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Articles published in
J Clin Microbiol
    May 2023
  1. CHEN X, Li R, Ge S, Li Y, et al
    Rapid Detection of Extensive Drug Resistance by Xpert MTB/XDR Optimizes Therapeutic Decision-Making in Rifampin-Resistant Tuberculosis Patients.
    J Clin Microbiol. 2023 May 30:e0183222. doi: 10.1128/jcm.01832.
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  2. RUEGAMER T, Harrer DC, Simon M, Sandner AS, et al
    Photo Quiz: Gram-Positive Meningitis following Allogeneic Stem Cell Transplantation.
    J Clin Microbiol. 2023;61:e0133922.
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  3. RUEGAMER T, Harrer DC, Simon M, Sandner AS, et al
    Answer to May 2023 Photo Quiz.
    J Clin Microbiol. 2023;61:e0134022.
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  4. MAKI JJ, Howard M, Connelly S, Pettengill MA, et al
    Species Delineation and Comparative Genomics within the Campylobacter ureolyticus Complex.
    J Clin Microbiol. 2023;61:e0004623.
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  5. WORLEY JN, Crothers JW, Wolfgang WJ, Venkata SLG, et al
    Prospective Genomic Surveillance Reveals Cryptic MRSA Outbreaks with Local to International Origins among NICU Patients.
    J Clin Microbiol. 2023;61:e0001423.
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  6. MCHARDY IH, Barker B, Thompson GR 3rd
    Review of Clinical and Laboratory Diagnostics for Coccidioidomycosis.
    J Clin Microbiol. 2023;61:e0158122.
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  7. ZHANG S, Chen X, Lin Z, Tan Y, et al
    Quantification of Isoniazid-Heteroresistant Mycobacterium tuberculosis Using Droplet Digital PCR.
    J Clin Microbiol. 2023 May 17:e0188422. doi: 10.1128/jcm.01884.
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    April 2023
  8. BUIL JB, Huygens S, Dunbar A, Schauwvlieghe A, et al
    Retrospective Multicenter Evaluation of the VirClia Galactomannan Antigen Assay for the Diagnosis of Pulmonary Aspergillosis with Bronchoalveolar Lavage Fluid Samples from Patients with Hematological Disease.
    J Clin Microbiol. 2023 Apr 25:e0004423. doi: 10.1128/jcm.00044.
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  9. BRONCANO-LAVADO A, Barrado L, Lopez-Roa P, Cacho J, et al
    Clinical Evaluation of Nontuberculous Mycobacteria (NTM) Elite Agar, a New Medium for the Isolation of NTM: a Multicenter Study.
    J Clin Microbiol. 2023;61:e0003623.
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  10. GANAIE FA, Saad JS, Lo SW, McGee L, et al
    Discovery and Characterization of Pneumococcal Serogroup 36 Capsule Subtypes, Serotypes 36A and 36B.
    J Clin Microbiol. 2023;61:e0002423.
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  11. ARMSTRONG DT, Eisemann E, Parrish N
    A Brief Update on Mycobacterial Taxonomy, 2020 to 2022.
    J Clin Microbiol. 2023;61:e0033122.
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  12. ODEBERG G, Blackberg A, Sunnerhagen T
    Infection or Contamination with Rothia, Kocuria, Arthrobacter and Pseudoglutamicibacter-a Retrospective Observational Study of Non-Micrococcus Micrococcaceae in the Clinic.
    J Clin Microbiol. 2023;61:e0148422.
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  13. FUKUSHIMA K, Matsumoto Y, Matsuki T, Saito H, et al
    MGIT-seq for the Identification of Nontuberculous Mycobacteria and Drug Resistance: a Prospective Study.
    J Clin Microbiol. 2023;61:e0162622.
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  14. LOPEZ JM, Zimic M, Vallejos K, Sevilla D, et al
    Quantitative (1)H Nuclear Magnetic Resonance Assay for the Rapid Detection of Pyrazinamide Resistance in Mycobacterium tuberculosis from Sputum Samples.
    J Clin Microbiol. 2023 Apr 18:e0152222. doi: 10.1128/jcm.01522.
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  15. TRAM TTB, Ha VTN, Trieu LPT, Ashton PM, et al
    FLASH-TB: an Application of Next-Generation CRISPR to Detect Drug Resistant Tuberculosis from Direct Sputum.
    J Clin Microbiol. 2023 Apr 3:e0163422. doi: 10.1128/jcm.01634.
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    March 2023
  16. HESS KA, Kooda K, Shulha JA, Mara K, et al
    Retrospective Evaluation of the Association of Oxacillin MIC on Acute Treatment Outcomes with Cefazolin and Antistaphylococcal Penicillins in Methicillin-Susceptible Staphylococcus aureus Bacteremia.
    J Clin Microbiol. 2023 Mar 29:e0003923. doi: 10.1128/jcm.00039.
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  17. ZHU Y, Hager KM, Manjari SR, Banavali NK, et al
    Development and Validation of TaqMan Chemistry Probe-Based Rapid Assay for the Detection of Echinocandin-Resistance in Candida auris.
    J Clin Microbiol. 2023 Mar 28:e0176722. doi: 10.1128/jcm.01767.
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  18. GRAMS TR, Kim DY, McElvania E
    The Brief Case: Bergeyella zoohelcum Bacteremia in an Immunocompromised 69-Year-Old Patient.
    J Clin Microbiol. 2023;61:e0040822.
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  19. GRAMS TR, Kim DY, McElvania E
    Closing the Brief Case: Bergeyella zoohelcum Bacteremia in an Immunocompromised 69-Year-Old Patient.
    J Clin Microbiol. 2023;61:e0040922.
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  20. WALTERS C, Chen J, Stroika S, Katz LS, et al
    Genome Sequences from a Reemergence of Vibrio cholerae in Haiti, 2022 Reveal Relatedness to Previously Circulating Strains.
    J Clin Microbiol. 2023;61:e0014223.
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  21. NOPARATVARAKORN C, Sengyee S, Yarasai A, Phunpang R, et al
    Prospective Analysis of Antibody Diagnostic Tests and TTS1 Real-Time PCR for Diagnosis of Melioidosis in Areas Where It Is Endemic.
    J Clin Microbiol. 2023;61:e0160522.
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  22. WANG J, Guo K, Li S, Liu D, et al
    Development and Application of Real-Time PCR Assay for Detection of Salmonella Abortusequi.
    J Clin Microbiol. 2023;61:e0137522.
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  23. KANWAR N, Jackson J, Bardsley T, Pavia A, et al
    Impact of Rapid Molecular Multiplex Gastrointestinal Pathogen Testing in Management of Children during a Shigella Outbreak.
    J Clin Microbiol. 2023;61:e0165222.
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  24. LILLIS RA, Parker RL, Ackerman R, Ackerman J, et al
    Clinical Evaluation of a New Molecular Test for the Detection of Organisms Causing Vaginitis and Vaginosis.
    J Clin Microbiol. 2023;61:e0174822.
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  25. GORANSSON J, Sundqvist M, Ghaderi E, Lisby JG, et al
    Performance of a System for Rapid Phenotypic Antimicrobial Susceptibility Testing of Gram-Negative Bacteria Directly from Positive Blood Culture Bottles.
    J Clin Microbiol. 2023;61:e0152522.
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  26. SCHILDKRAUT JA, Coolen JPM, Severin H, Koenraad E, et al
    MGIT Enriched Shotgun Metagenomics for Routine Identification of Nontuberculous Mycobacteria: a Route to Personalized Health Care.
    J Clin Microbiol. 2023;61:e0131822.
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  27. TRECOURT A, Rabodonirina M, Mauduit C, Traverse-Glehen A, et al
    Fungal Integrated Histomolecular Diagnosis Using Targeted Next-Generation Sequencing on Formalin-Fixed Paraffin-Embedded Tissues.
    J Clin Microbiol. 2023;61:e0152022.
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  28. SYED RR, Catanzaro DG, Colman RE, Cooney CG, et al
    Clinical Evaluation of the XDR-LFC Assay for the Molecular Detection of Isoniazid, Rifampin, Fluoroquinolone, Kanamycin, Capreomycin, and Amikacin Drug Resistance in a Prospective Cohort.
    J Clin Microbiol. 2023;61:e0147822.
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  29. WAITES KB, Crabb DM, Ratliff AE, Geisler WM, et al
    Latest Advances in Laboratory Detection of Mycoplasma genitalium.
    J Clin Microbiol. 2023;61:e0079021.
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  30. LU P, Wu K, Zhou H, Yu H, et al
    Evaluation of ESAT6-CFP10 Skin Test for Mycobacterium tuberculosis Infection among Persons Living with HIV in China.
    J Clin Microbiol. 2023 Mar 22:e0181622. doi: 10.1128/jcm.01816.
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  31. PUTNAM NE, Youn JH, Wallace MA, Luethy PM, et al
    Comparative Evaluation of Current Biochemical-, Sequencing-, and Proteomic-Based Identification Methods for the Streptococcus bovis Group.
    J Clin Microbiol. 2023 Mar 13:e0171222. doi: 10.1128/jcm.01712.
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  32. BLANCHARD LS, Armstrong TP, Kresken M, Emery CL, et al
    Multicenter Clinical Evaluation of ETEST Eravacycline for Susceptibility Testing of Enterobacteriaceae and Enterococci.
