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Articles published in
J Clin Microbiol
    June 2026
  1. SINGH BK, Jorwal P, Thakur N, Soneja M, et al
    Xpert MTB/XDR performance in non-sputum samples for diagnosis of drug-resistant tuberculosis at a North Indian tertiary care center.
    J Clin Microbiol. 2026 Jun 12:e0140125. doi: 10.1128/jcm.01401.
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  2. GEFROH SJ, Meier BM, Bowden RR, Evans DR, et al
    Evaluating veterinary Staphylococcus beta-lactam breakpoint performance: a comparative analysis of individual agents versus oxacillin as a surrogate.
    J Clin Microbiol. 2026 Jun 12:e0016826. doi: 10.1128/jcm.00168.
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  3. WEISS ZF, Basu SS
    Point-Counterpoint: The "obsoletogram"-are annual hospital antibiograms still relevant?
    J Clin Microbiol. 2026;64:e0047626.
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  4. LIN D, Wang G, Zhang L, Chang M, et al
    Cytokine and chemokine profiles linked to early severity of scrub typhus: multicenter validation of soluble PD-L1.
    J Clin Microbiol. 2026;64:e0163325.
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    May 2026
  5. BIGOT J, Gibert C, Millet N, Abderrahim W, et al
    Aspergillus serology for chronic pulmonary aspergillosis diagnosis: optimization of an enzyme-linked immunosorbent assay kit and assessment of a Western blot kit performance.
    J Clin Microbiol. 2026 May 28:e0018226. doi: 10.1128/jcm.00182.
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  6. MELETIADIS J, Siopi M, Meinike Jorgensen K, Escribano P, et al
    Multicenter evaluation of low inoculum and a colorimetric assay for antifungal susceptibility testing of Aspergillus fumigatus to echinocandins with the EUCAST E.Def 9.4.
    J Clin Microbiol. 2026 May 22:e0176325. doi: 10.1128/jcm.01763.
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  7. SIOPI M, Leventaki S, Pachoulis I, Rentoumi A, et al
    Evaluation of Sensititre YeastOne for antifungal susceptibility testing of Candida (Candidozyma) auris: misclassification of FKS1 mutants and overestimation of caspofungin resistance in a global collection of isolates.
    J Clin Microbiol. 2026 May 14:e0013026. doi: 10.1128/jcm.00130.
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  8. HOGAN CA, Su LD, Laley J, Carruthers E, et al
    Test performance of a commercial cryptococcal antigen lateral flow assay: a retrospective and prospective study at five Canadian sites.
    J Clin Microbiol. 2026;64:e0143825.
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  9. ILGES D, Dickinson DT, Bosquez JM, Graf EH, et al
    Point-Counterpoint: Should MRSA nares testing be used as a tool for vancomycin de-escalation outside of pneumonia?
    J Clin Microbiol. 2026;64:e0130925.
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  10. HORN EJ, Menefee B, Schotthoefer AM, Dempsey G, et al
    Evaluation of standard and modified two-tiered testing algorithms using well-characterized early Lyme disease samples.
    J Clin Microbiol. 2026;64:e0118725.
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  11. IVERSEN XES, Norman A, Folkvardsen DB, Rasmussen EM, et al
    Seven decades of nontuberculous mycobacteria in Denmark: shifts in species distribution and clinical relevance.
    J Clin Microbiol. 2026;64:e0156125.
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  12. BUI TI, Csiki-Fejer E, Prudhomme S, Bossy L, et al
    A multicenter performance evaluation of aztreonam-avibactam gradient diffusion susceptibility testing for Enterobacterales.
    J Clin Microbiol. 2026;64:e0174925.
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  13. TODD GC, Vaida V, O'Brien B, Chaturvedi S, et al
    The emergence of superficial dermatophytosis due to Trichophyton indotineae and Trichophyton mentagrophytes genotypes VII and II* in New York: a need for comprehensive testing approaches.
    J Clin Microbiol. 2026;64:e0015626.
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  14. BRUKNER I, Oughton M
    The sampling bottleneck in antimicrobial susceptibility testing: consequences and paths forward.
    J Clin Microbiol. 2026;64:e0178825.
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  15. RODRIGUEZ-TEMPORAL D, Gutierrez-Pareja M, Gordy GG, Nahkala EM, et al
    Prediction of KPC-producing Klebsiella pneumoniae by MALDI-TOF MS, ensemble learning, and spectral peak annotation.
    J Clin Microbiol. 2026;64:e0146625.
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    April 2026
  16. MONFORTE A, Martin-Gomez MT, Berastegui C, Marquez-Algaba E, et al
    Diagnostic value of galactomannan in tracheobronchial aspirate for Aspergillus infection in lung transplant recipients (the GALACTBAS study).
    J Clin Microbiol. 2026 Apr 30:e0155625. doi: 10.1128/jcm.01556.
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  17. PUUMALA E, Stevens RW, Wengenack NL
    Recurrent cross-reactivity between Candida tropicalis and Candida parapsilosis on the BIOFIRE FilmArray Blood Culture Identification 2 panel.
    J Clin Microbiol. 2026 Apr 30:e0033526. doi: 10.1128/jcm.00335.
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  18. DRAG MH, Hvilsom C, Poulsen LL, Jensen HE, et al
    MethylSense: high accuracy machine learning-based diagnostics for Aspergillus fumigatus infection in chickens using host cell-free DNA methylation and Nanopore sequencing.
    J Clin Microbiol. 2026 Apr 27:e0105425. doi: 10.1128/jcm.01054.
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  19. STANDL L, Huber T, Bloos F, Thomas-Ruddel D, et al
    Diagnostic performance of beta-(1-->3)-D-glucan, two Candida antigen, and five anti-Candida antibody assays in ICU patients with sepsis and high risk for invasive candidiasis: a secondary endpoint of the CandiSep randomized clinical trial.
    J Clin Microbiol. 2026 Apr 23:e0150025. doi: 10.1128/jcm.01500.
    3)-D-glucan, two Candida antigen, and five anti-Candida antibody assays in ICU patients with sepsis and high risk for invasive candidiasis: a secondary endpoint of the CandiSep randomized clinical trial.&body=STANDL L, Huber T, Bloos F, Thomas-Ruddel D, et al. Diagnostic performance of beta-(1-->3)-D-glucan, two Candida antigen, and five anti-Candida antibody assays in ICU patients with sepsis and high risk for invasive candidiasis: a secondary endpoint of the CandiSep randomized clinical trial. J Clin Microbiol. 2026 Apr 23:e0150025. doi: 10.1128/jcm.01500. https://pubmed.ncbi.nlm.nih.gov/42023876" ALT="Email" TITLE="Email"> --> >> Share

  20. GOLD JAW, Benedict K, Haass KA, Kaur H, et al
    Yeast identification, antifungal susceptibility testing, and Candida auris screening practices at acute care hospitals and long-term acute care hospitals, United States.
    J Clin Microbiol. 2026 Apr 20:e0009126. doi: 10.1128/jcm.00091.
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  21. STAFFORD IA, Ugartemendia Ugalde L, Goetzl LM, Mosqueda A, et al
    Diagnostic potential for IgM antibody detection by the DPP Syphilis TnT assay in neonates at risk for congenital syphilis.
    J Clin Microbiol. 2026 Apr 20:e0190325. doi: 10.1128/jcm.01903.
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  22. TOUATI A, Bercot B, Bebear C, Peuchant O, et al
    Evaluation of the UC-TIB-LGV assay for the genotyping of Chlamydia trachomatis in anorectal samples.
    J Clin Microbiol. 2026 Apr 9:e0006026. doi: 10.1128/jcm.00060.
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  23. NIELSEN MC, Ren P, Kavuri SB, Culbreath K, et al
    High-throughput multiplex detection of respiratory pathogens: multicenter evaluation of the NxTAG Respiratory Pathogen Panel v2 assay.
    J Clin Microbiol. 2026;64:e0174325.
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  24. GREEN AL, Harris AD, Heller A, Vaeth E, et al
    Prevalence of Stenotrophomonas maltophilia colonization among patients receiving mechanical ventilation in long-term care facilities in Maryland, United States.
    J Clin Microbiol. 2026;64:e0162925.
    >> Share

