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Articles published in
J Clin Microbiol
    July 2022
  1. LAI E, Kennedy EB, Lozach J, Hayashibara K, et al
    A Method for Variant Agnostic Detection of SARS-CoV-2, Rapid Monitoring of Circulating Variants, and Early Detection of Emergent Variants Such as Omicron.
    J Clin Microbiol. 2022;60:e0034222.
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  2. FASCHING CL, Servellita V, McKay B, Nagesh V, et al
    COVID-19 Variant Detection with a High-Fidelity CRISPR-Cas12 Enzyme.
    J Clin Microbiol. 2022;60:e0026122.
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  3. ROBINSON ML, Mirza A, Gallagher N, Boudreau A, et al
    Limitations of Molecular and Antigen Test Performance for SARS-CoV-2 in Symptomatic and Asymptomatic COVID-19 Contacts.
    J Clin Microbiol. 2022;60:e0018722.
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  4. GASTON DC, Miller HB, Fissel JA, Jacobs E, et al
    Evaluation of Metagenomic and Targeted Next-Generation Sequencing Workflows for Detection of Respiratory Pathogens from Bronchoalveolar Lavage Fluid Specimens.
    J Clin Microbiol. 2022;60:e0052622.
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  5. WEIDMANN MD, Berry GJ, Zucker JE, Huang S, et al
    Bacterial Pneumonia and Respiratory Culture Utilization among Hospitalized Patients with and without COVID-19 in a New York City Hospital.
    J Clin Microbiol. 2022;60:e0017422.
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  6. LICHTENEGGER S, Saiger S, Hardt M, Kulnik S, et al
    Development of a Rapid Live SARS-CoV-2 Neutralization Assay Based on a qPCR Readout.
    J Clin Microbiol. 2022;60:e0037622.
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  7. DOERN CD, Miller MB, Alby K, Bachman MA, et al
    Proceedings of the Clinical Microbiology Open 2018 and 2019 - a Discussion about Emerging Trends, Challenges, and the Future of Clinical Microbiology.
    J Clin Microbiol. 2022;60:e0009222.
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    June 2022
  8. RODINO KG, Peaper DR, Kelly BJ, Bushman F, et al
    Partial ORF1ab Gene Target Failure with Omicron BA.2.12.1.
    J Clin Microbiol. 2022;60:e0060022.
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  9. DESCHERMEIER C, Ehmen C, von Possel R, Murawski C, et al
    Fcgamma-Receptor-Based Enzyme-Linked Immunosorbent Assays for Sensitive, Specific, and Persistent Detection of Anti-SARS-CoV-2 Nucleocapsid Protein IgG Antibodies in Human Sera.
    J Clin Microbiol. 2022;60:e0007522.
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  10. MISRA A, Theel ES
    Immunity to SARS-CoV-2: What Do We Know and Should We Be Testing for It?
    J Clin Microbiol. 2022;60:e0048221.
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    May 2022
  11. YEUNG PS, Wang H, Sibai M, Solis D, et al
    Evaluation of a Rapid and Accessible Reverse Transcription-Quantitative PCR Approach for SARS-CoV-2 Variant of Concern Identification.
    J Clin Microbiol. 2022;60:e0017822.
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  12. STANLEY S, Hamel DJ, Wolf ID, Riedel S, et al
    Limit of Detection for Rapid Antigen Testing of the SARS-CoV-2 Omicron and Delta Variants of Concern Using Live-Virus Culture.
    J Clin Microbiol. 2022;60:e0014022.
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  13. BERRY GJ, Zhen W, Smith E, Manji R, et al
    Multicenter Evaluation of the BioFire Respiratory Panel 2.1 (RP2.1) for Detection of SARS-CoV-2 in Nasopharyngeal Swab Samples.
    J Clin Microbiol. 2022;60:e0006622.
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    April 2022
  14. ASHFORD F, Best A, Dunn SJ, Ahmed Z, et al
    SARS-CoV-2 Testing in the Community: Testing Positive Samples with the TaqMan SARS-CoV-2 Mutation Panel To Find Variants in Real Time.
    J Clin Microbiol. 2022;60:e0240821.
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  15. LAITMAN AM, Lieberman JA, Hoffman NG, Roychoudhury P, et al
    The SARS-CoV-2 Omicron Variant Does Not Have Higher Nasal Viral Loads Compared to the Delta Variant in Symptomatic and Asymptomatic Individuals.
