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Articles published in
PLoS Comput Biol
    November 2025
  1. BANKS CJ, Sanchez A, Stewart V, Bowen K, et al
    Machine learning augmented diagnostic testing to identify sources of variability in test performance.
    PLoS Comput Biol. 2025;21:e1013651.
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    October 2025
  2. TOTH DJA, Khader K, Mitchell C, Samore MH, et al
    Transmission thresholds for the spread of infections in healthcare facilities.
    PLoS Comput Biol. 2025;21:e1013577.
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    September 2025
  3. SHORAKA M, Jean-Baptiste H, Buttaro B, Queisser G, et al
    Using stochastic cellular automata to model and define sufficient conditions for the survival of Enterococcus faecalis biofilms with the pCF10 plasmid under erythromycin treatment.
    PLoS Comput Biol. 2025;21:e1013425.
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  4. WHALER B, Lythe G, Gillard JJ, Laws TR, et al
    Mechanistic within-host mathematical model of inhalational anthrax.
    PLoS Comput Biol. 2025;21:e1013439.
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  5. MAITY B, Banerjee S, Senapati A, Pitchford J, et al
    Coupling plankton and cholera dynamics: Insights into outbreak prediction and practical disease management.
    PLoS Comput Biol. 2025;21:e1013523.
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    August 2025
  6. WANG CA, Love WJ, Jara M, van Vliet AHM, et al
    Risk factors for fluoroquinolone- and macrolide-resistance among swine Campylobacter coli using multi-layered chain graphs.
    PLoS Comput Biol. 2025;21:e1012797.
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    July 2025
  7. KIM J, Sutterlin C, Tan M, Enciso G, et al
    Statistical analysis supports the size control mechanism of Chlamydia development.
    PLoS Comput Biol. 2025;21:e1013227.
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    June 2025
  8. DE ANDRADE HGV, da Silva Rocha E, de Carvalho Monteiro KH, de Morais CM, et al
    On the usage of artificial intelligence in leprosy care: A systematic literature review.
    PLoS Comput Biol. 2025;21:e1012550.
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    May 2025
  9. KRUPINSKY KC, Michael CT, Nanda P, Mattila JT, et al
    Distinguishing multiple roles of T cell and macrophage involvement in determining lymph node fates during Mycobacterium tuberculosis infection.
    PLoS Comput Biol. 2025;21:e1013033.
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    April 2025
  10. GANUSOV VV, Kolloli A, Subbian S
    Correction: Mathematical modeling suggests heterogeneous replication of Mycobacterium tuberculosis in rabbits.
    PLoS Comput Biol. 2025;21:e1013048.
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    March 2025
  11. SHINDE P, Willemsen L, Anderson M, Aoki M, et al
    Putting computational models of immunity to the test-An invited challenge to predict B.pertussis vaccination responses.
    PLoS Comput Biol. 2025;21:e1012927.
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  12. MASISON J, Mendes P
    Mathematical modeling reveals ferritin as the strongest cellular driver of dietary iron transfer block in enterocytes.
    PLoS Comput Biol. 2025;21:e1012374.
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    February 2025
  13. BANHOLZER N, Middelkoop K, Leukes J, Weingartner E, et al
    Estimating Mycobacterium tuberculosis transmission in a South African clinic: Spatiotemporal model based on person movements.
    PLoS Comput Biol. 2025;21:e1012823.
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  14. MARCHI J, Minh CNN, Debarbieux L, Weitz JS, et al
    Multi-strain phage induced clearance of bacterial infections.
    PLoS Comput Biol. 2025;21:e1012793.
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  15. LEE CY, Bonakdar S, Arnold KB
    An in silico framework for the rational design of vaginal probiotic therapy.
    PLoS Comput Biol. 2025;21:e1012064.
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    December 2024
  16. BAUM SE, Pelissari DM, Dockhorn Costa F, Harada LO, et al
    Surveillance for TB drug resistance using routine rapid diagnostic testing data: Methodological development and application in Brazil.
    PLoS Comput Biol. 2024;20:e1012662.
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  17. JAMIESON N, Charalambous C, Schultz DM, Hall I, et al
    The Burr distribution as a model for the delay between key events in an individual's infection history.
    PLoS Comput Biol. 2024;20:e1012041.
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    November 2024
  18. GANUSOV VV, Kolloli A, Subbian S
    Mathematical modeling suggests heterogeneous replication of Mycobacterium tuberculosis in rabbits.
    PLoS Comput Biol. 2024;20:e1012563.
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  19. KONZEN E, Delahay RJ, Hodgson DJ, McDonald RA, et al
    Efficient modelling of infectious diseases in wildlife: A case study of bovine tuberculosis in wild badgers.
    PLoS Comput Biol. 2024;20:e1012592.
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    October 2024
  20. FOX L, Miller WC, Gesink D, Doherty I, et al
    Enhancing insights in sexually transmitted infection mapping: Syphilis in Forsyth County, North Carolina, a case study.
    PLoS Comput Biol. 2024;20:e1012464.
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    September 2024
  21. SYLLA A, Chevillon C, Djidjiou-Demasse R, Seydi O, et al
    Understanding the transmission of bacterial agents of sapronotic diseases using an ecosystem-based approach: A first spatially realistic metacommunity model.
    PLoS Comput Biol. 2024;20:e1012435.
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  22. SHINGLETON J, Mustard D, Dyke S, Williams H, et al
    Backtracking: Improved methods for identifying the source of a deliberate release of Bacillus anthracis from the temporal and spatial distribution of cases.
    PLoS Comput Biol. 2024;20:e1010817.
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    August 2024

  23. Quantitative drug susceptibility testing for Mycobacterium tuberculosis using unassembled sequencing data and machine learning.
    PLoS Comput Biol. 2024;20:e1012260.
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    July 2024
  24. PETRUCCIANI A, Hoerter A, Kotze L, Du Plessis N, et al
    Agent-based model predicts that layered structure and 3D movement work synergistically to reduce bacterial load in 3D in vitro models of tuberculosis granuloma.
    PLoS Comput Biol. 2024;20:e1012266.
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    April 2024
  25. WHEELER J, Rosengart A, Jiang Z, Tan K, et al
    Informing policy via dynamic models: Cholera in Haiti.
    PLoS Comput Biol. 2024;20:e1012032.
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  26. CHALLEN R, Chatzilena A, Qian G, Oben G, et al
    Combined multiplex panel test results are a poor estimate of disease prevalence without adjustment for test error.
    PLoS Comput Biol. 2024;20:e1012062.
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