  25. JEFFS MA, Chalmers G, Wong H, Sheth PM, et al
    resaCPE: a rapid, low-cost colorimetric assay for the detection of carbapenemase-producing Enterobacterales.
    J Clin Microbiol. 2026;64:e0100325.
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  26. LANDIVAR SM, Melli LJ, Pichel M, Rivas M, et al
    Serology as an early diagnostic tool in pediatric patients with Shiga toxin-producing Escherichia coli-associated hemolytic uremic syndrome: a post hoc analysis of a phase 2 clinical trial.
    J Clin Microbiol. 2026;64:e0141525.
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  27. HASHIMOTO K, Fukushima K, Matsumoto Y, Saito H, et al
    Comparison of culture and culture-free methods for comprehensive identification of mycobacteria: a single-center prospective study.
    J Clin Microbiol. 2026;64:e0112825.
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  28. GU Y, Ibrahim BA, Gebremariam T, Alkhazraji S, et al
    Rapid and reliable diagnosis of mucormycosis using colorimetric loop-mediated isothermal amplification.
    J Clin Microbiol. 2026;64:e0179025.
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  29. BHUIYAN MTR, Liu J, Juma J, Horne B, et al
    Optimizing Shigella isolation: a multi-site evaluation of laboratory culture methods for Shigella detection, speciation, and serotyping with different transport media and sample types in the Enterics for Global Health study.
    J Clin Microbiol. 2026;64:e0127925.
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  30. GIBBONS S, Klenke C, Roy F, Schulz V, et al
    Development and evaluation of dried urine strip for genital chlamydia and gonorrhea testing.
    J Clin Microbiol. 2026 Apr 2:e0161825. doi: 10.1128/jcm.01618.
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    March 2026
  31. RUDRA P, Parmar H, Daivaa N, Tran C, et al
    A cartridge-based assay for improved detection of multidrug-resistant Mycobacterium tuberculosis directly from sputum.
    J Clin Microbiol. 2026 Mar 30:e0110025. doi: 10.1128/jcm.01100.
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  32. MURPHY SG, Ross T, Fitzgerald A, Gauthier NPG, et al
    Detecting healthcare-associated transmission and antifungal resistance in Candida auris via whole genome sequencing.
    J Clin Microbiol. 2026 Mar 25:e0134825. doi: 10.1128/jcm.01348.
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  33. WANG X, Tian Y, Jin Y, Sui S, et al
    Comparison of ceftobiprole 5 mug disk diffusion, MIC test strip, and broth microdilution for susceptibility testing of Staphylococcus aureus clinical isolates.
    J Clin Microbiol. 2026 Mar 23:e0012526. doi: 10.1128/jcm.00125.
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  34. GODET C, Joste V, Frat J-P, Khalil A, et al
    Non-fumigatus Aspergillus-associated pulmonary events: a diagnostic challenge.
    J Clin Microbiol. 2026 Mar 18:e0016326. doi: 10.1128/jcm.00163.
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  35. KNEGENDORF L, Sommer A, Baier C, Weber RE, et al
    Genomic epidemiology of Enterococcus faecium bloodstream infections during a VanB-type VRE peak reveals an oligoclonal scenario: an observational study at a German university hospital (2017-2022).
    J Clin Microbiol. 2026 Mar 18:e0104425. doi: 10.1128/jcm.01044.
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  36. PATEL K, Shea J, Lapierre P, Halse TA, et al
    Predicting isoniazid resistance in Mycobacterium tuberculosis complex in New York State using whole-genome sequencing.
    J Clin Microbiol. 2026 Mar 18:e0160925. doi: 10.1128/jcm.01609.
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  37. SIMNER PJ
    The shift from "MIC-Only" back to carbapenemase testing among carbapenem-resistant Enterobacterales: what clinical laboratories need to know about updated CLSI guidance.
    J Clin Microbiol. 2026 Mar 18:e0045125. doi: 10.1128/jcm.00451.
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  38. PASQUIER G, Harmand P-O, Le Feur L, Guemas E, et al
    Antifungal susceptibility and molecular characterization of clinical and environmental isolates of Schizophyllum commune.
    J Clin Microbiol. 2026;64:e0144225.
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  39. GHANEM M, Harris A, Timilsina M, Chundru D, et al
    A standardized, genome-guided MLST scheme for Avibacterium paragallinarum: enhanced epidemiological typing and validation against existing methods.
    J Clin Microbiol. 2026;64:e0126725.
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  40. DIRICKS M, Marschall L, Biciusca T, Zielbauer A-S, et al
    Genomic population structure, antimicrobial susceptibility, and clinical features of Mycobacterium xenopi isolates, Frankfurt, Germany, 1995-2020.
    J Clin Microbiol. 2026;64:e0151125.
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  41. DUDOIGNON E, Deniau B, Tsague S, Hamane S, et al
    Characteristics of mycological criteria for the diagnosis of invasive mold infections in patients with severe burn injury.
    J Clin Microbiol. 2026;64:e0095025.
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  42. WILLIAMS GA, Rahou S, Bateman O, Teng AA, et al
    Proteome microarray-guided identification of mycobacterial antigens and ELISA-based peptide mapping for improved serological detection of Mycobacterium bovis infection in European badgers.
    J Clin Microbiol. 2026;64:e0126025.
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  43. DOMOUCHTSIDOU A, Ioannou P, Lianou A, Tsante KA, et al
    Biofilms in clinical infection: pathophysiology, diagnosis, and the evolving therapeutic landscape.
    J Clin Microbiol. 2026;64:e0104225.
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  44. BORGES ALDSB, Aymee L, Lilenbaum W, Di Azevedo MIN, et al
    Revisiting genital leptospirosis in large animals: impacts on reproductive health, diagnostic challenges, and future directions.
    J Clin Microbiol. 2026;64:e0052525.
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  45. TRINH MP, Shin SJ, Shin M-K
    Understanding recurrence in Mycobacterium avium complex pulmonary disease: genotypic strategies to support clinical decision-making.
    J Clin Microbiol. 2026;64:e0108625.
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  46. GORMAN M, Fayne B, Rajeev S
    Diagnosis of leptospirosis in animals: challenges and perspectives.
    J Clin Microbiol. 2026;64:e0170024.
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    February 2026
  47. TAN M, Guo Z, Wang Y, Xu X, et al
    Identification of Aspergillus at section and species levels by artificial intelligence-based microscopic morphology image recognition.
    J Clin Microbiol. 2026 Feb 27:e0001226. doi: 10.1128/jcm.00012.
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  48. YANG Z, Ma Z, Liu Z, Li P, et al
    Accuracy of nanopore-based targeted next-generation sequencing assay for detection of Mycobacterium tuberculosis and drug resistance from non-sputum specimens: a multicenter prospective study in China.
    J Clin Microbiol. 2026 Feb 24:e0143325. doi: 10.1128/jcm.01433.
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  49. HENIN N, Silvant A, Gardette M, Balcon C, et al
    Clinical performance of two commercial PCR assays for the detection of macrolide resistance in Mycoplasma pneumoniae.
    J Clin Microbiol. 2026 Feb 13:e0149125. doi: 10.1128/jcm.01491.
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  50. REYES CURCIO F, McCallum J, Borrelli G, Orr B, et al
    The Brief Case: Adjudication of discrepant genotypic and phenotypic antimicrobial susceptibility testing results in a patient with Staphylococcus aureus bacteremia.
    J Clin Microbiol. 2026;64:e0080925.
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  51. BEN-CHETRIT E, Helviz Y, Levin PD
    Diagnostic value of blood culture growth patterns in distinguishing contaminants from pathogens.
    J Clin Microbiol. 2026;64:e0121025.
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  52. SHIER KL, Gonzales G, Perez DAG, Bao JR, et al
    Performance of the Vitek 2, Sensititre, and Etest antimicrobial susceptibility testing systems for isolates of Burkholderia cepacia complex.
    J Clin Microbiol. 2026;64:e0048425.
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  53. BISSONNETTE N, Ollier S, Brousseau J-P, Byrne AS, et al
    Systematic evaluation and optimization of TaqMan qPCR assays targeting F57, ISMAP02, and IS900 for multiplex detection of Mycobacterium avium subsp. paratuberculosis.
    J Clin Microbiol. 2026;64:e0087225.
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  54. YAGUPSKY P
    It is time to have a molecular test for diagnosing Kingella kingae infections in the lab!
    J Clin Microbiol. 2026;64:e0153225.
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  55. MAH JK, Lieu A, Banaei N
    Non-invasive diagnosis of invasive fungal disease with cell-free DNA PCR.
    J Clin Microbiol. 2026;64:e0123624.
    >> Share

  56. KOCHAN M, Russell V, Adam HJ, Karlowsky JA, et al
    False-positive Bioline TB Ag MPT64 result from MGIT bottles inoculated with Staphylococcus aureus.
    J Clin Microbiol. 2026 Feb 10:e0171125. doi: 10.1128/jcm.01711.
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  57. KALINICH CC, Gonzalez FL, Osmaston A, Breban MI, et al
    A tiled amplicon protocol for culture-free whole-genome sequencing of M. tuberculosis from clinical specimens.
    J Clin Microbiol. 2026 Feb 9:e0182325. doi: 10.1128/jcm.01823.
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    January 2026
  58. TIAN Y, He X, Wu X, Liu Y, et al
    Performance of gradient diffusion strip and disk diffusion versus broth microdilution for lefamulin susceptibility testing of 422 Staphylococcus aureus isolates.
    J Clin Microbiol. 2026 Jan 23:e0157825. doi: 10.1128/jcm.01578.
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  59. SIMMONS-WILLIAMS C, Soares L, Becker D, Lima A, et al
    Comparison of the VITEK REVEAL AST and Accelerate Pheno systems for fast antimicrobial susceptibility testing of gram-negative blood cultures at a large academic health system.
    J Clin Microbiol. 2026;64:e0107325.
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  60. LIN Y-T, Lin H-H, Chen C-H, Tseng K-H, et al
    Interpretive agreement of susceptibility between broth microdilution and disk diffusion methods for cefiderocol, using criteria from the Clinical and Laboratory Standards Institute, European Committee on Antimicrobial Susceptibility Testing, and the F
    J Clin Microbiol. 2026;64:e0125525.
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  61. HAAS PD, Kabugo J, Namutebi J, Tiemersma E, et al
    Evaluation of the Simple One-Step (SOS) stool method for Truenat MTB plus and Xpert MTB/XDR assay.
    J Clin Microbiol. 2026;64:e0104025.
    >> Share

  62. HOFFMANN H, Golubov A, Corbett C, Allamuratova D, et al
    Tuberculosis diagnosis and the complete drug resistance pattern from a single sample within a single day by use of a composite platform of MAX MDR-TB and AmPORE-TB.
    J Clin Microbiol. 2026 Jan 12:e0138825. doi: 10.1128/jcm.01388.
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    December 2025
  63. JI HJ, Jang A-Y, Han SH, Kim M-K, et al
    Accurate serotype identification of Streptococcus pneumoniae using nanopore Cas9-targeted serotype identification (nCATSerotyping).
    J Clin Microbiol. 2025 Dec 30:e0098425. doi: 10.1128/jcm.00984.
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  64. ZHANG SX, de Hoog S, Denning DW, Ahmed SA, et al
    Reaffirming the importance of nomenclature stability for Candida auris and its associated disease of candidiasis.
    J Clin Microbiol. 2025 Dec 23:e0155025. doi: 10.1128/jcm.01550.
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  65. ZHANG Y, Huo C, Zhang T, Liu Q, et al
    A novel Pyrococcus furiosus argonaute-based method for rapid and sensitive detection of Mycoplasma pneumoniae and a macrolide-resistance-related mutation.
    J Clin Microbiol. 2025 Dec 18:e0108925. doi: 10.1128/jcm.01089.
    >> Share

  66. GEFROH S, Meier B, Maddock K
    Veterinary method evaluation of Vitek-2 compact for antimicrobial susceptibility testing of Staphylococcus spp. and Enterococcus spp.
    J Clin Microbiol. 2025 Dec 17:e0096125. doi: 10.1128/jcm.00961.
    >> Share

  67. MCTAGGART LR, Scione A, Hillier K, Brown E, et al
    Toxigenic diphtheria rarely detected amid rising cases of nontoxigenic Corynebacterium diphtheriae infections in Ontario, Canada, 2011-2023.
    J Clin Microbiol. 2025;63:e0145225.
    >> Share

  68. RICKERTS V, Springer J, Gerkrath J, Korczynski D, et al
    Molecular diagnostics in cancer patients with suspected respiratory mold infections.
    J Clin Microbiol. 2025;63:e0120125.
    >> Share

  69. NEUPANE P, Maggi RG, Basnet M, Marconi RT, et al
    Development and validation of enzyme-linked immunosorbent assays for the serodiagnosis of canine bartonelloses.
    J Clin Microbiol. 2025;63:e0026725.
    >> Share

  70. DEMIR KK, Anderson G, Budvytiene I, Banaei N, et al
    Accuracy and actionability of mold PCR on bronchoalveolar lavage fluid for diagnosis of invasive mold disease.
    J Clin Microbiol. 2025;63:e0114525.
    >> Share

  71. BUI TI, Brown AP, Muenks CE, Dumm RE, et al
    Comparison of VITEK REVEAL fast antimicrobial susceptibility testing to antibiotic disk diffusion for gram-negative bloodstream infections.
    J Clin Microbiol. 2025;63:e0092725.
    >> Share

  72. YAKUBU RR, Merwede J, Viglione B, Patel V, et al
    Evaluation of the Hologic Panther Fusion investigational use only assays for gastrointestinal bacterial pathogens.
    J Clin Microbiol. 2025;63:e0073025.
    >> Share

  73. GONZALEZ K, Dien Bard J, Becker D, Bernier B, et al
    Multicenter clinical performance and comparative evaluation of the LIAISON PLEX Respiratory Flex Assay for syndromic detection of viral and bacterial pathogens in nasopharyngeal swabs.
    J Clin Microbiol. 2025;63:e0070825.
    >> Share

  74. VAN DER POL B, Arcenas R, Boraas C, Chavoustie S, et al
    Sensitivity and specificity of the Cobas Liat CT/NG/MG nucleic acid test in a clinical laboratory setting and point-of-care location.
    J Clin Microbiol. 2025;63:e0070625.
    >> Share

  75. LEE E, Jung WS, Lim CS, Jang WS, et al
    Development of a LAMP assay using hybridization-based TaqMan-style probes (HyTaq) for simultaneous detection of wild-type and macrolide-resistant Mycoplasma pneumoniae.
    J Clin Microbiol. 2025 Dec 17:e0129125. doi: 10.1128/jcm.01291.
    >> Share

  76. FENG Z, Ge S, Miao P, Liu M, et al
    Diagnostic performance of the Sanity 2.0 assay to detect resistance to rifampicin, isoniazid, and fluoroquinolones in tuberculosis.
    J Clin Microbiol. 2025 Dec 10:e0129925. doi: 10.1128/jcm.01299.
    >> Share

  77. OLABAMIJI JO, Ochei K, Daniel O, Eneogu R, et al
    Evaluation of stool-based testing to diagnose tuberculosis in children using the Truenat platform in routine settings in Nigeria.
    J Clin Microbiol. 2025 Dec 10:e0104125. doi: 10.1128/jcm.01041.
    >> Share

