyton indotineae in Ontario, Canada, 2014-2023.
    J Clin Microbiol. 2025;63:e0153524.
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  34. WINKLER ML, Deshpande L, Kimbrough JH, Karr M, et al
    Anidulafungin is a useful surrogate marker for predicting in vitro susceptibility to rezafungin among five Candida species using CLSI methods and interpretive criteria.
    J Clin Microbiol. 2025 Jan 22:e0112924. doi: 10.1128/jcm.01129.
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  35. LAMBERINK H, Huygens S, Aerts R, Lagrou K, et al
    Multicenter validation of a galactomannan chemiluminescence immunoassay for the diagnosis of pulmonary aspergillosis on serum of patients with hematological disease.
    J Clin Microbiol. 2025 Jan 21:e0105324. doi: 10.1128/jcm.01053.
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  36. GALI V, Al-Ghanamah R, Finnigan K, Kalchiem-Dekel O, et al
    Evaluating the clinical utility of Aspergillus, Mucorales, and Nocardia bronchoalveolar PCRs for the diagnosis of invasive pulmonary infections in patients with hematological malignancies.
    J Clin Microbiol. 2025 Jan 16:e0135524. doi: 10.1128/jcm.01355.
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    December 2024
  37. OLSON AM, Wood RC, Weigel KM, Yan AJ, et al
    High-sensitivity detection of Mycobacterium tuberculosis DNA in tongue swab samples.
    J Clin Microbiol. 2024 Dec 31:e0114024. doi: 10.1128/jcm.01140.
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  38. WINKLER ML, Rhomberg PR, Fedler KA, Huband MD, et al
    Use of voriconazole to predict susceptibility and resistance to isavuconazole for Aspergillus fumigatus using CLSI methods and interpretive criteria.
    J Clin Microbiol. 2024 Dec 20:e0120724. doi: 10.1128/jcm.01207.
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  39. PENVEN M, Louazon M, Freret C, Sauron A, et al
    Comparative performances of the Qvella FAST system and conventional methods for rapid identification and antibiotic susceptibility testing on monomicrobial positive blood cultures.
    J Clin Microbiol. 2024 Dec 20:e0133224. doi: 10.1128/jcm.01332.
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  40. AUPAIX A, Verroken A, Rodriguez-Villalobos H
    Evaluation of a new protocol for rapid identification of Streptococcus pneumoniae in blood cultures using the modified bile solubility test: Gram staining is still standing.
    J Clin Microbiol. 2024 Dec 18:e0122224. doi: 10.1128/jcm.01222.
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  41. REN X, Suo B, Li C, Ping G, et al
    Comparative analysis of the detection of antibiotic genotypic resistance with gastric mucosa, gastric fluid, and fecal samples in patients with Helicobacter pylori infection.
    J Clin Microbiol. 2024 Dec 16:e0103424. doi: 10.1128/jcm.01034.
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  42. GUIRAUD J, Piau C, Enault C, Nkpa Charron E, et al
    Comparison of the molecular FluoroType Mycobacteria VER 1.0 and the Maldi BioTyper Mycobacteria assays for the identification of non-tuberculous mycobacteria.
    J Clin Microbiol. 2024 Dec 11:e0120624. doi: 10.1128/jcm.01206.
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  43. KHODADADI RB, El Zein S, Rivera O'Connor CG, Stevens RW, et al
    Retrospective analysis of antimicrobial susceptibility profiles of non-diphtheriae Corynebacterium species from a tertiary hospital and reference laboratory, 2012-2023.
    J Clin Microbiol. 2024;62:e0119924.
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  44. DE HOOG S, Walsh TJ, Ahmed SA, Alastruey-Izquierdo A, et al
    Nomenclature for human and animal fungal pathogens and diseases: a proposal for standardized terminology.
    J Clin Microbiol. 2024;62:e0093724.
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  45. TAWDE Y, Das S, Singh S, Basak S, et al
    Evaluation of Fungitell (1,3)-beta-D-glucan assay in tear samples for rapid diagnosis of fungal keratitis.
    J Clin Microbiol. 2024;62:e0120024.
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  46. CARELLA A, Carroll KC, Munson E
    Update on novel validly published and included bacterial taxa derived from human clinical specimens and taxonomic revisions published in 2023.
    J Clin Microbiol. 2024;62:e0100424.
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  47. LUU LDW, Rafique R, Payne M, Octavia S, et al
    Deciphering Bordetella pertussis epidemiology through culture-independent multiplex amplicon and metagenomic sequencing.