    J Clin Microbiol. 2022;60:e0013922.
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  16. CHEN Y, Han Y, Yang J, Ma Y, et al
    Impact of SARS-CoV-2 Variants on the Analytical Sensitivity of rRT-PCR Assays.
    J Clin Microbiol. 2022;60:e0237421.
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  17. RATCLIFF J, Al-Beidh F, Bibi S, Bonsall D, et al
    Highly Sensitive Lineage Discrimination of SARS-CoV-2 Variants through Allele-Specific Probe PCR.
    J Clin Microbiol. 2022;60:e0228321.
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  18. CHOI H, Hwang M, Navarathna DH, Xu J, et al
    Performance of COVIDSeq and Swift Normalase Amplicon SARS-CoV-2 Panels for SARS-CoV-2 Genome Sequencing: Practical Guide and Combining FASTQ Strategy.
    J Clin Microbiol. 2022;60:e0002522.
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  19. FISSEL JA, Mestas J, Chen PY, Flores-Vazquez J, et al
    Implementation of a Streamlined SARS-CoV-2 Whole-Genome Sequencing Assay for Expeditious Surveillance during the Emergence of the Omicron Variant.
    J Clin Microbiol. 2022;60:e0256921.
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  20. SMITH BF, Graven PF, Yang DY, Downs SM, et al
    Using Spike Gene Target Failure to Estimate Growth Rate of the Alpha and Omicron Variants of SARS-CoV-2.
    J Clin Microbiol. 2022;60:e0257321.
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    March 2022
  21. GIACOBBE DR, Prattes J, Wauters J, Dettori S, et al
    Prognostic Impact of Bronchoalveolar Lavage Fluid Galactomannan and Aspergillus Culture Results on Survival in COVID-19 Intensive Care Unit Patients: a Post Hoc Analysis from the European Confederation of Medical Mycology (ECMM) COVID-19-Associated Pu
    J Clin Microbiol. 2022 Mar 24:e0229821. doi: 10.1128/jcm.02298.
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  22. MCADAM AJ
    Clinical Laboratory Budgets during the COVID-19 Pandemic: a Micro-Comic Strip.
    J Clin Microbiol. 2022;60:e0009622.
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  23. PHAN T, Boes S, McCullough M, Gribschaw J, et al
    Development of a One-Step Qualitative RT-PCR Assay to Detect the SARS-CoV-2 Omicron (B.1.1.529) Variant in Respiratory Specimens.
    J Clin Microbiol. 2022;60:e0002422.
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  24. BECK EJ, Hsieh YH, Fernandez RE, Dashler G, et al
    Differentiation of Individuals Previously Infected with and Vaccinated for SARS-CoV-2 in an Inner-City Emergency Department.
    J Clin Microbiol. 2022;60:e0239021.
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  25. BARREIRO P, Sanz JC, San Roman J, Perez-Abeledo M, et al
    A Pilot Study for the Evaluation of an Interferon Gamma Release Assay (IGRA) To Measure T-Cell Immune Responses after SARS-CoV-2 Infection or Vaccination in a Unique Cloistered Cohort.
    J Clin Microbiol. 2022;60:e0219921.
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  26. WANG J, Hawken SE, Jones CD, Hagan RS, et al
    Collaboration between Clinical and Academic Laboratories for Sequencing SARS-CoV-2 Genomes.
    J Clin Microbiol. 2022;60:e0128821.
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    February 2022
  27. DEERAIN J, Druce J, Tran T, Batty M, et al
    Assessment of the Analytical Sensitivity of 10 Lateral Flow Devices against the SARS-CoV-2 Omicron Variant.
    J Clin Microbiol. 2022;60:e0247921.
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  28. SAVELA ES, Viloria Winnett A, Romano AE, Porter MK, et al
    Quantitative SARS-CoV-2 Viral-Load Curves in Paired Saliva Samples and Nasal Swabs Inform Appropriate Respiratory Sampling Site and Analytical Test Sensitivity Required for Earliest Viral Detection.
    J Clin Microbiol. 2022;60:e0178521.
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  29. NAKAGAMA Y, Nitahara Y, Kaku N, Tshibangu-Kabamba E, et al
    A Dual-Antigen SARS-CoV-2 Serological Assay Reflects Antibody Avidity.
    J Clin Microbiol. 2022;60:e0226221.