  78. LI Y, Lin W, Li Z, Tran T, et al
    Whole-genome sequencing-based pathogen characterization for streptococcal infection directly from positive blood culture samples.
    J Clin Microbiol. 2025 Dec 8:e0112625. doi: 10.1128/jcm.01126.
    >> Share

    November 2025
  79. FOUCHET T, Nait Chabane M, Allam C, Awad Z, et al
    Clinical evaluation of the diagnostic performances and treatment monitoring of the new PATHFAST TB LAM Ag assay in sputum specimens of patients with tuberculosis or with nontuberculous mycobacteria pulmonary disease.
    J Clin Microbiol. 2025 Nov 26:e0126925. doi: 10.1128/jcm.01269.
    >> Share

  80. AYALA JC, Hutton SM, Cartee JC, Reimche JL, et al
    A novel commensal Neisseria species harboring the gonococcal diagnostic marker DR-9 causes false-positive Roche cobas NAAT results.
    J Clin Microbiol. 2025 Nov 19:e0102225. doi: 10.1128/jcm.01022.
    >> Share

  81. XU Z, Huang Z, Yuan L, Wu H, et al
    Genomic surveillance reveals global spread of macrolide-resistant Bordetella pertussis linked to vaccine changes.
    J Clin Microbiol. 2025 Nov 14:e0106425. doi: 10.1128/jcm.01064.
    >> Share

  82. XU T, Zheng Y, Xue R, Li R, et al
    Retrospective analysis of non-tuberculous mycobacterial skin infections: diagnostic accuracy, treatment efficacy, and PCR-based species detection in a Chinese primary care hospital.
    J Clin Microbiol. 2025 Nov 13:e0106525. doi: 10.1128/jcm.01065.
    >> Share

  83. SABHARWAL L, Purpora A, Gerstbrein D, Konrad K, et al
    Performance evaluation of the QIAstat-Dx gastrointestinal panel 2 for the detection of Clostridioides difficile against multiple commercial assays.
    J Clin Microbiol. 2025;63:e0057625.
    >> Share

  84. SQUITIERI D, Menchinelli G, Magri C, D'Inzeo T, et al
    Improving time-to-result: head-to-head comparison of three rapid AST systems for Gram-negative bacteremia, including the newly developed VITEK REVEAL.
    J Clin Microbiol. 2025;63:e0105025.
    >> Share

  85. OYENIRAN SJ, Leber AL, Wang H
    An in-house Kingella kingae PCR in a large pediatric cohort: impact on diagnosis, antimicrobial stewardship, and clinical outcomes.
    J Clin Microbiol. 2025;63:e0098625.
    >> Share

  86. HICKMAN AF, Weber AF, Horn EJ, Gwynne PJ, et al
    The multiplexed single-tier InBios Lyme Detect Multiplex ELISA is more sensitive than standard two-tier tests in the early stages of Lyme disease.
    J Clin Microbiol. 2025;63:e0062925.
    >> Share

  87. SERNA C, Pulido-Vadillo M, Matamoros BR, Favieres JF, et al
    Persistent multispecies dissemination of armA-carrying IncR plasmids among clinical and environmental bacterial populations in a Spanish veterinary hospital.
    J Clin Microbiol. 2025;63:e0067325.
    >> Share

  88. SCHOTTHOEFER AM
    The potential to improve Lyme disease diagnostics through quantification of immunoglobulin class switching patterns.
    J Clin Microbiol. 2025;63:e0102025.
    >> Share

  89. CAO Y, Wang J, Fan Z, Xu L, et al
    An extraction-free, lyophilized one-pot RAA-CRISPR assay for point-of-care testing of Haemophilus influenzae.
    J Clin Microbiol. 2025;63:e0053525.
    >> Share

  90. RATTIN J, Boswell M, Rhoads D
    Emerging technologies for rapid phenotypic antimicrobial susceptibility testing of clinical isolates of bacteria.
    J Clin Microbiol. 2025;63:e0067425.
    >> Share

  91. BORMAN AM, Abdolrasouli A, Johnson EM
    Name changes for fungi of medical importance, 2022-2024.
    J Clin Microbiol. 2025;63:e0204124.
    >> Share

    October 2025
  92. LI K, Lacouture S, Weinert LA, Sekizaki T, et al
    Genomic re-evaluation of clinical isolates reveals a structured Streptococcus suis complex.
    J Clin Microbiol. 2025 Oct 31:e0103025. doi: 10.1128/jcm.01030.
    >> Share

  93. FOLKESSON E, Foroogh F, Kleberg L, Kjellgren V, et al
    A multiplex Mtb-specific FluoroSpot assay measuring IFNgamma, IL-2, and TNF-secreting cells can improve accuracy and differentiation across the tuberculosis spectrum.
    J Clin Microbiol. 2025 Oct 29:e0089425. doi: 10.1128/jcm.00894.
    >> Share

  94. ZHANG X, Yi X, Luo W, Wang J, et al
    Developing genome typing strategies for the emerging zoonotic pathogen Streptococcus parasuis.
    J Clin Microbiol. 2025 Oct 21:e0074125. doi: 10.1128/jcm.00741.
    >> Share

  95. MARXREITER S, Marino J, Callan K, Hargrave J, et al
    Rapid detection of gram-negative antimicrobial resistance determinants directly from positive blood culture broths using a multiplex PCR system.
    J Clin Microbiol. 2025 Oct 21:e0038425. doi: 10.1128/jcm.00384.
    >> Share

  96. BATAC ALR, Marks M, Tucker JD, Peeling RW, et al
    Syphilis self-testing and implications for syphilis control and prevention.
    J Clin Microbiol. 2025 Oct 21:e0098225. doi: 10.1128/jcm.00982.
    >> Share

  97. MOLENDIJK MM, Verkaik NJ, de Vogel CP, Lemmens-den Toom N, et al
    In vitro activity of antibiotic monotherapy and combination therapy with bacteriophages against Staphylococcus aureus LVAD-driveline infections.
    J Clin Microbiol. 2025 Oct 9:e0027225. doi: 10.1128/jcm.00272.
    >> Share

  98. BUEHNE KL, Lajos L, Lopansri B, Tate A, et al
    The Brief Case: How antibiotic pretreatment complicated the diagnosis of Haemophilus influenzae type a meningitis.
    J Clin Microbiol. 2025;63:e0054025.
    >> Share

  99. BAYLESS DR, Dumais MG, McHugh JW, Ranganath N, et al
    Clinical and microbiologic features of Achromobacter species: a 10-year, multicenter experience.
    J Clin Microbiol. 2025;63:e0072425.
    >> Share

  100. YUKAWA K, Harada S, Komori K, Hayama B, et al
    Corynebacterium striatum infections in oncologic patients: clinical spectrum, resistance profiles, and evidence of nosocomial transmission.
    J Clin Microbiol. 2025;63:e0082925.
    >> Share

  101. KIENINGER B, Wagner GE, Rath A, Eichner A, et al
    Development and validation of a core genome multilocus sequence typing scheme for Citrobacter freundii: application in outbreak investigations and comparative analysis across the Citrobacter genus.
    J Clin Microbiol. 2025;63:e0086025.
    >> Share

  102. EICKHOFF MJ, Brown AP, Muenks CE, Porter ML, et al
    Evaluation of expert rules for carbapenemase class identification in Enterobacterales isolates using the VITEK2 susceptibility testing platform.
    J Clin Microbiol. 2025;63:e0076925.
    >> Share

  103. ARMSTRONG DT, Baird ECE, Pretty L, D'Agostino K, et al
    Diagnostics and new treatment regimens for TB: can the Xpert MTB/XDR assay fill the gap for fluoroquinolone testing?
    J Clin Microbiol. 2025;63:e0064325.
    >> Share

  104. MIDDLETON S, Singh M, Coad M, Palmer S, et al
    Optimization of a molecularly defined tuberculin formulation: recombinant fusion proteins and epitope surgery.
    J Clin Microbiol. 2025;63:e0055225.
    >> Share

  105. FIGUEIREDO-PEREIRA C, Fleming P, Alganes MN, Bi R, et al
    Analytical evaluation of TriVerity, a rapid diagnostic and prognostic host gene expression test performed on the Myrna instrument using RT-LAMP.
    J Clin Microbiol. 2025;63:e0035225.
    >> Share

  106. GLASGOW HL, Zheng Y, Brazelton JN, Tang L, et al
    Comparison of core genome multi-locus sequencing typing pipelines for hospital outbreak detection of common bacterial pathogens.
    J Clin Microbiol. 2025;63:e0064625.
    >> Share

  107. BROWN DG, Surette M, Ray S, Guo K, et al
    Paradoxical carbapenemase activity detected by modified carbapenemase inactivation (mCIM) method in Citrobacter sedlakii.
    J Clin Microbiol. 2025;63:e0058925.
    >> Share

  108. BOGAERTS B, Maex M, Commans F, Goeders N, et al
    Oxford Nanopore Technologies R10 sequencing enables accurate cgMLST-based bacterial outbreak investigation of Neisseria meningitidis and Salmonella enterica when accounting for methylation-related errors.
    J Clin Microbiol. 2025;63:e0041025.
    >> Share

  109. MITCHELL BI, Markantonis JE
    An underestimated pathogen: Corynebacterium species.
    J Clin Microbiol. 2025;63:e0155224.
    >> Share

    September 2025
  110. BRANDAO AP, Ferreira FMdA, Simeao FCdS, Ferrazoli L, et al
    Off-label evaluation of the BD MAX MDR-TB assay for rapid diagnosis of rifampicin and isoniazid resistance of Mycobacterium tuberculosis clinical isolates in a high-volume reference laboratory.
    J Clin Microbiol. 2025 Sep 23:e0091225. doi: 10.1128/jcm.00912.
    >> Share

  111. ZHAO C, Li G, Shen C, Xie Y, et al
    An extraction-free and one-pot two-temperature CRISPR/Cas12b system for visual detection of Group B Streptococcus by integrating with PRA.
    J Clin Microbiol. 2025 Sep 19:e0081925. doi: 10.1128/jcm.00819.
    >> Share

  112. CHEN Y, Tang H, Zheng J, Yang Q, et al
    Transforming tuberculosis diagnosis with clinical metagenomics: progress and roadblocks.
    J Clin Microbiol. 2025 Sep 19:e0053725. doi: 10.1128/jcm.00537.
    >> Share

  113. LEVIN AE, Wormser GP, Horn EJ, Karaseva N, et al
    A novel single-tier serologic test to diagnose all stages of Lyme disease.
    J Clin Microbiol. 2025;63:e0048325.
    >> Share

  114. CSIKI-FEJER E, Traczewski M, Procop GW, Davis TE, et al
    Performance evaluation of plazomicin susceptibility testing of Enterobacterales on VITEK 2 and VITEK 2 Compact Systems.
    J Clin Microbiol. 2025;63:e0044925.
    >> Share

  115. FISCHER-WELLENBORN M, Imkamp F, Pereira Pires V, Zbinden R, et al
    Antibiotic resistance profiles of seven genomospecies of Corynebacterium jeikeium analyzed by whole genome sequencing.
    J Clin Microbiol. 2025 Sep 3:e0041825. doi: 10.1128/jcm.00418.
    >> Share

    August 2025
  116. RISCH P, Broger T, Booi Z, Tiseo K, et al
    AveloMask, a novel breath aerosol collection kit for airborne Mycobacterium tuberculosis: a proof-of-principle assessment.
    J Clin Microbiol. 2025 Aug 21:e0054625. doi: 10.1128/jcm.00546.
    >> Share