    J Clin Microbiol. 2023 Mar 6:e0165022. doi: 10.1128/jcm.01650.
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    February 2023
  33. NILGIRIWALA K, Rabodoarivelo MS, Hall MB, Patel G, et al
    Genomic Sequencing from Sputum for Tuberculosis Disease Diagnosis, Lineage Determination, and Drug Susceptibility Prediction.
    J Clin Microbiol. 2023 Feb 23:e0157822. doi: 10.1128/jcm.01578.
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  34. HELLMANN KT, Challagundla L, Gray BM, Robinson DA, et al
    Improved Genomic Prediction of Staphylococcus epidermidis Isolation Sources with a Novel Polygenic Score.
    J Clin Microbiol. 2023 Feb 22:e0141222. doi: 10.1128/jcm.01412.
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  35. ALONSO ACERO L, Roman Soto S, Rico Nieto A
    Answer to February 2023 Photo Quiz.
    J Clin Microbiol. 2023;61:e0039022.
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  36. ALONSO ACERO L, Roman Soto S, Rico Nieto A
    Photo Quiz: a Sticky Foe.
    J Clin Microbiol. 2023;61:e0039122.
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  37. MISRA A, Yetmar ZA, Milone AA, Ruefthaler LA, et al
    The Brief Case: the Cryptic Cryptococcus.
    J Clin Microbiol. 2023;61:e0054822.
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  38. RANGANATH N, Shirley JD, Challener DW, Stevens RW, et al
    Leptotrichia Bacteremia: 10-Year Retrospective Clinical Analysis and Antimicrobial Susceptibility Profiles.
    J Clin Microbiol. 2023;61:e0173322.
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  39. KRITIKOS A, Caruana G, Poissy J, Mamin A, et al
    Comparison of Three beta-Glucan Tests for the Diagnosis of Invasive Candidiasis in Intensive Care Units.
    J Clin Microbiol. 2023;61:e0169122.
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  40. MEYER S, Puechal X, Quesne G, Marques I, et al
    Contribution of PCR to Differential Diagnosis between Patients with Whipple Disease and Tropheryma whipplei Carriers.
    J Clin Microbiol. 2023;61:e0145722.
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  41. HOENIGL M, Egger M, Price J, Krause R, et al
    Metagenomic Next-Generation Sequencing of Plasma for Diagnosis of COVID-19-Associated Pulmonary Aspergillosis.
    J Clin Microbiol. 2023 Feb 21:e0185922. doi: 10.1128/jcm.01859.
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  42. LAURENTIE J, Mourand G, Grippon P, Furlan S, et al
    Determination of Epidemiological Cutoff Values for Antimicrobial Resistance of Enterococcus cecorum.
    J Clin Microbiol. 2023 Feb 16:e0144522. doi: 10.1128/jcm.01445.
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    January 2023
  43. TETZ G, Kardava K, Vecherkovskaya M, Hahn A, et al
    AtbFinder Diagnostic Test System Improves Optimal Selection of Antibiotic Therapy in Persons with Cystic Fibrosis.
    J Clin Microbiol. 2023;61:e0155822.
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  44. RODRIGUEZ-TEMPORAL D, Herrera L, Alcaide F, Domingo D, et al
    Identification of Mycobacterium abscessus Subspecies by MALDI-TOF Mass Spectrometry and Machine Learning.
    J Clin Microbiol. 2023;61:e0111022.
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  45. WAGNER GE, Berner A, Lipp M, Kohler C, et al
    Protein Microarray-Guided Development of a Highly Sensitive and Specific Dipstick Assay for Glanders Serodiagnostics.
    J Clin Microbiol. 2023;61:e0123422.
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  46. YU HJ, Kim TY, Kim G, Shim HJ, et al
    Performance Evaluation of the BACTEC MGIT 960 System for Rifampin Drug-Susceptibility Testing of Mycobacterium tuberculosis Using the Current WHO Critical Concentration.
    J Clin Microbiol. 2023 Jan 5:e0108622. doi: 10.1128/jcm.01086.
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    December 2022
  47. JHAVERI TA, Williams S, Kancharla S, Frame IJ, et al
    The Brief Case: Delayed Diagnosis of Cutaneous Mycobacterial Infection in Rural Mississippi.
    J Clin Microbiol. 2022;60:e0030722.
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  48. JHAVERI TA, Williams S, Kancharla S, Frame IJ, et al
    Closing the Brief Case: Delayed Diagnosis of Cutaneous Mycobacterial Infection in Rural Mississippi.
    J Clin Microbiol. 2022;60:e0030822.
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  49. HERRERA LN, Hooper K, Ahmed H, Hofmann J, et al
    Answer to December 2022 Photo Quiz.
    J Clin Microbiol. 2022;60:e0079922.
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  50. THWE PM, Faron ML, Pride DT, Cruz A, et al
    Multicenter Evaluation of the Cepheid Xpert GBS LB XC Test.
    J Clin Microbiol. 2022;60:e0135622.
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  51. SAPKOTA J, Hasan R, Onsare R, Arafah S, et al
    Comparative Analysis of Commercially Available Typhoid Point-of-Care Tests: Results of a Prospective and Hybrid Retrospective Multicenter Diagnostic Accuracy Study in Kenya and Pakistan.
    J Clin Microbiol. 2022;60:e0100022.
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  52. IMBERT S, Portejoie L, Pfister E, Tauzin B, et al
    A Multiplex PCR and DNA-Sequencing Workflow on Serum for the Diagnosis and Species Identification for Invasive Aspergillosis and Mucormycosis.
    J Clin Microbiol. 2022 Dec 19:e0140922. doi: 10.1128/jcm.01409.
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  53. KALIZANG'OMA A, Kwambana-Adams B, Chan JM, Viswanath A, et al
    Novel Multilocus Sequence Typing and Global Sequence Clustering Schemes for Characterizing the Population Diversity of Streptococcus mitis.
    J Clin Microbiol. 2022 Dec 14:e0080222. doi: 10.1128/jcm.00802.
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    November 2022
  54. ABE R, Akeda Y, Sakamoto N, Takeuchi D, et al
    A Nationwide Plasmidome Surveillance in Thailand Reveals a Limited Variety of New Delhi Metallo-beta-Lactamase-Producing Carbapenem-Resistant Enterobacteriaceae Clones and Spreading Plasmids.
    J Clin Microbiol. 2022 Nov 29:e0108022. doi: 10.1128/jcm.01080.
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  55. MCCORMICK-BAW C, Clark AE, Knights S, Perl T, et al
    Closing the Brief Case: Encephalitis in a West Texas Woman.
    J Clin Microbiol. 2022;60:e0228621.
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  56. MCCORMICK-BAW C, Clark A, Knights S, Perl T, et al
    The Brief Case: Encephalitis in a West Texas Woman.
    J Clin Microbiol. 2022;60:e0227121.
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  57. FOX-LEWIS A, Wang J, Strydom H, Wright J, et al
    False Negative Escherichia coli Result from the BioFire FilmArray Blood Culture Identification 2 Panel.
    J Clin Microbiol. 2022;60:e0233921.
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  58. AERTS R, Mercier T, Houben E, Schauwvlieghe A, et al
    Performance of the JF5-Based Galactomannoprotein EIA Compared to the Lateral Flow Device and the Galactomannan EIA in Serum and Bronchoalveolar Lavage Fluid.
    J Clin Microbiol. 2022;60:e0094822.
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  59. BURNS BL, Rhoads DD
    Meningococcal Urethritis: Old and New.
    J Clin Microbiol. 2022;60:e0057522.
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  60. BARKER KR, Kus JV, Normand AC, Gharabaghi F, et al
    A Practical Workflow for the Identification of Aspergillus, Fusarium, Mucorales by MALDI-TOF MS: Database, Medium, and Incubation Optimization.
    J Clin Microbiol. 2022 Nov 3:e0103222. doi: 10.1128/jcm.01032.
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  61. GARDETTE M, Henin N, Le Roy C, Guiraud J, et al
    Clinical Performance of Three Commercial Molecular Diagnostic Assays for the Detection of Fluoroquinolone Resistance-Associated Mutations in Mycoplasma genitalium.
    J Clin Microbiol. 2022 Nov 2:e0113522. doi: 10.1128/jcm.01135.
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    October 2022
  62. CHU CM, Woo PCY, Chong KTK, Leung WS, et al
    Retraction for Chu et al., "Association of Presence of Aspergillus Antibodies with Hemoptysis in Patients with Old Tuberculosis or Bronchiectasis but No Radiologically Visible Mycetoma".
    J Clin Microbiol. 2022 Oct 31:e0142822. doi: 10.1128/jcm.01428.
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  63. MALDONADO-BARRUECO A, Grandioso-Vas D, Rico-Nieto A, Garcia-Rodriguez J, et al
    Closing Brief Case: Proteus mirabilis Causing Coraliform Lithiasis and Bacteremia in an Elderly Catheterized Patient.
    J Clin Microbiol. 2022;60:e0241421.
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  64. MALDONADO-BARRUECO A, Grandioso-Vas D, Rico-Nieto A, Garcia-Rodriguez J, et al
    The Brief Case: Proteus mirabilis Causing Coraliform Lithiasis and Bacteremia in an Elderly Catheterized Patient.
    J Clin Microbiol. 2022;60:e0241321.
    >> Share