    J Clin Microbiol. 2024;62:e0117824.
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  48. LANDIVAR SM, Melli LJ, Maiztegui C, Schesi C, et al
    A novel multiplex and glycoprotein-based immunochromatographic serologic IgM test for the rapid diagnosis of Escherichia coli O157 and O145 causing bloody diarrhea and hemolytic uremic syndrome.
    J Clin Microbiol. 2024;62:e0100324.
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  49. SNYDER JW, Chaudhry N, Hoffmann W
    Performance of the LifeScale automated rapid phenotypic antimicrobial susceptibility testing on Gram-negative rods directly from positive blood cultures.
    J Clin Microbiol. 2024;62:e0092224.
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    November 2024
  50. ALVAREZ OTERO J, Mandrekar J, Wolf MJ, Starkey JC, et al
    Pleural space infection microbiology as assessed using a clinical sequencing-based assay: Fusobacterium nucleatum group, Streptococcus intermedius, and other oral normal microbiota are the most common bacteria identified in community-acquired pleural
    J Clin Microbiol. 2024 Nov 25:e0069424. doi: 10.1128/jcm.00694.
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  51. SABOUR S, Harrington KRV, Martinson E, Bhatnagar AS, et al
    Characterization of carbapenem-resistant Enterobacterales and Pseudomonas aeruginosa carrying multiple carbapenemase genes-Antimicrobial Resistance Laboratory Network, 2018-2022.
    J Clin Microbiol. 2024 Nov 20:e0122024. doi: 10.1128/jcm.01220.
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  52. CHAN H-H, Wang Y-C, Jou R
    A simplified pyrazinamidase test for Mycobacterium tuberculosis pyrazinamide antimicrobial susceptibility testing.
    J Clin Microbiol. 2024 Nov 18:e0122724. doi: 10.1128/jcm.01227.
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  53. OSTERMANN G, Korber-Irrgang B, Kruger A, Singh P, et al
    Performance evaluation of the Specific Reveal system for rapid antibiotic susceptibility testing from positive blood cultures containing Gram-negative pathogens.
    J Clin Microbiol. 2024 Nov 15:e0069224. doi: 10.1128/jcm.00692.
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  54. CASTELLANOS LR, Chaffee R, Kumar H, Mezgebo BK, et al
    A novel machine-learning aided platform for rapid detection of urine ESBLs and carbapenemases: URECA-LAMP.
    J Clin Microbiol. 2024;62:e0086924.
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  55. KERING K, Njaanake K, Wairimu C, Mureithi M, et al
    Shedding of nontyphoidal Salmonella by asymptomatic convalescing children under 5 years as a risk factor for invasive disease in Mukuru informal settlement in Nairobi, Kenya.
    J Clin Microbiol. 2024;62:e0075024.
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  56. YOUNG EL, Roach DJ, Martinsen MA, McGrath GEG, et al
    Clinical pilot of bacterial transcriptional profiling as a combined genotypic and phenotypic antimicrobial susceptibility test.
    J Clin Microbiol. 2024;62:e0099724.
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  57. LEE RA
    Clinical performance evaluation of the BioFire Joint Infection Panel.
    J Clin Microbiol. 2024;62:e0102224.
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  58. PUTHAWALA CM, Feinn RS, Rivera-Vinas J, Lee H, et al
    Persistent bloodstream infection in children: examining the role for repeat blood cultures.
    J Clin Microbiol. 2024;62:e0099824.
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  59. BIGGEL M, Cernela N, Horlbog JA, Stephan R, et al
    Oxford Nanopore's 2024 sequencing technology for Listeria monocytogenes outbreak detection and source attribution: progress and clone-specific challenges.
    J Clin Microbiol. 2024;62:e0108324.
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  60. SMITH AC, Shrivastava A, Cartee JC, Belanger M, et al
    Whole-genome sequencing resolves biochemical misidentification of Neisseria species from urogenital specimens.
    J Clin Microbiol. 2024;62:e0070424.
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  61. LEMON JK, Jankowsi-Romano C, Duong S, Juretschko S, et al
    Evaluation of gradient strip diffusion for susceptibility testing of aztreonam-avibactam in metallo-beta-lactamase-producing Enterobacterales.
    J Clin Microbiol. 2024;62:e0064924.