  117. RAJAGOPALAN S, Das L, Kohlerschmidt DJ, Rourke AK, et al
    Luciferase reporter mycobacteriophage (TM4::GeNL) enables rapid assessment of drug susceptibilities and inducible macrolide resistance in Mycobacterium abscessus complex.
    J Clin Microbiol. 2025 Aug 20:e0084125. doi: 10.1128/jcm.00841.
    >> Share

  118. MAO Y, Lv R, Shao H, Zhao Y, et al
    An ELISA-like sensitive and visual detection system targeting Yersinia pestis based on CRISPR/Cas12a and DNAzyme.
    J Clin Microbiol. 2025;63:e0027425.
    >> Share

  119. YU Z, Wang R
    Genomic-enabled classification of three Mycobacteroides abscessus subspecies and an effective subspecies-specific identification method.
    J Clin Microbiol. 2025;63:e0069725.
    >> Share

  120. VEREECKE N, Yoon TB, Luo TL, Corey BW, et al
    An open-source nanopore-only sequencing workflow for analysis of clonal outbreaks delivers short-read level accuracy.
    J Clin Microbiol. 2025;63:e0066425.
    >> Share

  121. BHATTACHARJEE P, Hegde ST, Khan AI, Nabil IK, et al
    Rapid tests as a practical alternative to slide agglutination for the confirmation of V. cholerae O1.
    J Clin Microbiol. 2025;63:e0043325.
    >> Share

  122. NAIR N, Marques A, Horn EJ, Brown G, et al
    Class and isotype of VlsE-specific antibody differentiates Lyme disease stage.
    J Clin Microbiol. 2025;63:e0034725.
    >> Share

  123. SANCHEZ A, Rauch M, Buechner S, Jung-Hynes B, et al
    Percentage of culture confirmation and melting curve analysis reveals false-positive Campylobacter detection in a molecular syndromic panel.
    J Clin Microbiol. 2025;63:e0002825.
    >> Share

  124. MAH J, Lieu A, Nicholas V, Moreno A, et al
    Accuracy of plasma cell-free DNA PCR for non-invasive diagnosis of mucormycosis.
    J Clin Microbiol. 2025;63:e0079625.
    >> Share

  125. KITAGAWA D, Nishihara S, Murata M, Onishi M, et al
    PCR sensitivity for Mycoplasma pneumoniae detection in nasopharyngeal and oropharyngeal swabs: a comparative study.
    J Clin Microbiol. 2025;63:e0045825.
    >> Share

  126. BOSSERMAN RE, Tarlton NJ, Alvarado K, Roemmich B, et al
    Performance and workflow comparison of the VITEK MS PRIME and Bruker Biotyper MALDI-TOF MS systems.
    J Clin Microbiol. 2025;63:e0021125.
    >> Share

  127. SREDNIK ME, Shelkamy MMS, Hashish A, R De Macedo N, et al
    Development of selective culture media for efficient isolation of Avibacterium paragallinarum from chickens.
    J Clin Microbiol. 2025;63:e0031125.
    >> Share

  128. RHOADS DD, Hanson ND, Reedy K, Gafsi J, et al
    First description of the performance of the VITEK MITUBE device used with MALDI-TOF mass spectrometry to achieve identification of gram-negative bacteria directly from positive blood culture broth.
    J Clin Microbiol. 2025;63:e0012225.
    >> Share

  129. CLARK K, Joyee AG, Biddison D, Rabine S, et al
    Clinical development and performance of the First to Know Syphilis Self-Test for over-the-counter usage: a de novo rapid test for treponemal antibody.
    J Clin Microbiol. 2025 Aug 5:e0024425. doi: 10.1128/jcm.00244.
    >> Share

    July 2025
  130. HARADA S, Komori K, Yukawa K, Hayama B, et al
    Genomic epidemiology and antimicrobial resistance of Corynebacterium macclintockiae, the predominant species of human pathogens within the Corynebacterium jeikeium complex.
    J Clin Microbiol. 2025 Jul 24:e0050025. doi: 10.1128/jcm.00500.
    >> Share

  131. ROUSSELOT J, Millon L, Scherer E, Bourgeois N, et al
    Detection of Mucorales antigen in bronchoalveolar lavage samples using a newly developed lateral-flow device.
    J Clin Microbiol. 2025;63:e0022625.
    >> Share

  132. REN J, Xia J, Zhang M, Liu C, et al
    Automated identification of Salmonella serotype using MALDI-TOF mass spectrometry and machine learning techniques.
    J Clin Microbiol. 2025;63:e0003725.
    >> Share

  133. EMERY CL, Dhiman N, Chow S-K, Peterson G, et al
    Performance of the LIAISON PLEX yeast blood culture assay for identifying 16 invasive fungal pathogens in blood cultures.
    J Clin Microbiol. 2025;63:e0036225.
    >> Share

  134. SIOPI M, Leventaki S, Pachoulis I, Spruijtenburg B, et al
    Evaluation of the MIC test strips for antifungal susceptibility testing of Candidozyma auris (Candida auris) using a representative international collection of isolates.
    J Clin Microbiol. 2025 Jul 3:e0039925. doi: 10.1128/jcm.00399.
    >> Share

  135. CALDERA JR, Dayo A, Wiederhold N, Yang S, et al
    Development and validation of next-generation sequencing-based clinical test for triazole resistance prediction in Aspergillus fumigatus.
    J Clin Microbiol. 2025 Jul 1:e0029125. doi: 10.1128/jcm.00291.
    >> Share

  136. GHEBREKRISTOS Y, Auma E, Mahlobo Z, Venter R, et al
    Waste to worth: diagnostic accuracy of Xpert MTB/XDR on contaminated liquid cultures to salvage the detection of drug-resistant tuberculosis.
    J Clin Microbiol. 2025 Jul 1:e0058025. doi: 10.1128/jcm.00580.
    >> Share

    June 2025
  137. MENDES RE, Pierce JV, Wright K, Huband MD, et al
    Re-evaluation of penicillin and ceftriaxone MIC results to predict susceptibility to the oral cephalosporin, cefpodoxime, in Streptococcus pneumoniae clinical isolates from the United States according to CLSI guidelines (2019-2021).
    J Clin Microbiol. 2025 Jun 24:e0002725. doi: 10.1128/jcm.00027.
    >> Share

  138. KRUEGER T, Kadonsky G, Thelen E, Zapp A, et al
    Advanced specificity and sensitivity studies relative to a research use only transcription-mediated amplification-based assay for Treponema pallidum RNA detection.
    J Clin Microbiol. 2025 Jun 20:e0038825. doi: 10.1128/jcm.00388.
    >> Share

  139. MARBANIANG YV, Leto D, Almohri H, Hasan MR, et al
    Treatment and diagnostic challenges associated with the novel and rapidly emerging antifungal-resistant dermatophyte, Trichophyton indotineae.
    J Clin Microbiol. 2025;63:e0140724.
    >> Share

  140. MAYNARD R, Manuel C, Simpkins S, Haro M, et al
    Development of disk diffusion susceptibility test methods for Aerococcus spp. and updates to Clinical and Laboratory Standards Institute MIC breakpoints.
    J Clin Microbiol. 2025;63:e0011525.
    >> Share

  141. ZHAO C, Zhu J, Xiao Y, Li F, et al
    REL/DPA/AVI method: a novel approach for rapid detection of carbapenemase-producing Enterobacterales directly from positive blood cultures based on optical density.
    J Clin Microbiol. 2025;63:e0196024.
    >> Share

  142. LO S-H, Tseng Y-T, Chen Y-C, Ho M-W, et al
    In vitro activity of isavuconazole, ravuconazole, and comparison of the Sensititre YeastOne and CLSI broth microdilution methods against clinical isolates of Trichosporon species.
    J Clin Microbiol. 2025;63:e0031925.
    >> Share

  143. CAMPOS-MADUENO EI, Peirano G, Aldeia C, Elzi MV, et al
    Detection of ESBL-producing Klebsiella oxytoca complex with VITEK 2 system and screening cutoffs for implementing confirmatory tests.
    J Clin Microbiol. 2025;63:e0012825.
    >> Share

  144. DUTTA S, Jacobs MR, Good CE, Abdelhamed AM, et al
    Multicenter evaluation of the eQUANT system for use with disk diffusion AST of gram-negative bacteria directly from positive blood cultures.
    J Clin Microbiol. 2025;63:e0160624.
    >> Share

  145. HARRIS H, Stambaugh H, Jacobs E, Bhalodi A, et al
    Defining antimicrobial susceptibility testing methods and breakpoints among Achromobacter species.
    J Clin Microbiol. 2025;63:e0026425.
    >> Share

  146. TANG HM, Chen SC-A, Basile K, Halliday CL, et al
    Development and evaluation of a Pan-Mucorales Real-time PCR and a multiplex Real-time PCR for detection and identification of Rhizopus arrhizus, Rhizopus microsporus, and Mucor spp. in clinical specimens.
    J Clin Microbiol. 2025;63:e0193724.
    >> Share

  147. RICHTER SS, Dominguez EL, Hupp AA, Griffis M, et al
    Evaluation of MicroScan and VITEK 2 systems for susceptibility testing of Enterobacterales with updated breakpoints.
    J Clin Microbiol. 2025;63:e0004825.
    >> Share

  148. YAN A, Kus JV, Sant N
    The Staphylococcus aureus complex: implications for the clinical microbiology laboratory.
    J Clin Microbiol. 2025 Jun 4:e0127624. doi: 10.1128/jcm.01276.
    >> Share

  149. TU C, Su B, Xiong Y, Xia Z, et al
    Identification and quantification of gyrA variants in fluoroquinolone-resistant Mycobacterium tuberculosis in a MeltArray reaction.
    J Clin Microbiol. 2025 Jun 3:e0014625. doi: 10.1128/jcm.00146.
    >> Share

    May 2025
  150. DUTKIEWICZ M, Garros M, Bui J, Charlier V, et al
    Comparison of MALDI-TOF MS instruments and databases for the identification of uncommon yeasts, Aspergillus spp. and rare filamentous fungi.
    J Clin Microbiol. 2025 May 15:e0161224. doi: 10.1128/jcm.01612.
    >> Share

  151. SERGE DIAGBOUGA P, Djibougou AD, Pease C, Alcaide A, et al
    Preliminary performance of the VIDAS TB-IGRA as an aid in the diagnosis of individuals infected with Mycobacterium tuberculosis.
    J Clin Microbiol. 2025 May 14:e0164124. doi: 10.1128/jcm.01641.
    >> Share

  152. KILDEMOES AMO, Rai OSS, Westermann EPL, Johansen HFB, et al
    Detection of human IgG antibodies against Mycoplasma genitalium using a recombinant MG075 antigen.
    J Clin Microbiol. 2025;63:e0187624.
    >> Share

  153. GUERIN F, Sassi M, Gravey F, Zouari A, et al
    Lactobacillus delbrueckii subsp. allosunkii and lactis as emerging human uropathogens in elderly patients.
    J Clin Microbiol. 2025;63:e0207224.
    >> Share

  154. SIDDALL RL, Starkey JC, Patel R
    Automated whole genome sequencing platform for bacterial strain typing in clinical microbiology laboratories.
    J Clin Microbiol. 2025;63:e0017825.
    >> Share

  155. CAMPODONICO VL, Ruelle J, Fitzgerald A, Bergman Y, et al
    Evaluation of long-read 16S rRNA next-generation sequencing for identification of bacterial isolates in a clinical diagnostic laboratory.
    J Clin Microbiol. 2025;63:e0167024.
    >> Share

  156. CIMEN C, Siemer P, Sattler J, Voss A, et al
    Performance of disk diffusion, gradient test, and VITEK 2 for carbapenem susceptibility testing in OXA-48-like carbapenemase-producing Enterobacterales: a comparative study.
    J Clin Microbiol. 2025;63:e0189324.
    >> Share