  65. DATTA K, LaRue R, Permpalung N, Das S, et al
    Development of an Interferon-Gamma Release Assay (IGRA) to Aid Diagnosis of Histoplasmosis.
    J Clin Microbiol. 2022;60:e0112822.
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  66. DUNMIRE CN, Chac D, Chowdhury F, Khan AI, et al
    Vibrio cholerae Isolation from Frozen Vomitus and Stool Samples.
    J Clin Microbiol. 2022;60:e0108422.
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  67. FIDA M, Misra A, Harring JA, Kubbara A, et al
    Histoplasma capsulatum Complement Fixation and Immunodiffusion Assay Sensitivity in Culture-Confirmed Cases of Histoplasmosis: a 10-Year Retrospective Review (2011 to 2020).
    J Clin Microbiol. 2022;60:e0105722.
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  68. LUCIGNANO B, Cento V, Agosta M, Ambrogi F, et al
    Effective Rapid Diagnosis of Bacterial and Fungal Bloodstream Infections by T2 Magnetic Resonance Technology in the Pediatric Population.
    J Clin Microbiol. 2022;60:e0029222.
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    September 2022
  69. RANSOM EM, Burnham CD
    Routine Use of Anaerobic Blood Culture Bottles for Specimens Collected from Adults and Children Enhances Microorganism Recovery and Improves Time to Positivity.
    J Clin Microbiol. 2022;60:e0050022.
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  70. WANG SH, Rajaram MVS, Trollip A, Wu Q, et al
    Novel Automation of an Enzyme-Linked Immunosorbent Spot Assay Testing Method: Comparable Diagnostic Performance of the T-SPOT.TB Test Using Manual Density Gradient Cell Isolation versus Automated Positive Selection with the T-Cell Select Kit.
    J Clin Microbiol. 2022;60:e0055122.
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  71. TONEY NC, Zhu W, Jensen B, Gartin J, et al
    Evaluation of MALDI Biotyper Mycobacteria Library for Identification of Nontuberculous Mycobacteria.
    J Clin Microbiol. 2022;60:e0021722.
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    August 2022
  72. FLURIN L, Wolf MJ, Fisher CR, Cano Cevallos EJ, et al
    Pathogen Detection in Infective Endocarditis Using Targeted Metagenomics on Whole Blood and Plasma: a Prospective Pilot Study.
    J Clin Microbiol. 2022 Aug 30:e0062122. doi: 10.1128/jcm.00621.
    >> Share