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  30. KOTNIK JH, Cooper S, Smedinghoff S, Gade P, et al
    Flu@home: The comparative accuracy of an at-home influenza rapid diagnostic test, using a pre-positioned test kit, mobile app, mail-in reference sample, and symptom-based testing trigger.
    J Clin Microbiol. 2022 Feb 2:JCM0207021. doi: 10.1128/JCM.02070.
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    January 2022
  31. WEGNER F, Roloff T, Huber M, Cordey S, et al
    External Quality Assessment of SARS-CoV-2 Sequencing: an ESGMD-SSM Pilot Trial across 15 European Laboratories.
    J Clin Microbiol. 2022;60:e0169821.
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  32. GRENINGER AL, Dien Bard J, Colgrove RC, Graf EH, et al
    Clinical and Infection Prevention Applications of Severe Acute Respiratory Syndrome Coronavirus 2 Genotyping: an Infectious Diseases Society of America/American Society for Microbiology Consensus Review Document.
    J Clin Microbiol. 2022;60:e0165921.
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  33. SAKER K, Escuret V, Pitiot V, Massardier-Pilonchery A, et al
    Evaluation of Commercial Anti-SARS-CoV-2 Antibody Assays and Comparison of Standardized Titers in Vaccinated Health Care Workers.
    J Clin Microbiol. 2022;60:e0174621.
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  34. ALMENDARES O, Prince-Guerra JL, Nolen LD, Gunn JKL, et al
    Performance Characteristics of the Abbott BinaxNOW SARS-CoV-2 Antigen Test in Comparison to Real-Time Reverse Transcriptase PCR and Viral Culture in Community Testing Sites during November 2020.
    J Clin Microbiol. 2022;60:e0174221.
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  35. SANTOS BRAVO M, Berengua C, Marin P, Esteban M, et al
    Viral Culture Confirmed SARS-CoV-2 Subgenomic RNA Value as a Good Surrogate Marker of Infectivity.
    J Clin Microbiol. 2022;60:e0160921.
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  36. YANSOUNI CP, Papenburg J, Cheng MP, Corsini R, et al
    Specificity of SARS-CoV-2 Antibody Detection Assays against S and N Proteins among Pre-COVID-19 Sera from Patients with Protozoan and Helminth Parasitic Infections.
    J Clin Microbiol. 2022;60:e0171721.
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  37. DELLIERE S, Dudoignon E, Voicu S, Collet M, et al
    Combination of mycological criteria: a better surrogate to identify COVID-19 associated pulmonary aspergillosis patients and evaluate prognosis?
    J Clin Microbiol. 2022 Jan 5:JCM0216921. doi: 10.1128/JCM.02169.
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    December 2021
  38. YANG T, Kessler LG, Thompson MJ, Lutz BR, et al
    Requirements and study designs for US regulatory approval of influenza home tests.
    J Clin Microbiol. 2021 Dec 15:JCM0188421. doi: 10.1128/JCM.01884.
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    November 2021
  39. JEONG S, Lee N, Lee SK, Cho EJ, et al
    Comparison of the Results of Five SARS-CoV-2 Antibody Assays before and after the First and Second ChAdOx1 nCoV-19 Vaccinations among Health Care Workers: a Prospective Multicenter Study.
    J Clin Microbiol. 2021;59:e0178821.
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  40. YANSON K, Laviers W, Neely L, Lockamy E, et al
    Performance Evaluation of the BD SARS-CoV-2 Reagents for the BD MAX System.
    J Clin Microbiol. 2021;59:e0101921.
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  41. ARMSTRONG DT, Tacheny EA, Olinger G, Howard R, et al
    SARS-CoV-2 Supply Shortages and Tuberculosis Diagnostics: Current Issues Requiring Immediate Solutions.
    J Clin Microbiol. 2021;59:e0077821.
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  42. GRAF EH
    Finding the Middle Ground with the Clinical Laboratory's Role in SARS-CoV-2 Genomic Surveillance.
    J Clin Microbiol. 2021;59:e0181621.
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  43. PLITNICK J, Griesemer S, Lasek-Nesselquist E, Singh N, et al
    Whole-Genome Sequencing of SARS-CoV-2: Assessment of the Ion Torrent AmpliSeq Panel and Comparison with the Illumina MiSeq ARTIC Protocol.
    J Clin Microbiol. 2021;59:e0064921.