  157. MILLEVILLE S, Rouabah L, Bernabeu S, Santerre Henriksen A, et al
    Performance of disc diffusion and four commercially available MIC tests to determine mecillinam susceptibility on carbapenemase-producing Enterobacterales.
    J Clin Microbiol. 2025;63:e0147324.
    >> Share

  158. MAO S, Yang X, Wang Y, Chen F, et al
    Ultrasensitive and highly specific detection of the Brucella genus and B. melitensis by CRISPR/Cas12b-multiple cross displacement amplification technique.
    J Clin Microbiol. 2025;63:e0153224.
    >> Share

  159. CANIFF KE, Al Musawa M, Judd C, Shupp M, et al
    Evaluating antimicrobial stewardship strategies in candidemia: a novel desirability of outcome ranking (DOOR) analysis comparing blood culture versus T2Candida diagnostic approaches.
    J Clin Microbiol. 2025;63:e0004325.
    >> Share

  160. SMITH DJ, Melhem MSC, Dirven J, de Azevedo CMPeS, et al
    Establishment of epidemiological cutoff values for Fonsecaea pedrosoi, the primary etiologic agent of chromoblastomycosis, and eight antifungal medications.
    J Clin Microbiol. 2025;63:e0190324.
    >> Share

  161. LI J, Dendukuri N, Longtin Y, Banz A, et al
    Determination of the performance of a novel diagnostic test for Clostridioides difficile toxins A and B using latent class analysis.
    J Clin Microbiol. 2025;63:e0180724.
    >> Share

  162. STREVA V, Gajewski J, Pento J, Chandrasekaran A, et al
    Multi-center evaluation of the Selux next-generation phenotyping system for gram-negative direct-from-positive blood culture antimicrobial susceptibility testing.
    J Clin Microbiol. 2025;63:e0181924.
    >> Share

  163. CANDELA A, Fernandez-Billon M, Aja-Macaya P, Gonzalez-Pinto L, et al
    Rapid prediction of carbapenemases in Pseudomonas aeruginosa by imipenem/relebactam and MALDI-TOF MS.
    J Clin Microbiol. 2025;63:e0110524.
    >> Share

  164. SOBKOWIAK A, Schwierzeck V, van Almsick V, Scherff N, et al
    The dark matter of bacterial genomic surveillance-antimicrobial resistance plasmid transmissions in the hospital setting.
    J Clin Microbiol. 2025 May 12:e0012125. doi: 10.1128/jcm.00121.
    >> Share

  165. WILLIAMS E, Karapanagiotidis T, Nicholson S, Toma H, et al
    Alternative treponemal serology assays for diagnosis and confirmation of syphilis in a diagnostic laboratory: a retrospective evaluation of four agglutination assays and one ELISA.
    J Clin Microbiol. 2025 May 9:e0176824. doi: 10.1128/jcm.01768.
    >> Share

    April 2025
  166. JIN Q-Y, Torres RC, Yang C, He LH, et al
    Population structure of Helicobacter pylori and antibiotic resistance-associated variants in a high-risk area of gastric cancer.
    J Clin Microbiol. 2025 Apr 11:e0003325. doi: 10.1128/jcm.00033.
    >> Share

  167. DIERCKX L, Rodriguez-Ruiz JP, Ekinci E, van Heirstraeten L, et al
    Pneumococcal genotype 23B1 as a driver of increased 23B serotype carriage, penicillin non-susceptibility, and invasive disease in Belgium: a retrospective analysis.
    J Clin Microbiol. 2025;63:e0169624.
    >> Share

  168. TURBAWATY DK, Maulida SN, Anadhea DR, Ritonga MA, et al
    Standard E TB-Feron ELISA and Standard F TB-Feron FIA positivity rates and agreement with QuantiFERON-TB Gold Plus among TB high-risk population in Bandung, Indonesia.
    J Clin Microbiol. 2025;63:e0148624.
    >> Share

  169. CZECH MM, Cuellar-Rodriguez J, Kwon-Chung KJ, Stock F, et al
    Clinical significance and antifungal susceptibility profile of 103 clinical isolates of Scedosporium species complex and Lomentospora prolificans obtained from NIH patients.
    J Clin Microbiol. 2025;63:e0155024.
    >> Share

  170. BIZOT E, Bonacorsi S, Labe P, Pinhas Y, et al
    Use of gastrointestinal syndromic multiplex molecular assays and detection of Escherichia coli pathotypes in pediatric wards.
    J Clin Microbiol. 2025;63:e0107324.
    >> Share

    March 2025
  171. GLASSMAN H, Ahmed-Bentley J, Buckman R, Carbungco M, et al
    Impact of packed red blood cells versus fresh whole human blood on the growth of nutritionally variant streptococci and Streptococcus anginosus group during verification of the BACT/ALERT VIRTUO blood culture system.
    J Clin Microbiol. 2025 Mar 31:e0198724. doi: 10.1128/jcm.01987.
    >> Share

  172. EIGNER U, Koffer J, Betz U, Koglin J, et al
    Evaluation of the cobas MTB and MTB-RIF/INH assay in clinical samples for the detection of Mycobacterium tuberculosis in respiratory specimens.
    J Clin Microbiol. 2025 Mar 25:e0195924. doi: 10.1128/jcm.01959.
    >> Share

  173. LAMBERINK H, Huygens S, Aerts R, Lagrou K, et al
    Correction for Lamberink et al., "Multicenter validation of a galactomannan chemiluminescence immunoassay for the diagnosis of pulmonary aspergillosis on serum of patients with hematological disease".
    J Clin Microbiol. 2025 Mar 25:e0039425. doi: 10.1128/jcm.00394.
    >> Share

  174. YU S, Liu N, Xie Z, Zeng Y, et al
    Nanopore sequencing for precise detection of Mycobacterium tuberculosis and drug resistance: a retrospective multicenter study in China.
    J Clin Microbiol. 2025 Mar 19:e0181324. doi: 10.1128/jcm.01813.
    >> Share

  175. MCMAHON J, Tomita N, Tatishev ES, Workman AA, et al
    A novel framework for the automated characterization of Gram-stained blood culture slides using a large-scale vision transformer.
    J Clin Microbiol. 2025;63:e0151424.
    >> Share

  176. WEIGL S, Dabernig-Heinz J, Granitz F, Lipp M, et al
    Improving Nanopore sequencing-based core genome MLST for global infection control: a strategy for GC-rich pathogens like Burkholderia pseudomallei.
    J Clin Microbiol. 2025;63:e0156924.
    >> Share

  177. JARAMILLO CARTAGENA A, Asowata OE, Ng D, Babady NE, et al
    An overview of the laboratory diagnosis of Pneumocystis jirovecii pneumonia.
    J Clin Microbiol. 2025;63:e0036124.
    >> Share

  178. GONZALEZ-LARA MF, Roman-Montes CM, Diaz-Lomeli P, Hernandez-Ceballos W, et al
    Comparison of the Filamentous Fungi Library v4.0 MALDI Biotyper Platform vs MSI-2 performance for identifying filamentous fungi from liquid cultures.
    J Clin Microbiol. 2025;63:e0137124.
    >> Share

  179. KOMINE T, Fukano H, Yoshida M, Miyamoto Y, et al
    A rapid and simple MALDI-TOF MS lipid profiling method for differentiating Mycobacterium ulcerans from Mycobacterium marinum.
    J Clin Microbiol. 2025;63:e0140024.
    >> Share

  180. CUELLA-MARTIN I, Runyambo D, De Bock S, Diels M, et al
    Direct thin-layer agar for bedaquiline-susceptibility testing of Mycobacterium tuberculosis at BSL2 level yields high accuracy in 15 days from sputum processing.
    J Clin Microbiol. 2025 Mar 3:e0180624. doi: 10.1128/jcm.01806.
    >> Share

    February 2025
  181. JORTH P, Manuel C, McLemore T, Humphries RM, et al
    Evaluation of antimicrobial susceptibility testing methods for Burkholderia cepacia complex isolates from people with and without cystic fibrosis.
    J Clin Microbiol. 2025;63:e0148024.
    >> Share

  182. WEYAND LK, Felts BL, Cassirer EF, Jenks JA, et al
    Fatal interactions: pneumonia in bighorn lambs following experimental exposure to carriers of Mycoplasma ovipneumoniae.
    J Clin Microbiol. 2025;63:e0132824.
    >> Share

  183. RANSOM EM, Wallace MA, Wiederhold NP, Canete-Gibas C, et al
    Evaluation of two MALDI-TOF MS systems and extraction methods for identification of filamentous fungi recovered from clinical specimens.
    J Clin Microbiol. 2025;63:e0154824.
    >> Share

  184. KHAN A, Manuel C, Maynard R, Humphries RM, et al
    Evaluation of piperacillin-tazobactam disks using contemporary Enterobacterales isolates suggests the need for disk potency optimization.
    J Clin Microbiol. 2025;63:e0159924.
    >> Share

  185. PEIRANO G, Pitout JDD
    Rapidly spreading Enterobacterales with OXA-48-like carbapenemases.
    J Clin Microbiol. 2025;63:e0151524.
    >> Share

  186. ROCCHI S, Scherer E, White PL, Guitton A, et al
    Interlaboratory assays from the fungal PCR Initiative and the Modimucor Study Group to improve qPCR detection of Mucorales DNA in serum: one more step toward standardization.
    J Clin Microbiol. 2025;63:e0152524.
    >> Share

  187. SAYEED MA, Nabil IK, Bhattacharjee P, Hossain MS, et al
    Assembly and performance of a cholera RDT prototype that detects both Vibrio cholerae and associated bacteriophage as a proxy for pathogen detection.
    J Clin Microbiol. 2025;63:e0144324.
    >> Share

  188. SANCHEZ GJ, Cuypers L, Laenen L, Majek P, et al
    Prediction of antimicrobial susceptibility of pneumococci based on whole-genome sequencing data: a direct comparison of two genomic tools to conventional antimicrobial susceptibility testing.
    J Clin Microbiol. 2025;63:e0107924.
    >> Share

  189. CINTRON M, Clark B, Miranda E, Babady NE, et al
    Utility of digital images captured after 4 h of incubation on a microbiology laboratory automation system in guiding the work-up of subcultures from positive blood cultures.
    J Clin Microbiol. 2025;63:e0132024.
    >> Share

  190. SCHWAB TC, Joseph L, Moono A, Goller PC, et al
    Field evaluation of nanopore targeted next-generation sequencing to predict drug-resistant tuberculosis from native sputum in South Africa and Zambia.
    J Clin Microbiol. 2025 Feb 12:e0139024. doi: 10.1128/jcm.01390.
    >> Share

    January 2025
  191. RICKMAN HM, Phiri MD, Mbale H, Horton KC, et al
    Low concordance between QIAreach QuantiFERON-TB, a novel interferon-gamma release assay, and QuantiFERON-TB Gold Plus, in a population-based survey in Blantyre, Malawi.
    J Clin Microbiol. 2025;63:e0132324.
    >> Share

  192. XU N, Wen S, Yao Y, Guan Y, et al
    Two-transcript signature for differentiation and clinical outcomes in severe fever with thrombocytopenia syndrome (SFTS) patients: a double-blind, multicenter, validation study.
    J Clin Microbiol. 2025;63:e0128224.
    >> Share

  193. TANSARLI GS, Falagas ME, Fang FC
    Clinical significance of toxin EIA positivity in patients with suspected Clostridioides difficile infection: systematic review and meta-analysis.
    J Clin Microbiol. 2025;63:e0097724.
    >> Share

  194. PERIYASAMY D, Huang Y, Hill JE
    Targeted syndromic next-generation sequencing panel for simultaneous detection of pathogens associated with bovine reproductive failure.
    J Clin Microbiol. 2025;63:e0143324.
    >> Share