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  62. BASHEER M, Sasic K, Carlsson A, Vestberg N, et al
    A novel LAMP-based assay for the identification of Streptococcus pneumoniae and Streptococcus pseudopneumoniae in clinical isolates.
    J Clin Microbiol. 2024 Nov 11:e0091224. doi: 10.1128/jcm.00912.
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  63. IMAI K, Sato A, Tanaka M, Ohama Y, et al
    Prospective evaluation of non-invasive saliva specimens for the diagnosis of syphilis and molecular surveillance of Treponema pallidum.
    J Clin Microbiol. 2024 Nov 6:e0080924. doi: 10.1128/jcm.00809.
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  64. NG S, Tan CY, Yah JY, Osman NAB, et al
    Evaluation of the QIAstat-Dx BCID GN and GPF kits for direct identification and antimicrobial resistance prediction from blood culture bottles.
    J Clin Microbiol. 2024 Nov 6:e0116924. doi: 10.1128/jcm.01169.
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  65. SCHUB T, Klugherz I, Wagener J, Prattes J, et al
    Serum antigen tests for the diagnosis of invasive aspergillosis: a retrospective comparison of five Aspergillus antigen assays and one beta-D-glucan assay.
    J Clin Microbiol. 2024 Nov 4:e0095024. doi: 10.1128/jcm.00950.
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    October 2024
  66. GIBERT C, Tirard-Collet P, Miossec C, Dupont D, et al
    Reverse-transcriptase real-time PCR in the diagnostic strategy for invasive infections caused by Aspergillus fumigatus.
    J Clin Microbiol. 2024 Oct 24:e0079124. doi: 10.1128/jcm.00791.
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  67. GAEDDERT M, Glaser K, Chendi BH, Sultanli A, et al
    Host blood protein biomarkers to screen for tuberculosis disease: a systematic review and meta-analysis.
    J Clin Microbiol. 2024 Oct 24:e0078624. doi: 10.1128/jcm.00786.
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  68. MCHUGH JW, Bayless DR, Ranganath N, Stevens RW, et al
    Candida guilliermondii fungemia: a 12-year retrospective review of antimicrobial susceptibility patterns at a reference laboratory and tertiary care center.
    J Clin Microbiol. 2024 Oct 23:e0105724. doi: 10.1128/jcm.01057.
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  69. HAREL F, Robert-Gangneux F, Gangneux J-P, Guegan H, et al
    Monocentric evaluation of the Novaplex dermatophyte multiplex qPCR assay in the diagnosis of dermatophytoses.
    J Clin Microbiol. 2024;62:e0089424.
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  70. BERINSON B, Davies E, Torpner J, Flinkfeldt L, et al
    A multicenter evaluation of a novel microfluidic rapid AST assay for Gram-negative bloodstream infections.
    J Clin Microbiol. 2024;62:e0045824.
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  71. RIVAS L, Horn B, Armstrong B, Wright J, et al
    A case-control study and molecular epidemiology of yersiniosis in Aotearoa New Zealand.
    J Clin Microbiol. 2024;62:e0075424.
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  72. M'IKANATHA NM, Goldblum ZS, Cesari N, Nawrocki EM, et al
    Outbreak-associated Salmonella Baildon found in wastewater demonstrates how sewage monitoring can supplement traditional disease surveillance.
    J Clin Microbiol. 2024;62:e0082524.
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  73. HASAN R, Azizullah Z, Shams H, Dittrich S, et al
    Evaluation of a point-of-care multiplex immunochromatographic assay for the diagnosis of typhoid: results from a retrospective diagnostic accuracy study.
    J Clin Microbiol. 2024;62:e0042824.
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  74. LEBER AL, Oyeniran SJ, Wang H
    Reduced sensitivity of a multiplex commercial respiratory panel for detection of Mycoplasma pneumoniae is due to specimen type.
    J Clin Microbiol. 2024;62:e0113924.
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  75. CAMPBELL S, Taylor B, Menouhos D, Hennessy J, et al
    Performance of MALDI-TOF MS, real-time PCR, antigen detection, and automated biochemical testing for the identification of Burkholderia pseudomallei.
    J Clin Microbiol. 2024;62:e0096124.
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  76. MCMILLAN IA, Norris MH, Golon SJ, Franckowiak GA, et al
    Serosurveillance of Coxiella burnetii in feral swine populations of Hawai'i and Texas identifies overlap with human Q fever incidence.
    J Clin Microbiol. 2024;62:e0078024.