  73. HYCHE MH, Kent P, Schammel CMG, Devane M, et al
    The Brief Case: Tropheryma whipplei Infection Resulting in Neurological Symptoms.
    J Clin Microbiol. 2022;60:e0147821.
    >> Share

  74. HYCHE MH, Kent P, Schammel CMG, Devane M, et al
    Closing the Brief Case: Tropheryma whipplei Infection Resulting in Neurological Symptoms.
    J Clin Microbiol. 2022;60:e0159521.
    >> Share

  75. TRUONG TT, Mongkolrattanothai K, Flores II, Dien Bard J, et al
    Evaluation of the Performance and Clinical Impact of a Rapid Phenotypic Susceptibility Testing Method Directly from Positive Blood Culture at a Pediatric Hospital.
    J Clin Microbiol. 2022;60:e0012222.
    >> Share

  76. SHAPIRO AE, Olson AM, Kidoguchi L, Niu X, et al
    Complementary Nonsputum Diagnostic Testing for Tuberculosis in People with HIV Using Oral Swab PCR and Urine Lipoarabinomannan Detection.
    J Clin Microbiol. 2022 Aug 1:e0043122. doi: 10.1128/jcm.00431.
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    July 2022
  77. NGANGUE YR, Mbuli C, Neh A, Nshom E, et al
    Diagnostic Accuracy of the Truenat MTB Plus Assay and Comparison with the Xpert MTB/RIF Assay to Detect Tuberculosis among Hospital Outpatients in Cameroon.
    J Clin Microbiol. 2022 Jul 21:e0015522. doi: 10.1128/jcm.00155.
    >> Share

  78. AGARWAL AN, Chandler B, Dallas SD, Wiederhold NP, et al
    Closing the Brief Case: Histoplasma duboisii-an Infection with a Rare Organism Presenting as an Abdominal Mass.
    J Clin Microbiol. 2022;60:e0120221.
    >> Share

  79. AGARWAL AN, Chandler B, Dallas SD, Wiederhold NP, et al
    The Brief Case: Histoplasma duboisii-an Infection with a Rare Organism Presenting as an Abdominal Mass.
    J Clin Microbiol. 2022;60:e0120121.
    >> Share

  80. ULRICH PS, Bastian IN, Chen DJ
    Clinical Significance of BD Bactec FX Blood Culture Incubation Beyond 96 Hours (4 Days).
    J Clin Microbiol. 2022;60:e0054922.
    >> Share

  81. BUDACHETRI K, Lin M, Yan Q, Chien RC, et al
    Real-Time PCR Differential Detection of Neorickettsia findlayensis and N. risticii in Cases of Potomac Horse Fever.
    J Clin Microbiol. 2022;60:e0025022.
    >> Share

  82. TOLPINRUD A, Stenos J, Chaber AL, Devlin JM, et al
    Validation of an Indirect Immunofluorescence Assay and Commercial Q Fever Enzyme-Linked Immunosorbent Assay for Use in Macropods.
    J Clin Microbiol. 2022;60:e0023622.
    >> Share

  83. WEIDMANN MD, Berry GJ, Zucker JE, Huang S, et al
    Bacterial Pneumonia and Respiratory Culture Utilization among Hospitalized Patients with and without COVID-19 in a New York City Hospital.
    J Clin Microbiol. 2022;60:e0017422.
    >> Share

    June 2022
  84. ANDAMA A, Whitman GR, Crowder R, Reza TF, et al
    Accuracy of Tongue Swab Testing Using Xpert MTB-RIF Ultra for Tuberculosis Diagnosis.
    J Clin Microbiol. 2022 Jun 27:e0042122. doi: 10.1128/jcm.00421.
    >> Share

  85. RUZIN A, Barraud O, Yu L, Francois B, et al
    Performance of the Cepheid Methicillin-Resistant Staphylococcus aureus/S. aureus Skin and Soft Tissue Infection PCR Assay on Respiratory Samples from Mechanically Ventilated Patients for S. aureus Screening during the Phase 2 Double-Blind SAATELLITE S
    J Clin Microbiol. 2022 Jun 27:e0034722. doi: 10.1128/jcm.00347.
    >> Share

  86. GOER A, Blanchard LS, Van Belkum A, Loftus KJ, et al
    Multicenter Evaluation of the Novel ETEST Fosfomycin for Antimicrobial Susceptibility Testing of Enterobacterales, Enterococcus faecalis, and Staphylococcus Species.
    J Clin Microbiol. 2022 Jun 23:e0002122. doi: 10.1128/jcm.00021.
    >> Share