  195. LIU H, Zhang L, Jiang M, Zhang Y, et al
    Rapid detection of carbapenemase production in Aeromonas using phenotypic tests based on colorimetric microtube assay.
    J Clin Microbiol. 2025;63:e0110424.
    >> Share

  196. CHOU C-H, Chao Q-T, Lu Y-S, Lee T-F, et al
    Comparison of the BluePoint MoldID oligonucleotide array and Bruker Biotyper MALDI-TOF MS for the identification of filamentous fungi.
    J Clin Microbiol. 2025;63:e0104824.
    >> Share

  197. CHEON DH, Jang H, Choi YK, Oh WS, et al
    Clinical evaluation of advanced MALDI-TOF MS for carbapenemase subtyping in Gram-negative isolates.
    J Clin Microbiol. 2025;63:e0147524.
    >> Share

  198. CANDELA A, Rodriguez-Temporal D, Lumbreras P, Guijarro-Sanchez P, et al
    Multicenter evaluation of Fourier transform infrared (FTIR) spectroscopy as a first-line typing tool for carbapenemase-producing Klebsiella pneumoniae in clinical settings.
    J Clin Microbiol. 2025;63:e0112224.
    >> Share

  199. MCTAGGART LR, Cronin K, Ruscica S, Patel SN, et al
    Emergence of terbinafine-resistant Trichophyton indotineae in Ontario, Canada, 2014-2023.
    J Clin Microbiol. 2025;63:e0153524.
    >> Share

  200. WINKLER ML, Deshpande L, Kimbrough JH, Karr M, et al
    Anidulafungin is a useful surrogate marker for predicting in vitro susceptibility to rezafungin among five Candida species using CLSI methods and interpretive criteria.
    J Clin Microbiol. 2025 Jan 22:e0112924. doi: 10.1128/jcm.01129.
    >> Share

  201. LAMBERINK H, Huygens S, Aerts R, Lagrou K, et al
    Multicenter validation of a galactomannan chemiluminescence immunoassay for the diagnosis of pulmonary aspergillosis on serum of patients with hematological disease.
    J Clin Microbiol. 2025 Jan 21:e0105324. doi: 10.1128/jcm.01053.
    >> Share

  202. GALI V, Al-Ghanamah R, Finnigan K, Kalchiem-Dekel O, et al
    Evaluating the clinical utility of Aspergillus, Mucorales, and Nocardia bronchoalveolar PCRs for the diagnosis of invasive pulmonary infections in patients with hematological malignancies.
    J Clin Microbiol. 2025 Jan 16:e0135524. doi: 10.1128/jcm.01355.
    >> Share

    December 2024
  203. OLSON AM, Wood RC, Weigel KM, Yan AJ, et al
    High-sensitivity detection of Mycobacterium tuberculosis DNA in tongue swab samples.
    J Clin Microbiol. 2024 Dec 31:e0114024. doi: 10.1128/jcm.01140.
    >> Share

  204. WINKLER ML, Rhomberg PR, Fedler KA, Huband MD, et al
    Use of voriconazole to predict susceptibility and resistance to isavuconazole for Aspergillus fumigatus using CLSI methods and interpretive criteria.
    J Clin Microbiol. 2024 Dec 20:e0120724. doi: 10.1128/jcm.01207.
    >> Share

  205. PENVEN M, Louazon M, Freret C, Sauron A, et al
    Comparative performances of the Qvella FAST system and conventional methods for rapid identification and antibiotic susceptibility testing on monomicrobial positive blood cultures.
    J Clin Microbiol. 2024 Dec 20:e0133224. doi: 10.1128/jcm.01332.
    >> Share

  206. AUPAIX A, Verroken A, Rodriguez-Villalobos H
    Evaluation of a new protocol for rapid identification of Streptococcus pneumoniae in blood cultures using the modified bile solubility test: Gram staining is still standing.
    J Clin Microbiol. 2024 Dec 18:e0122224. doi: 10.1128/jcm.01222.
    >> Share

  207. REN X, Suo B, Li C, Ping G, et al
    Comparative analysis of the detection of antibiotic genotypic resistance with gastric mucosa, gastric fluid, and fecal samples in patients with Helicobacter pylori infection.
    J Clin Microbiol. 2024 Dec 16:e0103424. doi: 10.1128/jcm.01034.
    >> Share

  208. GUIRAUD J, Piau C, Enault C, Nkpa Charron E, et al
    Comparison of the molecular FluoroType Mycobacteria VER 1.0 and the Maldi BioTyper Mycobacteria assays for the identification of non-tuberculous mycobacteria.
    J Clin Microbiol. 2024 Dec 11:e0120624. doi: 10.1128/jcm.01206.
    >> Share

  209. KHODADADI RB, El Zein S, Rivera O'Connor CG, Stevens RW, et al
    Retrospective analysis of antimicrobial susceptibility profiles of non-diphtheriae Corynebacterium species from a tertiary hospital and reference laboratory, 2012-2023.
    J Clin Microbiol. 2024;62:e0119924.
    >> Share

  210. DE HOOG S, Walsh TJ, Ahmed SA, Alastruey-Izquierdo A, et al
    Nomenclature for human and animal fungal pathogens and diseases: a proposal for standardized terminology.
    J Clin Microbiol. 2024;62:e0093724.
    >> Share

  211. TAWDE Y, Das S, Singh S, Basak S, et al
    Evaluation of Fungitell (1,3)-beta-D-glucan assay in tear samples for rapid diagnosis of fungal keratitis.
    J Clin Microbiol. 2024;62:e0120024.
    >> Share

  212. CARELLA A, Carroll KC, Munson E
    Update on novel validly published and included bacterial taxa derived from human clinical specimens and taxonomic revisions published in 2023.
    J Clin Microbiol. 2024;62:e0100424.
    >> Share

  213. LUU LDW, Rafique R, Payne M, Octavia S, et al
    Deciphering Bordetella pertussis epidemiology through culture-independent multiplex amplicon and metagenomic sequencing.
    J Clin Microbiol. 2024;62:e0117824.
    >> Share

  214. LANDIVAR SM, Melli LJ, Maiztegui C, Schesi C, et al
    A novel multiplex and glycoprotein-based immunochromatographic serologic IgM test for the rapid diagnosis of Escherichia coli O157 and O145 causing bloody diarrhea and hemolytic uremic syndrome.
    J Clin Microbiol. 2024;62:e0100324.
    >> Share

  215. SNYDER JW, Chaudhry N, Hoffmann W
    Performance of the LifeScale automated rapid phenotypic antimicrobial susceptibility testing on Gram-negative rods directly from positive blood cultures.
    J Clin Microbiol. 2024;62:e0092224.
    >> Share

    November 2024
  216. ALVAREZ OTERO J, Mandrekar J, Wolf MJ, Starkey JC, et al
    Pleural space infection microbiology as assessed using a clinical sequencing-based assay: Fusobacterium nucleatum group, Streptococcus intermedius, and other oral normal microbiota are the most common bacteria identified in community-acquired pleural
    J Clin Microbiol. 2024 Nov 25:e0069424. doi: 10.1128/jcm.00694.
    >> Share

  217. SABOUR S, Harrington KRV, Martinson E, Bhatnagar AS, et al
    Characterization of carbapenem-resistant Enterobacterales and Pseudomonas aeruginosa carrying multiple carbapenemase genes-Antimicrobial Resistance Laboratory Network, 2018-2022.
    J Clin Microbiol. 2024 Nov 20:e0122024. doi: 10.1128/jcm.01220.
    >> Share

  218. CHAN H-H, Wang Y-C, Jou R
    A simplified pyrazinamidase test for Mycobacterium tuberculosis pyrazinamide antimicrobial susceptibility testing.
    J Clin Microbiol. 2024 Nov 18:e0122724. doi: 10.1128/jcm.01227.
    >> Share

  219. OSTERMANN G, Korber-Irrgang B, Kruger A, Singh P, et al
    Performance evaluation of the Specific Reveal system for rapid antibiotic susceptibility testing from positive blood cultures containing Gram-negative pathogens.
    J Clin Microbiol. 2024 Nov 15:e0069224. doi: 10.1128/jcm.00692.
    >> Share

  220. CASTELLANOS LR, Chaffee R, Kumar H, Mezgebo BK, et al
    A novel machine-learning aided platform for rapid detection of urine ESBLs and carbapenemases: URECA-LAMP.
    J Clin Microbiol. 2024;62:e0086924.
    >> Share

  221. KERING K, Njaanake K, Wairimu C, Mureithi M, et al
    Shedding of nontyphoidal Salmonella by asymptomatic convalescing children under 5 years as a risk factor for invasive disease in Mukuru informal settlement in Nairobi, Kenya.
    J Clin Microbiol. 2024;62:e0075024.
    >> Share

  222. YOUNG EL, Roach DJ, Martinsen MA, McGrath GEG, et al
    Clinical pilot of bacterial transcriptional profiling as a combined genotypic and phenotypic antimicrobial susceptibility test.
    J Clin Microbiol. 2024;62:e0099724.
    >> Share

  223. LEE RA
    Clinical performance evaluation of the BioFire Joint Infection Panel.
    J Clin Microbiol. 2024;62:e0102224.
    >> Share

  224. PUTHAWALA CM, Feinn RS, Rivera-Vinas J, Lee H, et al
    Persistent bloodstream infection in children: examining the role for repeat blood cultures.
    J Clin Microbiol. 2024;62:e0099824.
    >> Share

  225. BIGGEL M, Cernela N, Horlbog JA, Stephan R, et al
    Oxford Nanopore's 2024 sequencing technology for Listeria monocytogenes outbreak detection and source attribution: progress and clone-specific challenges.
    J Clin Microbiol. 2024;62:e0108324.
    >> Share

  226. SMITH AC, Shrivastava A, Cartee JC, Belanger M, et al
    Whole-genome sequencing resolves biochemical misidentification of Neisseria species from urogenital specimens.
    J Clin Microbiol. 2024;62:e0070424.
    >> Share

  227. LEMON JK, Jankowsi-Romano C, Duong S, Juretschko S, et al
    Evaluation of gradient strip diffusion for susceptibility testing of aztreonam-avibactam in metallo-beta-lactamase-producing Enterobacterales.
    J Clin Microbiol. 2024;62:e0064924.
    >> Share

  228. BASHEER M, Sasic K, Carlsson A, Vestberg N, et al
    A novel LAMP-based assay for the identification of Streptococcus pneumoniae and Streptococcus pseudopneumoniae in clinical isolates.
    J Clin Microbiol. 2024 Nov 11:e0091224. doi: 10.1128/jcm.00912.
    >> Share

  229. IMAI K, Sato A, Tanaka M, Ohama Y, et al
    Prospective evaluation of non-invasive saliva specimens for the diagnosis of syphilis and molecular surveillance of Treponema pallidum.
    J Clin Microbiol. 2024 Nov 6:e0080924. doi: 10.1128/jcm.00809.
    >> Share

  230. NG S, Tan CY, Yah JY, Osman NAB, et al
    Evaluation of the QIAstat-Dx BCID GN and GPF kits for direct identification and antimicrobial resistance prediction from blood culture bottles.
    J Clin Microbiol. 2024 Nov 6:e0116924. doi: 10.1128/jcm.01169.
    >> Share

  231. SCHUB T, Klugherz I, Wagener J, Prattes J, et al
    Serum antigen tests for the diagnosis of invasive aspergillosis: a retrospective comparison of five Aspergillus antigen assays and one beta-D-glucan assay.
    J Clin Microbiol. 2024 Nov 4:e0095024. doi: 10.1128/jcm.00950.
    >> Share