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  44. STOKES NL, Reed KA, Berbari EF, Vetter S, et al
    Evaluation of the BinaxNOW COVID-19 Rapid Antigen Test in an Asymptomatic Patient Population Undergoing Preprocedural Screening.
    J Clin Microbiol. 2021;59:e0165021.
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  45. LEUZINGER K, Osthoff M, Drager S, Pargger H, et al
    Comparing Immunoassays for SARS-CoV-2 Antibody Detection in Patients with and without Laboratory-Confirmed SARS-CoV-2 Infection.
    J Clin Microbiol. 2021;59:e0138121.
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  46. TROBAJO-SANMARTIN C, Miqueleiz A, Portillo ME, Fernandez-Huerta M, et al
    Emergence of SARS-CoV-2 Variant B.1.575.2, Containing the E484K Mutation in the Spike Protein, in Pamplona, Spain, May to June 2021.
    J Clin Microbiol. 2021;59:e0173621.
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  47. KRUSE RL, Huang Y, Lee A, Zhu X, et al
    A Hemagglutination-Based Semiquantitative Test for Point-of-Care Determination of SARS-CoV-2 Antibody Levels.
    J Clin Microbiol. 2021;59:e0118621.
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  48. BABIKER A, Immergluck K, Stampfer SD, Rao A, et al
    Single-Amplicon Multiplex Real-Time Reverse Transcription-PCR with Tiled Probes To Detect SARS-CoV-2 spike Mutations Associated with Variants of Concern.
    J Clin Microbiol. 2021;59:e0144621.
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    October 2021
  49. SEXTON ME, Kraft CS
    Routine Antigen Testing Is Not a Substitute for Health Care Worker Vaccination against SARS-CoV-2.
    J Clin Microbiol. 2021;59:e0156421.
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  50. TCHESNOKOVA V, Kulasekara H, Larson L, Bowers V, et al
    Acquisition of the L452R Mutation in the ACE2-Binding Interface of Spike Protein Triggers Recent Massive Expansion of SARS-CoV-2 Variants.
    J Clin Microbiol. 2021;59:e0092121.
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  51. PEGHIN M, De Martino M, Fabris M, Palese A, et al
    The Fall in Antibody Response to SARS-CoV-2: a Longitudinal Study of Asymptomatic to Critically Ill Patients Up to 10 Months after Recovery.
    J Clin Microbiol. 2021;59:e0113821.
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  52. LAM C, Gray K, Gall M, Sadsad R, et al
    SARS-CoV-2 Genome Sequencing Methods Differ in Their Abilities To Detect Variants from Low-Viral-Load Samples.
    J Clin Microbiol. 2021;59:e0104621.
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  53. BINNICKER MJ
    Can Testing Predict SARS-CoV-2 Infectivity? The Potential for Certain Methods To Be Surrogates for Replication-Competent Virus.
    J Clin Microbiol. 2021;59:e0046921.
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  54. KANJI JN, Proctor DT, Stokes W, Berenger BM, et al
    Multicenter Postimplementation Assessment of the Positive Predictive Value of SARS-CoV-2 Antigen-Based Point-of-Care Tests Used for Screening of Asymptomatic Continuing Care Staff.
    J Clin Microbiol. 2021;59:e0141121.
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  55. KERSH EN, Shukla M, Raphael BH, Habel M, et al
    At-Home Specimen Self-Collection and Self-Testing for Sexually Transmitted Infection Screening Demand Accelerated by the COVID-19 Pandemic: a Review of Laboratory Implementation Issues.
    J Clin Microbiol. 2021;59:e0264620.
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  56. AUTIER B, Prattes J, White PL, Valerio M, et al
    Aspergillus Lateral Flow Assay with Digital Reader for the Diagnosis of COVID-19 Associated Pulmonary Aspergillosis (CAPA): A multicenter study.
    J Clin Microbiol. 2021 Oct 13:JCM0168921. doi: 10.1128/JCM.01689.
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    September 2021
  57. ARNAOUT RA
    Cooperation under Pressure: Lessons from the COVID-19 Swab Crisis.
    J Clin Microbiol. 2021;59:e0123921.
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  58. SHIER KL
    Elevated Rates of Indeterminate Results on QuantiFERON-TB Gold Plus in COVID-19 Patients.
    J Clin Microbiol. 2021;59:e0141421.
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  59. ALLAN-BLITZ LT, Klausner JD
    A Real-World Comparison of SARS-CoV-2 Rapid Antigen Testing versus PCR Testing in Florida.