  87. AHMAD Y, Gaston DC, Gray J, Zhong D, et al
    Closing the Brief Case: The Fly Who Cried Wohlf.
    J Clin Microbiol. 2022;60:e0108121.
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  88. AHMAD Y, Gaston DC, Gray J, Zhong D, et al
    The Brief Case: The Fly Who Cried Wohlf.
    J Clin Microbiol. 2022;60:e0107321.
    >> Share

  89. HOGAN CA, Hitchcock MM, Frost S, Kapphahn K, et al
    Clinical Outcomes of Treated and Untreated C. difficile PCR-Positive/Toxin-Negative Adult Hospitalized Patients: a Quasi-Experimental Noninferiority Study.
    J Clin Microbiol. 2022;60:e0218721.
    >> Share

  90. SIRLUCK-SCHROEDER I, Al-Rawahi GN, Gadkar V, Hoang L, et al
    Limitation of ctrA as a Target for Neisseria meningitidis Identification and Potential Alternative Targets.
    J Clin Microbiol. 2022;60:e0015222.
    >> Share

  91. COMBA IY, Schuetz AN, Misra A, Friedman DZP, et al
    Antimicrobial Susceptibility of Elizabethkingia Species: Report from a Reference Laboratory.
    J Clin Microbiol. 2022;60:e0254121.
    >> Share

  92. BARBEE LA, Soge OO, Khosropour CM, LeClair A, et al
    Time to Clearance of Neisseria gonorrhoeae RNA at the Pharynx following Treatment.
    J Clin Microbiol. 2022;60:e0039922.
    >> Share

  93. GARRIGOS T, Dollat M, Magallon A, Folletet A, et al
    Distribution of Achromobacter Species in 12 French Cystic Fibrosis Centers in 2020 by a Retrospective MALDI-TOF MS Spectrum Analysis.
    J Clin Microbiol. 2022;60:e0242221.
    >> Share

  94. PASSARIS I, Mauder N, Kostrzewa M, Burckhardt I, et al
    Validation of Fourier Transform Infrared Spectroscopy for Serotyping of Streptococcus pneumoniae.
    J Clin Microbiol. 2022 Jun 14:e0032522. doi: 10.1128/jcm.00325.
    >> Share

  95. KHAN A, Miller WR, Axell-House D, Munita JM, et al
    Antimicrobial Susceptibility Testing for Enterococci.
    J Clin Microbiol. 2022 Jun 13:e0084321. doi: 10.1128/jcm.00843.
    >> Share

    May 2022
  96. TIBBETTS R, George S, Burwell R, Rajeev L, et al
    Performance of the Reveal Rapid Antibiotic Susceptibility Testing System on Gram-Negative Blood Cultures at a Large Urban Hospital.
    J Clin Microbiol. 2022 May 24:e0009822. doi: 10.1128/jcm.00098.
    >> Share

  97. LANDIS M, Rogovskyy AS
    The Brief Case: Brucella suis Infection in a Household of Dogs.
    J Clin Microbiol. 2022;60:e0098421.
    >> Share

  98. LANDIS M, Rogovskyy AS
    Closing the Brief Case: Brucella suis Infection in a Household of Dogs.
    J Clin Microbiol. 2022;60:e0098521.
    >> Share