    October 2024
  232. GIBERT C, Tirard-Collet P, Miossec C, Dupont D, et al
    Reverse-transcriptase real-time PCR in the diagnostic strategy for invasive infections caused by Aspergillus fumigatus.
    J Clin Microbiol. 2024 Oct 24:e0079124. doi: 10.1128/jcm.00791.
    >> Share

  233. GAEDDERT M, Glaser K, Chendi BH, Sultanli A, et al
    Host blood protein biomarkers to screen for tuberculosis disease: a systematic review and meta-analysis.
    J Clin Microbiol. 2024 Oct 24:e0078624. doi: 10.1128/jcm.00786.
    >> Share

  234. MCHUGH JW, Bayless DR, Ranganath N, Stevens RW, et al
    Candida guilliermondii fungemia: a 12-year retrospective review of antimicrobial susceptibility patterns at a reference laboratory and tertiary care center.
    J Clin Microbiol. 2024 Oct 23:e0105724. doi: 10.1128/jcm.01057.
    >> Share

  235. HAREL F, Robert-Gangneux F, Gangneux J-P, Guegan H, et al
    Monocentric evaluation of the Novaplex dermatophyte multiplex qPCR assay in the diagnosis of dermatophytoses.
    J Clin Microbiol. 2024;62:e0089424.
    >> Share

  236. BERINSON B, Davies E, Torpner J, Flinkfeldt L, et al
    A multicenter evaluation of a novel microfluidic rapid AST assay for Gram-negative bloodstream infections.
    J Clin Microbiol. 2024;62:e0045824.
    >> Share

  237. RIVAS L, Horn B, Armstrong B, Wright J, et al
    A case-control study and molecular epidemiology of yersiniosis in Aotearoa New Zealand.
    J Clin Microbiol. 2024;62:e0075424.
    >> Share

  238. M'IKANATHA NM, Goldblum ZS, Cesari N, Nawrocki EM, et al
    Outbreak-associated Salmonella Baildon found in wastewater demonstrates how sewage monitoring can supplement traditional disease surveillance.
    J Clin Microbiol. 2024;62:e0082524.
    >> Share

  239. HASAN R, Azizullah Z, Shams H, Dittrich S, et al
    Evaluation of a point-of-care multiplex immunochromatographic assay for the diagnosis of typhoid: results from a retrospective diagnostic accuracy study.
    J Clin Microbiol. 2024;62:e0042824.
    >> Share

  240. LEBER AL, Oyeniran SJ, Wang H
    Reduced sensitivity of a multiplex commercial respiratory panel for detection of Mycoplasma pneumoniae is due to specimen type.
    J Clin Microbiol. 2024;62:e0113924.
    >> Share

  241. CAMPBELL S, Taylor B, Menouhos D, Hennessy J, et al
    Performance of MALDI-TOF MS, real-time PCR, antigen detection, and automated biochemical testing for the identification of Burkholderia pseudomallei.
    J Clin Microbiol. 2024;62:e0096124.
    >> Share

  242. MCMILLAN IA, Norris MH, Golon SJ, Franckowiak GA, et al
    Serosurveillance of Coxiella burnetii in feral swine populations of Hawai'i and Texas identifies overlap with human Q fever incidence.
    J Clin Microbiol. 2024;62:e0078024.
    >> Share

  243. SANTOS STREAUSLIN J, Nielsen DW, Schwartz KJ, Derscheid RJ, et al
    Characterization of neurologic disease-associated Streptococcus suis strains within the United States swine herd and use of diagnostic tools.
    J Clin Microbiol. 2024 Oct 8:e0037424. doi: 10.1128/jcm.00374.
    >> Share

    September 2024
  244. LUUKINEN B, Aittoniemi J, Miikkulainen-Lahti T, Mentula S, et al
    Evaluation of the STANDARD M10 MDR-TB and MTB/NTM assays for the detection of Mycobacterium tuberculosis, rifampicin and isoniazid resistance, and nontuberculous mycobacteria in a low-incidence setting.
    J Clin Microbiol. 2024 Sep 19:e0040224. doi: 10.1128/jcm.00402.
    >> Share

  245. MANUEL C, Maynard R, Simpkins S, Haro M, et al
    Evaluation of an expanded antibiotic resistance gene panel on prediction of antimicrobial susceptibility results for Gram-negative bacteria in blood cultures.
    J Clin Microbiol. 2024 Sep 19:e0102024. doi: 10.1128/jcm.01020.
    >> Share

  246. MITCHELL BI, Kling K, Bolon MK, Rathod SN, et al
    Identifying Candida auris transmission in a hospital outbreak investigation using whole-genome sequencing and SNP phylogenetic analysis.
    J Clin Microbiol. 2024 Sep 16:e0068024. doi: 10.1128/jcm.00680.
    >> Share

  247. EICKHOFF MJ, Dumm RE
    The Brief Case: Tricky Trichosporon asahii in the urinary tract.
    J Clin Microbiol. 2024;62:e0055724.
    >> Share

  248. SCHWEBKE JR, Nyirjesy P, Dsouza M, Getman D, et al
    Vaginitis and risk of sexually transmitted infections: results of a multi-center U.S. clinical study using STI nucleic acid amplification testing.
    J Clin Microbiol. 2024;62:e0081624.
    >> Share

  249. KEHRMANN J, Stumpf AL, Dragaqina A, Buer J, et al
    Improved detection of mycobacteria in CF and tissue samples grown in mycobacteria growth indicator tube incubated at 30 degrees C compared to conventional growth conditions of liquid and solid media.
    J Clin Microbiol. 2024;62:e0068324.
    >> Share

  250. CABIBBE AM, Moghaddasi K, Batignani V, Morgan GSK, et al
    Nanopore-based targeted sequencing test for direct tuberculosis identification, genotyping, and detection of drug resistance mutations: a side-by-side comparison of targeted next-generation sequencing technologies.
    J Clin Microbiol. 2024 Sep 6:e0081524. doi: 10.1128/jcm.00815.
    >> Share

    August 2024
  251. RUMKE LW, Davies MA, Vestjens SMT, van der Putten BCL, et al
    Nationwide upsurge in invasive disease in the context of longitudinal surveillance of carriage and invasive Streptococcus pyogenes 2009-2023, the Netherlands: a molecular epidemiological study.
    J Clin Microbiol. 2024 Aug 28:e0076624. doi: 10.1128/jcm.00766.
    >> Share

  252. CHRISTIANS FC, Akhund-Zade J, Jarman K, Venkatasubrahmanyam S, et al
    Analytical and clinical validation of direct detection of antimicrobial resistance markers by plasma microbial cell-free DNA sequencing.
    J Clin Microbiol. 2024 Aug 28:e0042524. doi: 10.1128/jcm.00425.
    >> Share

  253. SMITH A, Wong-O'Brien B, Lieberman JA, Cookson BT, et al
    The Brief Case: A case of tinea corporis caused by drug-resistant Trichophyton indotineae identified by broad-range fungal DNA sequencing.
    J Clin Microbiol. 2024;62:e0023424.
    >> Share

  254. CRAWFORD LC, Kidd SE
    Photo Quiz: Subungual organism in a renal transplant patient.
    J Clin Microbiol. 2024;62:e0171023.
    >> Share

  255. BUENESTADO-SERRANO S, Martinez-Lirola M, Dippenaar A, Sanz-Perez A, et al
    Bridging the gap between molecular and genomic epidemiology in tuberculosis: inferring MIRU-VNTR patterns from genomic data.
    J Clin Microbiol. 2024 Aug 13:e0074124. doi: 10.1128/jcm.00741.
    >> Share

    July 2024
  256. OMAR SV, Louw G, Ismail F, Liu X, et al
    Performance evaluation of the Xpert MTB/XDR test for the detection of drug resistance to Mycobacterium tuberculosis among people diagnosed with tuberculosis in South Africa.
    J Clin Microbiol. 2024 Jul 26:e0022924. doi: 10.1128/jcm.00229.
    >> Share

  257. AKINAGA A, Takahashi M, Yamazaki T, Chikamatsu K, et al
    Development and preliminary evaluation toward a new tuberculosis treatment monitoring tool: the PATHFAST TB LAM Ag assay.
    J Clin Microbiol. 2024 Jul 19:e0062924. doi: 10.1128/jcm.00629.
    >> Share

  258. RATTIN J, Marigney K, Miranda C, Arrossi AV, et al
    The Brief Case: False-negative Pneumocystis PCR.
    J Clin Microbiol. 2024;62:e0009424.
    >> Share

  259. MAUFFREY F, Bertelli C, Greub G, Senn L, et al
    Genomic evolution of ST228 SCCmec-I MRSA 10 years after a major nosocomial outbreak.
    J Clin Microbiol. 2024;62:e0020324.
    >> Share

  260. LEE H-W, Yu H-J, Kim H, Yun SA, et al
    Comparative evaluation of the STANDARD M10 and Xpert C. difficile assays for detection of toxigenic Clostridioides difficile in stool specimens.
    J Clin Microbiol. 2024;62:e0052424.
    >> Share

  261. SULLIVAN KV, Long T, Hillesland E, Rhoads DD, et al
    Low utilization of epidemiological cutoff values to interpret in vitro antifungal susceptibility testing among clinical laboratory participants in two College of American Pathologists (CAP) proficiency testing programs.
    J Clin Microbiol. 2024;62:e0042124.
    >> Share

  262. MACCARI L, Ceriana P, Granchetti HN, Pezzaniti AV, et al
    Improved Blue Carba test and Carba NP test for detection and classification of major Class A and B carbapenemases, including dual producers, among Gram-negative bacilli.
    J Clin Microbiol. 2024;62:e0125523.
    >> Share

  263. BIVAND JM, Dyrhovden R, Sivertsen A, Tellevik MG, et al
    Broad-range amplification and sequencing of the rpoB gene: a novel assay for bacterial identification in clinical microbiology.
    J Clin Microbiol. 2024;62:e0026624.
    >> Share

  264. WANG H, Yu D, Chen X, Zhou Y, et al
    Performance of rapid on-site evaluation of touch imprints of bronchoscopic biopsies or lung tissue biopsies for the diagnosis of invasive pulmonary filamentous fungi infections in non-neutropenic patients.
    J Clin Microbiol. 2024;62:e0047924.
    >> Share

  265. HOCKMAN BE, Qi M, Rotblatt H, Borenstein L, et al
    Overcoming analytical and preanalytical challenges associated with extragenital home collected STI specimens.
    J Clin Microbiol. 2024;62:e0031124.
    >> Share

  266. ZHANG J, Xu J, Shen S, Ding L, et al
    Comparison of three colloidal gold immunoassays and GeneXpert Carba-R for the detection of Klebsiella pneumoniae bla(KPC-2) variants.
    J Clin Microbiol. 2024;62:e0015424.
    >> Share

  267. CHENG A, Das A, Styles CE, Naing Z, et al
    Improved efficiency using sequential automated immunoassays for syphilis screening in blood donors.
    J Clin Microbiol. 2024 Jul 15:e0047624. doi: 10.1128/jcm.00476.
    >> Share

  268. PIRES J, Brandal LT, Naseer U
    Development and implementation of a core genome multilocus sequence typing scheme for Yersinia enterocolitica: a tool for surveillance and outbreak detection.
    J Clin Microbiol. 2024 Jul 11:e0004024. doi: 10.1128/jcm.00040.
    >> Share

  269. BERTRAM R, Itzek A, Marr L, Manzke J, et al
    Divergent effects of emm types 1 and 12 on invasive group A streptococcal infections-results of a retrospective cohort study, Germany 2023.
    J Clin Microbiol. 2024 Jul 11:e0063724. doi: 10.1128/jcm.00637.
    >> Share