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  77. SANTOS STREAUSLIN J, Nielsen DW, Schwartz KJ, Derscheid RJ, et al
    Characterization of neurologic disease-associated Streptococcus suis strains within the United States swine herd and use of diagnostic tools.
    J Clin Microbiol. 2024 Oct 8:e0037424. doi: 10.1128/jcm.00374.
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    September 2024
  78. LUUKINEN B, Aittoniemi J, Miikkulainen-Lahti T, Mentula S, et al
    Evaluation of the STANDARD M10 MDR-TB and MTB/NTM assays for the detection of Mycobacterium tuberculosis, rifampicin and isoniazid resistance, and nontuberculous mycobacteria in a low-incidence setting.
    J Clin Microbiol. 2024 Sep 19:e0040224. doi: 10.1128/jcm.00402.
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  79. MANUEL C, Maynard R, Simpkins S, Haro M, et al
    Evaluation of an expanded antibiotic resistance gene panel on prediction of antimicrobial susceptibility results for Gram-negative bacteria in blood cultures.
    J Clin Microbiol. 2024 Sep 19:e0102024. doi: 10.1128/jcm.01020.
    >> Share

  80. MITCHELL BI, Kling K, Bolon MK, Rathod SN, et al
    Identifying Candida auris transmission in a hospital outbreak investigation using whole-genome sequencing and SNP phylogenetic analysis.
    J Clin Microbiol. 2024 Sep 16:e0068024. doi: 10.1128/jcm.00680.
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  81. EICKHOFF MJ, Dumm RE
    The Brief Case: Tricky Trichosporon asahii in the urinary tract.
    J Clin Microbiol. 2024;62:e0055724.
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  82. SCHWEBKE JR, Nyirjesy P, Dsouza M, Getman D, et al
    Vaginitis and risk of sexually transmitted infections: results of a multi-center U.S. clinical study using STI nucleic acid amplification testing.
    J Clin Microbiol. 2024;62:e0081624.
    >> Share

  83. KEHRMANN J, Stumpf AL, Dragaqina A, Buer J, et al
    Improved detection of mycobacteria in CF and tissue samples grown in mycobacteria growth indicator tube incubated at 30 degrees C compared to conventional growth conditions of liquid and solid media.
    J Clin Microbiol. 2024;62:e0068324.
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  84. CABIBBE AM, Moghaddasi K, Batignani V, Morgan GSK, et al
    Nanopore-based targeted sequencing test for direct tuberculosis identification, genotyping, and detection of drug resistance mutations: a side-by-side comparison of targeted next-generation sequencing technologies.
    J Clin Microbiol. 2024 Sep 6:e0081524. doi: 10.1128/jcm.00815.
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    August 2024
  85. RUMKE LW, Davies MA, Vestjens SMT, van der Putten BCL, et al
    Nationwide upsurge in invasive disease in the context of longitudinal surveillance of carriage and invasive Streptococcus pyogenes 2009-2023, the Netherlands: a molecular epidemiological study.
    J Clin Microbiol. 2024 Aug 28:e0076624. doi: 10.1128/jcm.00766.
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  86. CHRISTIANS FC, Akhund-Zade J, Jarman K, Venkatasubrahmanyam S, et al
    Analytical and clinical validation of direct detection of antimicrobial resistance markers by plasma microbial cell-free DNA sequencing.
    J Clin Microbiol. 2024 Aug 28:e0042524. doi: 10.1128/jcm.00425.
    >> Share

  87. SMITH A, Wong-O'Brien B, Lieberman JA, Cookson BT, et al
    The Brief Case: A case of tinea corporis caused by drug-resistant Trichophyton indotineae identified by broad-range fungal DNA sequencing.
    J Clin Microbiol. 2024;62:e0023424.
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  88. CRAWFORD LC, Kidd SE
    Photo Quiz: Subungual organism in a renal transplant patient.
    J Clin Microbiol. 2024;62:e0171023.
    >> Share

  89. BUENESTADO-SERRANO S, Martinez-Lirola M, Dippenaar A, Sanz-Perez A, et al
    Bridging the gap between molecular and genomic epidemiology in tuberculosis: inferring MIRU-VNTR patterns from genomic data.
    J Clin Microbiol. 2024 Aug 13:e0074124. doi: 10.1128/jcm.00741.
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    July 2024
  90. OMAR SV, Louw G, Ismail F, Liu X, et al
    Performance evaluation of the Xpert MTB/XDR test for the detection of drug resistance to Mycobacterium tuberculosis among people diagnosed with tuberculosis in South Africa.