  99. SFEIR MM, Meece JK, Theel ES, Granger D, et al
    Multicenter Clinical Evaluation of Modified Two-Tiered Testing Algorithms for Lyme Disease Using Zeus Scientific Commercial Assays.
    J Clin Microbiol. 2022;60:e0252821.
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  100. GRINBERG S, Schubert S, Hochauf-Stange K, Dalpke AH, et al
    Saving Time in Blood Culture Diagnostics: a Prospective Evaluation of the Qvella FAST-PBC Prep Application on the Fast System.
    J Clin Microbiol. 2022;60:e0253321.
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  101. MORENO A, Epstein D, Budvytiene I, Banaei N, et al
    Accuracy of Pneumocystis jirovecii Plasma Cell-Free DNA PCR for Noninvasive Diagnosis of Pneumocystis Pneumonia.
    J Clin Microbiol. 2022;60:e0010122.
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  102. DINGLE TC, Gamage D, Gomez-Villegas S, Hanson BM, et al
    Prevalence and Characterization of the Cefazolin Inoculum Effect in North American Methicillin-Susceptible Staphylococcus aureus Isolates.
    J Clin Microbiol. 2022 May 17:e0249521. doi: 10.1128/jcm.02495.
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  103. FRIAES A, Mamede R, Ferreira M, Melo-Cristino J, et al
    Annotated Whole-Genome Multilocus Sequence Typing Schema for Scalable High-Resolution Typing of Streptococcus pyogenes.
    J Clin Microbiol. 2022 May 9:e0031522. doi: 10.1128/jcm.00315.
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    April 2022
  104. BUCHAN BW
    Commentary: Can Automated Blood Culture Systems Be Both New and Improved?
    J Clin Microbiol. 2022;60:e0019222.
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  105. ALEXANDER DC, Taylor RM, Martin I, Adam H, et al
    Evaluation of the Hologic Aptima Combo 2 Assay for Detection of Neisseria gonorrhoeae from Joint Fluid Specimens.
    J Clin Microbiol. 2022;60:e0253021.
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  106. SALADO-RASMUSSEN K, Tolstrup J, Sedeh FB, Larsen HK, et al
    Clinical Importance of Superior Sensitivity of the Aptima TMA-Based Assays for Mycoplasma genitalium Detection.
    J Clin Microbiol. 2022;60:e0236921.
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  107. EBERLY AR, Wallace MA, Shannon S, Heitman AK, et al
    Development and Validation of a Novel Anaerobic Carbapenem Inactivation Method (Ana-CIM) for the Detection of Carbapenemase Production in Bacteroides fragilis.
    J Clin Microbiol. 2022;60:e0218821.
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  108. SHALLOM SJ, Zelazny AM
    Detection of Mixed Populations of Clarithromycin-Susceptible and -Resistant Mycobacterium abscessus Strains.
    J Clin Microbiol. 2022;60:e0169421.
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  109. VERWAY M, Brown KA, Marchand-Austin A, Diong C, et al
    Prevalence and Mortality Associated with Bloodstream Organisms: a Population-Wide Retrospective Cohort Study.
    J Clin Microbiol. 2022;60:e0242921.
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  110. CARVALHAES CG, Klauer AL, Rhomberg PR, Pfaller MA, et al
    Evaluation of Rezafungin Provisional CLSI Clinical Breakpoints and Epidemiological Cutoff Values Tested against a Worldwide Collection of Contemporaneous Invasive Fungal Isolates (2019 to 2020).
    J Clin Microbiol. 2022;60:e0244921.
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  111. CENTURIONI DA, Egan CT, Perry MJ
    Current Developments in Diagnostic Assays for Laboratory Confirmation and Investigation of Botulism.
    J Clin Microbiol. 2022;60:e0013920.
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  112. DIRIX V, Dauby N, Hites M, Watelet E, et al
    Optimal Detection of Latent Mycobacterium tuberculosis Infection by Combined Heparin-Binding Hemagglutinin (HBHA) and Early Secreted Antigenic Target 6 (ESAT-6) Whole-Blood Interferon Gamma Release Assays.
    J Clin Microbiol. 2022 Apr 18:e0244321. doi: 10.1128/jcm.02443.
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  113. BADALI H, Canete-Gibas C, McCarthy D, Patterson H, et al
    Species Distribution and Antifungal Susceptibilities of Aspergillus Section Fumigati Isolates in Clinical Samples from the United States.
    J Clin Microbiol. 2022 Apr 11:e0028022. doi: 10.1128/jcm.00280.
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    March 2022
  114. EGGER M, Penziner S, Dichtl K, Gornicec M, et al
    Performance of the Euroimmun Aspergillus Antigen ELISA for the Diagnosis of Invasive Pulmonary Aspergillosis in Bronchoalveolar Lavage Fluid.
    J Clin Microbiol. 2022 Mar 30:e0021522. doi: 10.1128/jcm.00215.
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  115. GIACOBBE DR, Prattes J, Wauters J, Dettori S, et al
    Prognostic Impact of Bronchoalveolar Lavage Fluid Galactomannan and Aspergillus Culture Results on Survival in COVID-19 Intensive Care Unit Patients: a Post Hoc Analysis from the European Confederation of Medical Mycology (ECMM) COVID-19-Associated Pu
    J Clin Microbiol. 2022 Mar 24:e0229821. doi: 10.1128/jcm.02298.
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  116. PLOURDE AR, Hall CR, McElvania E
    The Brief Case: A Real Pain in the Testicle-a Case of Extrapulmonary Mycobacterium tuberculosis.
    J Clin Microbiol. 2022;60:e0060221.
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  117. PLOURDE AR, Hall CR, McElvania E
    Closing the Brief Case: A Real Pain in the Testicle-a Case of Extrapulmonary Mycobacterium tuberculosis.
    J Clin Microbiol. 2022;60:e0061221.
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  118. CHAVEZ MA, Munigala S, Burnham CA, Yarbrough ML, et al
    The Impact of Implementing the Virtuo Blood Culture System on the Characteristics and Management of Patients with Staphylococcus aureus Bacteremia.
    J Clin Microbiol. 2022 Mar 16:e0226121. doi: 10.1128/jcm.02261.
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  119. GILL A, Dussault F, McMahon T, Petronella N, et al
    Characterization of Atypical Shiga Toxin Gene Sequences and Description of Stx2j, a New Subtype.
    J Clin Microbiol. 2022;60:e0222921.
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  120. BRAUN P, Beyer W, Hanczaruk M, Riehm JM, et al
    Reoccurring Bovine Anthrax in Germany on the Same Pasture after 12 Years.
    J Clin Microbiol. 2022;60:e0229121.
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  121. HERNANDEZ-GARCIA M, Castillo-Polo JA, Cordero DG, Perez-Viso B, et al
    Impact of Ceftazidime-Avibactam Treatment in the Emergence of Novel KPC Variants in the ST307-Klebsiella pneumoniae High-Risk Clone and Consequences for Their Routine Detection.
    J Clin Microbiol. 2022;60:e0224521.
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  122. HADDAD NS, Nozick S, Kim G, Ohanian S, et al
    Detection of Newly Secreted Antibodies Predicts Nonrecurrence in Primary Clostridioides difficile Infection.
    J Clin Microbiol. 2022;60:e0220121.
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  123. WEBB JR, Mayo M, Rachlin A, Woerle C, et al
    Genomic Epidemiology Links Burkholderia pseudomallei from Individual Human Cases to B. pseudomallei from Targeted Environmental Sampling in Northern Australia.