  270. ALLAN-BLITZ L-T, Villarreal D, Klausner JD
    IgM tests for detecting Treponema pallidum infection in newborns: time to establish a reference comparator.
    J Clin Microbiol. 2024 Jul 11:e0055124. doi: 10.1128/jcm.00551.
    >> Share

    June 2024
  271. BANIK S, Ozay B, Trejo M, Zhu Y, et al
    A simple and sensitive test for Candida auris colonization, surveillance, and infection control suitable for near patient use.
    J Clin Microbiol. 2024 Jun 18:e0052524. doi: 10.1128/jcm.00525.
    >> Share

  272. PUTNAM NE, Tayabali K, Yu JR, Decolin I, et al
    The Brief Case: Yeast, chlamydospores, and hyphae-a case of disseminated mucormycosis.
    J Clin Microbiol. 2024;62:e0163823.
    >> Share

  273. DABERNIG-HEINZ J, Wagner GE, Prior K, Lipp M, et al
    Core genome multilocus sequence typing (cgMLST) applicable to the monophyletic Klebsiella oxytoca species complex.
    J Clin Microbiol. 2024;62:e0172523.
    >> Share

  274. GOSHIA T, Aralar A, Wiederhold N, Jenks JD, et al
    Universal digital high-resolution melting for the detection of pulmonary mold infections.
    J Clin Microbiol. 2024;62:e0147623.
    >> Share

  275. BAKER AW, Nick SE, Jia F, Graves AM, et al
    Mycobacterium immunogenum acquisition from hospital tap water: a genomic and epidemiologic analysis.
    J Clin Microbiol. 2024;62:e0014924.
    >> Share

  276. HOYT KM, Barr JR, Hopkins AO, Dykes JK, et al
    Validation of a clinical assay for botulinum neurotoxins through mass spectrometric detection.
    J Clin Microbiol. 2024;62:e0162923.
    >> Share

  277. SCHEUTZ F, Nielsen CH, von Mentzer A
    Construction of the ETECFinder database for the characterization of enterotoxigenic Escherichia coli (ETEC) and revision of the VirulenceFinder web tool at the CGE website.
    J Clin Microbiol. 2024;62:e0057023.
    >> Share

  278. PEREYRE S, Henin N, Dolzy A, Guiraud J, et al
    Evaluation of commercial, customized microdilution plates for Ureaplasma parvum, Ureaplasma urealyticum, and Mycoplasma hominis antimicrobial susceptibility testing and determination of antimicrobial resistance prevalence in France.
    J Clin Microbiol. 2024 Jun 4:e0022624. doi: 10.1128/jcm.00226.
    >> Share

    May 2024
  279. SERRANO-LOBO J, Reigadas E, Munoz P, Escribano P, et al
    Azole resistance screening in Aspergillus fumigatus sensu stricto using the azole-containing agar method (EUCAST E.Def 10.2): conidial suspension filtration and inoculum adjustment before inoculum preparation may not be needed.
    J Clin Microbiol. 2024 May 31:e0036924. doi: 10.1128/jcm.00369.
    >> Share

  280. MISAS E, Seagle E, Jenkins EN, Rajeev M, et al
    Erratum for Misas et al., "Genomic description of acquired fluconazole- and echinocandin-resistance in patients with serial Candida glabrata isolates".
    J Clin Microbiol. 2024 May 22:e0060824. doi: 10.1128/jcm.00608.
    >> Share

  281. ATTAWAY CC, Tobin E, Rhoads DD
    Photo Quiz: Unusual phenotypic and Lancefield group testing in blood culture isolate.
    J Clin Microbiol. 2024;62:e0118723.
    >> Share

  282. FISHER J, Garrett EM
    The Brief Case: Cardiobacterium hominis endocarditis in a pediatric patient with congenital heart disease.
    J Clin Microbiol. 2024;62:e0156523.
    >> Share

  283. HAMILTON-SETH R, Streva V, Gammel N, Campodonico VL, et al
    Evaluation of false-positive Rhodotorula detections by a multiplex PCR-based fungal panel performed on positive blood culture bottles.
    J Clin Microbiol. 2024;62:e0017924.
    >> Share

  284. OSBORN LJ, Fissel J, Gomez S, Mestas J, et al
    Development of an automated amplicon-based next-generation sequencing pipeline for rapid detection of bacteria and fungi directly from clinical specimens.
    J Clin Microbiol. 2024;62:e0174923.
    >> Share

  285. LANDRY ML, Hassan S, Rottmann BG, Pesak SJ, et al
    Performance of two modified two-tier algorithms for the serologic diagnosis of Lyme disease.
    J Clin Microbiol. 2024;62:e0013924.
    >> Share

  286. JACOT D, Gizha S, Orny C, Fernandes M, et al
    Development and evaluation of an artificial intelligence for bacterial growth monitoring in clinical bacteriology.
    J Clin Microbiol. 2024;62:e0165123.
    >> Share

  287. MOSTAFA HH
    An evolution of Nanopore next-generation sequencing technology: implications for medical microbiology and public health.
    J Clin Microbiol. 2024;62:e0024624.
    >> Share

  288. BOGAERTS B, Van den Bossche A, Verhaegen B, Delbrassinne L, et al
    Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
    J Clin Microbiol. 2024;62:e0157623.
    >> Share

  289. FOUAD A, Simner PJ, Nicolau DP, Asempa TE, et al
    Comparison of BD Phoenix and disk diffusion to broth microdilution for determining cefepime susceptibility among carbapenem-resistant Enterobacterales.
    J Clin Microbiol. 2024 May 7:e0152023. doi: 10.1128/jcm.01520.
    >> Share

  290. FRANCO LC, Ahmed M, Kendra CG, Sperling RM, et al
    Validation of a qualitative real-time PCR assay for the detection of Candida auris in hospital inpatient screening.
    J Clin Microbiol. 2024 May 1:e0015824. doi: 10.1128/jcm.00158.
    >> Share

    April 2024
  291. MORENO A, Mah J, Budvytiene I, Ho DY, et al
    Dynamics and prognostic value of plasma cell-free DNA PCR in patients with invasive aspergillosis and mucormycosis.
    J Clin Microbiol. 2024 Apr 11:e0039424. doi: 10.1128/jcm.00394.
    >> Share

  292. STREVA VA, Weinstein J, Jankowski-Romano C, Osakwe N, et al
    The Brief Case: Incidental finding of Brucella abortus bacteremia in a patient with urinary tract infection.
    J Clin Microbiol. 2024;62:e0138123.
    >> Share

  293. WEEBER P, Singh N, Lapierre P, Mingle L, et al
    A novel hybridization capture method for direct whole genome sequencing of clinical specimens to inform Legionnaires' disease investigations.
    J Clin Microbiol. 2024;62:e0130523.
    >> Share

  294. ITO A, Ishida T, Tachibana H, Nakanishi Y, et al
    Identification rate of Legionella species in non-purulent sputum culture is comparable to that in purulent sputum culture in Legionella pneumonia.
    J Clin Microbiol. 2024;62:e0166523.
    >> Share

  295. GIFFEN SR, Stoeppler E, Elliott A, Miller MB, et al
    Evaluation of analyte-specific reagents for the direct detection of Pneumocystis jirovecii.
    J Clin Microbiol. 2024;62:e0004524.
    >> Share

  296. GHANEM-ZOUBI N, Mustafa-Hellou M, Zahran M, Gazit L, et al
    The integration of Coxiella burnetii PCR testing in serum into the diagnostic algorithm of suspected acute Q fever in an endemic setting.
    J Clin Microbiol. 2024;62:e0170323.
    >> Share

  297. WALSH TJ, Mencacci A, Paggi R, Douka E, et al
    Prospective observational pilot study of the T2Resistance panel in the T2Dx system for detection of resistance genes in bacterial bloodstream infections.
    J Clin Microbiol. 2024;62:e0129623.
    >> Share

  298. PENG Y, Williams MM, Xiaoli L, Simon A, et al
    Strengthening Bordetella pertussis genomic surveillance by direct sequencing of residual positive specimens.
    J Clin Microbiol. 2024;62:e0165323.
    >> Share

  299. MCELVANIA E, Mindel S, Lemstra J, Brands K, et al
    Automated detection of methicillin-resistant Staphylococcus aureus with the MRSA CHROM imaging application on BD Kiestra Total Lab Automation System.
    J Clin Microbiol. 2024 Apr 1:e0144523. doi: 10.1128/jcm.01445.
    >> Share

    March 2024
  300. SIOPI M, Pachoulis I, Leventaki S, Spruijtenburg B, et al
    Evaluation of the Vitek 2 system for antifungal susceptibility testing of Candida auris using a representative international panel of clinical isolates: overestimation of amphotericin B resistance and underestimation of fluconazole resistance.
    J Clin Microbiol. 2024 Mar 19:e0152823. doi: 10.1128/jcm.01528.
    >> Share

  301. WOOD RC, Luabeya AK, Dragovich RB, Olson AM, et al
    Diagnostic accuracy of tongue swab testing on two automated tuberculosis diagnostic platforms, Cepheid Xpert MTB/RIF Ultra and Molbio Truenat MTB Ultima.
    J Clin Microbiol. 2024 Mar 14:e0001924. doi: 10.1128/jcm.00019.
    >> Share

  302. GIFFEN SR, Alby K
    The Brief Case: A case of bloodstream infection with Corynebacterium kroppenstedtii in an infant.
    J Clin Microbiol. 2024;62:e0082023.
    >> Share

  303. WENGENACK NL, Brown-Elliott BA, Parrish NM, Salfinger M, et al
    This is giving me a complex: a practical attempt to streamline nontuberculous mycobacteria nomenclature for clinical purposes.
    J Clin Microbiol. 2024;62:e0153123.
    >> Share

  304. CALDWELL M, Tisdale J, Khare R
    Improved recovery of nontuberculous mycobacteria in culture with adjunctive use of a selective agar.
    J Clin Microbiol. 2024;62:e0167823.
    >> Share

  305. PEIRANO G, Castellanos LR, Matsumura Y, Chaffee R, et al
    Clinical validation of loop-mediated isothermal amplification for the detection of Escherichia coli sequence type complex 131.
    J Clin Microbiol. 2024;62:e0168723.
    >> Share

  306. LUUKINEN B, Antikainen J, Aittoniemi J, Miikkulainen-Lahti T, et al
    Evaluation of the FluoroType Mycobacteria assay for identification of mycobacteria.
    J Clin Microbiol. 2024;62:e0105423.
    >> Share

  307. RANGANATH N, Mendoza MA, Stevens R, Kind D, et al
    Rhodococcus infection: a 10-year retrospective analysis of clinical experience and antimicrobial susceptibility profile.
    J Clin Microbiol. 2024;62:e0153723.
    >> Share

  308. VINAYARAJ EV, Thakur CK, Negi P, Sreenath K, et al
    Epidemiological, clinical, and laboratory characteristics of human granulocytic anaplasmosis in North India.
    J Clin Microbiol. 2024;62:e0104823.
    >> Share

  309. IYER V, Castro D, Malla B, Panda B, et al
    Culture-independent identification of bloodstream infections from whole blood: prospective evaluation in specimens of known infection status.
    J Clin Microbiol. 2024;62:e0149823.
    >> Share

  310. DESRUISSEAUX C, Broderick C, Lavergne V, Sy K, et al
    Retrospective validation of MetaSystems' deep-learning-based digital microscopy platform with assistance compared to manual fluorescence microscopy for detection of mycobacteria.
    J Clin Microbiol. 2024;62:e0106923.
    >> Share

  311. TRAM TTB, Trieu LPT, Nhat LTH, Thu DDA, et al
    Targeted sequencing from cerebrospinal fluid for rapid identification of drug-resistant tuberculous meningitis.
    J Clin Microbiol. 2024 Mar 11:e0128723. doi: 10.1128/jcm.01287.
    >> Share


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