    J Clin Microbiol. 2024 Jul 26:e0022924. doi: 10.1128/jcm.00229.
    >> Share

  91. AKINAGA A, Takahashi M, Yamazaki T, Chikamatsu K, et al
    Development and preliminary evaluation toward a new tuberculosis treatment monitoring tool: the PATHFAST TB LAM Ag assay.
    J Clin Microbiol. 2024 Jul 19:e0062924. doi: 10.1128/jcm.00629.
    >> Share

  92. RATTIN J, Marigney K, Miranda C, Arrossi AV, et al
    The Brief Case: False-negative Pneumocystis PCR.
    J Clin Microbiol. 2024;62:e0009424.
    >> Share

  93. MAUFFREY F, Bertelli C, Greub G, Senn L, et al
    Genomic evolution of ST228 SCCmec-I MRSA 10 years after a major nosocomial outbreak.
    J Clin Microbiol. 2024;62:e0020324.
    >> Share

  94. LEE H-W, Yu H-J, Kim H, Yun SA, et al
    Comparative evaluation of the STANDARD M10 and Xpert C. difficile assays for detection of toxigenic Clostridioides difficile in stool specimens.
    J Clin Microbiol. 2024;62:e0052424.
    >> Share

  95. SULLIVAN KV, Long T, Hillesland E, Rhoads DD, et al
    Low utilization of epidemiological cutoff values to interpret in vitro antifungal susceptibility testing among clinical laboratory participants in two College of American Pathologists (CAP) proficiency testing programs.
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  96. MACCARI L, Ceriana P, Granchetti HN, Pezzaniti AV, et al
    Improved Blue Carba test and Carba NP test for detection and classification of major Class A and B carbapenemases, including dual producers, among Gram-negative bacilli.
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  97. BIVAND JM, Dyrhovden R, Sivertsen A, Tellevik MG, et al
    Broad-range amplification and sequencing of the rpoB gene: a novel assay for bacterial identification in clinical microbiology.
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  98. WANG H, Yu D, Chen X, Zhou Y, et al
    Performance of rapid on-site evaluation of touch imprints of bronchoscopic biopsies or lung tissue biopsies for the diagnosis of invasive pulmonary filamentous fungi infections in non-neutropenic patients.
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  99. HOCKMAN BE, Qi M, Rotblatt H, Borenstein L, et al
    Overcoming analytical and preanalytical challenges associated with extragenital home collected STI specimens.
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  100. ZHANG J, Xu J, Shen S, Ding L, et al
    Comparison of three colloidal gold immunoassays and GeneXpert Carba-R for the detection of Klebsiella pneumoniae bla(KPC-2) variants.
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  101. CHENG A, Das A, Styles CE, Naing Z, et al
    Improved efficiency using sequential automated immunoassays for syphilis screening in blood donors.
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  102. PIRES J, Brandal LT, Naseer U
    Development and implementation of a core genome multilocus sequence typing scheme for Yersinia enterocolitica: a tool for surveillance and outbreak detection.
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  103. BERTRAM R, Itzek A, Marr L, Manzke J, et al
    Divergent effects of emm types 1 and 12 on invasive group A streptococcal infections-results of a retrospective cohort study, Germany 2023.
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  104. ALLAN-BLITZ L-T, Villarreal D, Klausner JD
    IgM tests for detecting Treponema pallidum infection in newborns: time to establish a reference comparator.
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    June 2024
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    A simple and sensitive test for Candida auris colonization, surveillance, and infection control suitable for near patient use.
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  106. PUTNAM NE, Tayabali K, Yu JR, Decolin I, et al
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  108. GOSHIA T, Aralar A, Wiederhold N, Jenks JD, et al
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  111. SCHEUTZ F, Nielsen CH, von Mentzer A
    Construction of the ETECFinder database for the characterization of enterotoxigenic Escherichia coli (ETEC) and revision of the VirulenceFinder web tool at the CGE website.
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  112. PEREYRE S, Henin N, Dolzy A, Guiraud J, et al
    Evaluation of commercial, customized microdilution plates for Ureaplasma parvum, Ureaplasma urealyticum, and Mycoplasma hominis antimicrobial susceptibility testing and determination of antimicrobial resistance prevalence in France.