    J Clin Microbiol. 2022;60:e0164821.
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  124. FABRE V, Carroll KC, Cosgrove SE
    Blood Culture Utilization in the Hospital Setting: a Call for Diagnostic Stewardship.
    J Clin Microbiol. 2022;60:e0100521.
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    February 2022
  125. COX H, Goig GA, Salaam-Dreyer Z, Dippenaar A, et al
    Whole genome sequencing has the potential to improve treatment for rifampicin-resistant tuberculosis in high burden settings: a retrospective cohort study.
    J Clin Microbiol. 2022 Feb 16:jcm0236221. doi: 10.1128/jcm.02362.
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  126. ROGOVSKYY AS, Bailey LK, Blazier JC, Cai JJ, et al
    The Brief Case: Corynebacterium amycolatum in a Relapsing Urinary Tract Infection of a Feline Patient.
    J Clin Microbiol. 2022;60:e0045321.
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  127. ARMSTRONG DT, Fisher S, Totten M, Schwartz M, et al
    Clinical Validation of the Xpert MTB/RIF Test for Identification of the Mycobacterium tuberculosis Complex in Acid-Fast Bacillus Smear-Positive MGIT Broth Cultures.
    J Clin Microbiol. 2022;60:e0216421.
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  128. EKWALL-LARSON A, Yu D, Dinnetz P, Nordqvist H, et al
    Single-Site Sampling versus Multisite Sampling for Blood Cultures: a Retrospective Clinical Study.
    J Clin Microbiol. 2022;60:e0193521.
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  129. RETCHLESS AC, Itsko M, Bazan JA, Turner AN, et al
    Evaluation of Urethrotropic-Clade Meningococcal Infection by Urine Metagenomic Shotgun Sequencing.
    J Clin Microbiol. 2022;60:e0173221.
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  130. MEHTA N, Wang T, Friedman-Moraco RJ, Carpentieri C, et al
    Fecal Microbiota Transplantation Donor Screening Updates and Research Gaps for Solid Organ Transplant Recipients.
    J Clin Microbiol. 2022;60:e0016121.
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    January 2022
  131. HAUSER N, Werzen A, Rapaka RR
    Closing the Brief Case: Streptococcus intermedius Brain Abscesses in an Otherwise Healthy Young Man Diagnosed by 16S rRNA Gene Sequencing.
    J Clin Microbiol. 2022;60:e0197920.
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  132. HAUSER N, Werzen A, Rapaka RR
    The Brief Case: Streptococcus intermedius Brain Abscesses in an Otherwise Healthy Young Man Diagnosed by 16S rRNA Gene Sequencing.
    J Clin Microbiol. 2022;60:e0197020.
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  133. DAVIDSON RM, Nick SE, Kammlade SM, Vasireddy S, et al
    Genomic Analysis of a Hospital-Associated Outbreak of Mycobacterium abscessus: Implications on Transmission.
    J Clin Microbiol. 2022;60:e0154721.
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  134. KANIGA K, Hasan R, Jou R, Vasiliauskiene E, et al
    Bedaquiline Drug Resistance Emergence Assessment in Multidrug-Resistant Tuberculosis (MDR-TB): a 5-Year Prospective In Vitro Surveillance Study of Bedaquiline and Other Second-Line Drug Susceptibility Testing in MDR-TB Isolates.
    J Clin Microbiol. 2022;60:e0291920.
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  135. PHOLWAT S, Liu J, Taniuchi M, Haque R, et al
    Use of Molecular Methods To Detect Shigella and Infer Phenotypic Resistance in a Shigella Treatment Study.
    J Clin Microbiol. 2022;60:e0177421.
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  136. FORSTER J, Koc O, Koeppel MB, Hamprecht A, et al
    beta-1,3-d-Glucan and Galactomannan as Biomarkers for the Detection of Invasive Geotrichum and Magnusiomyces Infections: a Retrospective Evaluation.
    J Clin Microbiol. 2022;60:e0160721.
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  137. DELLIERE S, Dudoignon E, Voicu S, Collet M, et al
    Combination of mycological criteria: a better surrogate to identify COVID-19 associated pulmonary aspergillosis patients and evaluate prognosis?
    J Clin Microbiol. 2022 Jan 5:JCM0216921. doi: 10.1128/JCM.02169.
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  138. LOCKHART SR, Lyman MM, Sexton DJ
    Tools for detecting a "superbug": updates on Candida auris testing.
    J Clin Microbiol. 2022 Jan 5:jcm0080821. doi: 10.1128/jcm.00808.
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    December 2021
  139. ZIMMER AJ, Lainati F, Aguilera Vasquez N, Chedid C, et al
    Biomarkers that correlate with active pulmonary tuberculosis treatment response: a systematic review and meta-analysis.
    J Clin Microbiol. 2021 Dec 15:JCM0185921. doi: 10.1128/JCM.01859.
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  140. FREITAS BL, Leach L, Chaturvedi V, Chaturvedi S, et al
    Reverse Transcription-Quantitative real-time PCR (RT-qPCR) Assay for the Rapid Enumeration of Live Candida auris from the Healthcare Environment.
    J Clin Microbiol. 2021 Dec 8:JCM0077921. doi: 10.1128/JCM.00779.
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  141. TAKEDA K, Suzuki J, Watanabe A, Narumoto O, et al
    Non-fumigatus Aspergillus infection associated with a negative Aspergillus precipitin test in patients with chronic pulmonary aspergillosis.
    J Clin Microbiol. 2021 Dec 8:JCM0201821. doi: 10.1128/JCM.02018.
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    November 2021
  142. ARMSTRONG DT, Tacheny EA, Olinger G, Howard R, et al
    SARS-CoV-2 Supply Shortages and Tuberculosis Diagnostics: Current Issues Requiring Immediate Solutions.
    J Clin Microbiol. 2021;59:e0077821.
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  143. KIM MK, Smedberg JR, Boyce RM, Miller MB, et al
    The Brief Case: "Great Pretender"-Disseminated Blastomycosis in Western North Carolina.
    J Clin Microbiol. 2021;59:e0304920.
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  144. BOKMA J, Vereecke N, Pas ML, Chantillon L, et al
    Evaluation of Nanopore Sequencing as a Diagnostic Tool for the Rapid Identification of Mycoplasma bovis from Individual and Pooled Respiratory Tract Samples.
    J Clin Microbiol. 2021;59:e0111021.
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  145. GUGLIELMINI J, Hennart M, Badell E, Toubiana J, et al
    Genomic Epidemiology and Strain Taxonomy of Corynebacterium diphtheriae.
    J Clin Microbiol. 2021;59:e0158121.
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  146. HUSE HK, Lee MJ, Wootton M, Sharp SE, et al
    Evaluation of Antimicrobial Susceptibility Testing Methods for Burkholderia cenocepacia and Burkholderia multivorans Isolates from Cystic Fibrosis Patients.
    J Clin Microbiol. 2021;59:e0144721.
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  147. DEBES AK, Xiao S, Liu J, Shaffer A, et al
    Characterization of Enteric Disease in Children by Use of a Low-Cost Specimen Preservation Method.
    J Clin Microbiol. 2021;59:e0170321.
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  148. LABETOULLE R, Rigaill J, Lleres-Vadeboin M, Grattard F, et al
    Evaluation of the MRSA/SA ELITe MGB assay for the detection of Staphylococcus aureus in bone and joint infections.
    J Clin Microbiol. 2021 Nov 17:JCM0083521. doi: 10.1128/JCM.00835.
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  149. VAN HAREN MHI, de Groot T, Spruijtenburg B, Jain K, et al
    Development of a multiplex PCR short tandem repeat typing scheme for Candida krusei.
    J Clin Microbiol. 2021 Nov 17:JCM0203221. doi: 10.1128/JCM.02032.
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  150. WHITFIELD MG, Engelthaler DM, Allender C, Folkerts M, et al
    Comparative Performance of Genomic Methods for the Detection of Pyrazinamide Resistance and Heteroresistance in Mycobacterium tuberculosis.
    J Clin Microbiol. 2021 Nov 10:JCM0190721. doi: 10.1128/JCM.01907.
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  151. ADAMSON PC, Klausner JD
    Diagnostic tests for detecting Chlamydia trachomatis and Neisseria gonorrhoeae in rectal and pharyngeal specimens.
    J Clin Microbiol. 2021 Nov 3:JCM0021121. doi: 10.1128/JCM.00211.
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  152. VAN DER POL B, Chernesky M, Gaydos CA, Hook EW 3rd, et al
    Multicenter comparison of nucleic acid amplification tests for the diagnosis of rectal and oropharyngeal Chlamydia trachomatis and Neisseria gonorrhoeae infection.
    J Clin Microbiol. 2021 Nov 3:JCM0136321. doi: 10.1128/JCM.01363.
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    October 2021
  153. TEH JSK, Pantelis I, Chen X, Sadlon T, et al
    Antimicrobial Susceptibility Testing for Staphylococcus lugdunensis.
    J Clin Microbiol. 2021 Oct 27:JCM0320220. doi: 10.1128/JCM.03202.
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  154. KERSH EN, Shukla M, Raphael BH, Habel M, et al
    At-Home Specimen Self-Collection and Self-Testing for Sexually Transmitted Infection Screening Demand Accelerated by the COVID-19 Pandemic: a Review of Laboratory Implementation Issues.
    J Clin Microbiol. 2021;59:e0264620.
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  155. WOOD GE, Jensen NL, Astete S, Jensen JS, et al
    Azithromycin and Doxycycline Resistance Profiles of U.S. Mycoplasma genitalium Strains and Their Association with Treatment Outcomes.
    J Clin Microbiol. 2021;59:e0081921.
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  156. LIEBERMAN JA, Bryan A, Mays JA, Stephens K, et al
    High Clinical Impact of Broad-Range Fungal PCR in Suspected Fungal Sinusitis.
    J Clin Microbiol. 2021;59:e0095521.
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  157. RIVAS L, Paine S, Dupont PY, Tiong A, et al
    Genome Typing and Epidemiology of Human Listeriosis in New Zealand, 1999 to 2018.
    J Clin Microbiol. 2021;59:e0084921.
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  158. RADTKE FA, Ramadoss N, Garro A, Bennett JE, et al
    Serologic Response to Borrelia Antigens Varies with Clinical Phenotype in Children and Young Adults with Lyme Disease.
    J Clin Microbiol. 2021;59:e0134421.
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  159. NAKAUE R, Qin T, Morita M, Ren H, et al
    Development of a Multiplex-PCR Serotyping Assay for Characterizing Legionella pneumophila Serogroups Based on the Diversity of Lipopolysaccharide Biosynthetic Loci.
    J Clin Microbiol. 2021;59:e0015721.
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  160. AUTIER B, Prattes J, White PL, Valerio M, et al
    Aspergillus Lateral Flow Assay with Digital Reader for the Diagnosis of COVID-19 Associated Pulmonary Aspergillosis (CAPA): A multicenter study.
    J Clin Microbiol. 2021 Oct 13:JCM0168921. doi: 10.1128/JCM.01689.
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    September 2021
  161. BIZOT E, Cointe A, Smadja N, Sergentet D, et al
    Improved molecular diagnosis and culture of the emerging heteropathotype enterohemorrhagic Escherichia coli O80:H2 using its non-melibiose-fermenting and antibiotic-resistance properties.
    J Clin Microbiol. 2021 Sep 29:JCM0153021. doi: 10.1128/JCM.01530.
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  162. DUMM RE, Wing A, Richterman A, Jacob J, et al
    The Brief Case: A Variant on a Classic-Abiotrophia defectiva Endocarditis with Discitis.
    J Clin Microbiol. 2021;59:e0309320.
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  163. THEEL ES, Rodino KG, Granger D
    Detection of Blastomyces dermatitidis Antigen in Urine Using a Commercially Available Quantitative Enzyme Immunoassay.
    J Clin Microbiol. 2021;59:e0144421.
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  164. CHAVEZ MA, Munigala S, Burnham CD, Yarbrough ML, et al
    Real-World Evaluation of the Impact of Implementation of the Virtuo Blood Culture System in a Tertiary Care Hospital.
    J Clin Microbiol. 2021;59:e0061721.
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    August 2021
  165. BADALI H, Canete-Gibas C, McCarthy D, Patterson H, et al
    Epidemiology and Antifungal Susceptibilities of Mucoralean Fungi in Clinical Samples from the United States.
    J Clin Microbiol. 2021;59:e0123021.
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  166. WOLK DM, Young S, Whitfield NN, Reid JL, et al
    A Multicenter Clinical Study To Demonstrate the Diagnostic Accuracy of the GenMark Dx ePlex Blood Culture Identification Gram-Negative Panel.
    J Clin Microbiol. 2021;59:e0248420.
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  167. VAN GORKOM T, van Arkel GHJ, Heron M, Voet W, et al
    The Usefulness of Two CXCL13 Assays on Cerebrospinal Fluid for the Diagnosis of Lyme Neuroborreliosis: a Retrospective Study in a Routine Clinical Setting.
    J Clin Microbiol. 2021;59:e0025521.
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  168. RHOADS DD
    Stenotrophomonas maltophilia Susceptibility Testing Challenges and Strategies.
    J Clin Microbiol. 2021;59:e0109421.
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  169. WU X, Shen WJ, Deshpande A, Olaitan AO, et al
    The Integrity of Heme Is Essential for Reproducible Detection of Metronidazole-Resistant Clostridioides difficile by Agar Dilution Susceptibility Tests.
    J Clin Microbiol. 2021;59:e0058521.
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  170. RAMPACCI E, Trotta M, Fani C, Silvestri S, et al
    Comparative Performances of Vitek-2, Disk Diffusion, and Broth Microdilution for Antimicrobial Susceptibility Testing of Canine Staphylococcus pseudintermedius.
    J Clin Microbiol. 2021;59:e0034921.
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  171. HAMILTON R, Pandora TR, Parsonnet J, Martin IW, et al
    Clinical Decision Support Trees Can Help Optimize Utilization of Anaplasma phagocytophilum Nucleic Acid Amplification Testing.
    J Clin Microbiol. 2021;59:e0079121.
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  172. HSU AJ, Tamma PD, Zhang SX
    Challenges with Utilizing the 1,3-Beta-d-Glucan and Galactomannan Assays To Diagnose Invasive Mold Infections in Immunocompromised Children.
    J Clin Microbiol. 2021;59:e0327620.
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    May 2021
  173. SATYAPUTRA F, Hendry S, Braddick M, Sivabalan P, et al
    The laboratory diagnosis of Syphilis.
    J Clin Microbiol. 2021 May 12. pii: JCM.00100-21. doi: 10.1128/JCM.00100.
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