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    May 2024
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    Azole resistance screening in Aspergillus fumigatus sensu stricto using the azole-containing agar method (EUCAST E.Def 10.2): conidial suspension filtration and inoculum adjustment before inoculum preparation may not be needed.
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  114. MISAS E, Seagle E, Jenkins EN, Rajeev M, et al
    Erratum for Misas et al., "Genomic description of acquired fluconazole- and echinocandin-resistance in patients with serial Candida glabrata isolates".
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  115. ATTAWAY CC, Tobin E, Rhoads DD
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  116. FISHER J, Garrett EM
    The Brief Case: Cardiobacterium hominis endocarditis in a pediatric patient with congenital heart disease.
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  117. HAMILTON-SETH R, Streva V, Gammel N, Campodonico VL, et al
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  118. OSBORN LJ, Fissel J, Gomez S, Mestas J, et al
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  119. LANDRY ML, Hassan S, Rottmann BG, Pesak SJ, et al
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  121. MOSTAFA HH
    An evolution of Nanopore next-generation sequencing technology: implications for medical microbiology and public health.
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  122. BOGAERTS B, Van den Bossche A, Verhaegen B, Delbrassinne L, et al
    Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
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    Comparison of BD Phoenix and disk diffusion to broth microdilution for determining cefepime susceptibility among carbapenem-resistant Enterobacterales.
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    Validation of a qualitative real-time PCR assay for the detection of Candida auris in hospital inpatient screening.
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    April 2024
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    Dynamics and prognostic value of plasma cell-free DNA PCR in patients with invasive aspergillosis and mucormycosis.
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  127. WEEBER P, Singh N, Lapierre P, Mingle L, et al
    A novel hybridization capture method for direct whole genome sequencing of clinical specimens to inform Legionnaires' disease investigations.
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  128. ITO A, Ishida T, Tachibana H, Nakanishi Y, et al
    Identification rate of Legionella species in non-purulent sputum culture is comparable to that in purulent sputum culture in Legionella pneumonia.
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  129. GIFFEN SR, Stoeppler E, Elliott A, Miller MB, et al
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    The integration of Coxiella burnetii PCR testing in serum into the diagnostic algorithm of suspected acute Q fever in an endemic setting.
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  131. WALSH TJ, Mencacci A, Paggi R, Douka E, et al
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    Automated detection of methicillin-resistant Staphylococcus aureus with the MRSA CHROM imaging application on BD Kiestra Total Lab Automation System.
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    March 2024
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    Evaluation of the Vitek 2 system for antifungal susceptibility testing of Candida auris using a representative international panel of clinical isolates: overestimation of amphotericin B resistance and underestimation of fluconazole resistance.
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  135. WOOD RC, Luabeya AK, Dragovich RB, Olson AM, et al
    Diagnostic accuracy of tongue swab testing on two automated tuberculosis diagnostic platforms, Cepheid Xpert MTB/RIF Ultra and Molbio Truenat MTB Ultima.
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  136. GIFFEN SR, Alby K
    The Brief Case: A case of bloodstream infection with Corynebacterium kroppenstedtii in an infant.
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    This is giving me a complex: a practical attempt to streamline nontuberculous mycobacteria nomenclature for clinical purposes.
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  139. PEIRANO G, Castellanos LR, Matsumura Y, Chaffee R, et al
    Clinical validation of loop-mediated isothermal amplification for the detection of Escherichia coli sequence type complex 131.
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    Evaluation of the FluoroType Mycobacteria assay for identification of mycobacteria.
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  141. RANGANATH N, Mendoza MA, Stevens R, Kind D, et al
    Rhodococcus infection: a 10-year retrospective analysis of clinical experience and antimicrobial susceptibility profile.
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  142. VINAYARAJ EV, Thakur CK, Negi P, Sreenath K, et al
    Epidemiological, clinical, and laboratory characteristics of human granulocytic anaplasmosis in North India.
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  143. IYER V, Castro D, Malla B, Panda B, et al
    Culture-independent identification of bloodstream infections from whole blood: prospective evaluation in specimens of known infection status.
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  144. DESRUISSEAUX C, Broderick C, Lavergne V, Sy K, et al
    Retrospective validation of MetaSystems' deep-learning-based digital microscopy platform with assistance compared to manual fluorescence microscopy for detection of mycobacteria.
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  145. TRAM TTB, Trieu LPT, Nhat LTH, Thu DDA, et al
    Targeted sequencing from cerebrospinal fluid for rapid identification of drug-resistant tuberculous meningitis.
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