    J Clin Microbiol. 2021;59:e0110721.
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  60. BLACKALL D, Moreno R, Jin J, Plotinsky R, et al
    Performance Characteristics of the Roche Diagnostics cobas Liat PCR System as a COVID-19 Screening Tool for Hospital Admissions in a Regional Health Care Delivery System.
    J Clin Microbiol. 2021;59:e0127821.
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  61. JACOT D, Pillonel T, Greub G, Bertelli C, et al
    Assessment of SARS-CoV-2 Genome Sequencing: Quality Criteria and Low-Frequency Variants.
    J Clin Microbiol. 2021;59:e0094421.
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  62. BANADA P, Green R, Banik S, Chopoorian A, et al
    A Simple Reverse Transcriptase PCR Melting-Temperature Assay To Rapidly Screen for Widely Circulating SARS-CoV-2 Variants.
    J Clin Microbiol. 2021;59:e0084521.
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  63. SHOLUKH AM, Fiore-Gartland A, Ford ES, Miner MD, et al
    Evaluation of Cell-Based and Surrogate SARS-CoV-2 Neutralization Assays.
    J Clin Microbiol. 2021;59:e0052721.
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  64. PEAPER DR, Rhoads DD, Sullivan KV, Couturier MR, et al
    Considerations from the College of American Pathologists for Implementation of an Assay for SARS-CoV-2 Testing after a Change in Regulatory Status.
    J Clin Microbiol. 2021;59:e0116721.
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  65. THUDIUM RF, Stoico MP, Hogdall E, Hogh J, et al
    Early Laboratory Diagnosis of COVID-19 by Antigen Detection in Blood Samples of the SARS-CoV-2 Nucleocapsid Protein.
    J Clin Microbiol. 2021;59:e0100121.
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  66. WARD JD, Cornaby C, Schmitz JL
    Indeterminate QuantiFERON Gold Plus Results Reveal Deficient Interferon Gamma Responses in Severely Ill COVID-19 Patients.
    J Clin Microbiol. 2021;59:e0081121.
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  67. VALINETZ ED, Cangelosi GA
    A Look Inside: Oral Sampling for Detection of Non-oral Infectious Diseases.
    J Clin Microbiol. 2021;59:e0236020.
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  68. ERGUN M, Bruggemann RJM, Alanio A, Delliere S, et al
    Aspergillus test profiles and mortality in critically-ill COVID-19 patients.
    J Clin Microbiol. 2021 Sep 8:JCM0122921. doi: 10.1128/JCM.01229.
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    August 2021
  69. LIU BM, Beck EM, Fisher MA
    The Brief Case: Ventilator-Associated Corynebacterium accolens Pneumonia in a Patient with Respiratory Failure Due to COVID-19.
    J Clin Microbiol. 2021;59:e0013721.
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  70. LIU BM, Beck EM, Fisher MA
    Closing the Brief Case: Ventilator-Associated Corynebacterium accolens Pneumonia in a Patient with Respiratory Failure Due to COVID-19.
    J Clin Microbiol. 2021;59:e0013821.
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  71. ENGLISH E, Cook LE, Piec I, Dervisevic S, et al
    Performance of the Abbott SARS-CoV-2 IgG II Quantitative Antibody Assay Including the New Variants of Concern, VOC 202012/V1 (United Kingdom) and VOC 202012/V2 (South Africa), and First Steps towards Global Harmonization of COVID-19 Antibody Methods.
    J Clin Microbiol. 2021;59:e0028821.
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  72. KORENKOV M, Poopalasingam N, Madler M, Vanshylla K, et al
    Evaluation of a Rapid Antigen Test To Detect SARS-CoV-2 Infection and Identify Potentially Infectious Individuals.
    J Clin Microbiol. 2021;59:e0089621.
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  73. POLLOCK NR, Berlin D, Smole SC, Madoff LC, et al
    Implementation of SARS-CoV2 Screening in K-12 Schools Using In-School Pooled Molecular Testing and Deconvolution by Rapid Antigen Test.
    J Clin Microbiol. 2021;59:e0112321.
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  74. VAN DEN BELD MJC, Murk JL, Kluytmans J, Koopmans MPG, et al
    Increasing the Efficiency of a National Laboratory Response to COVID-19: a Nationwide Multicenter Evaluation of 47 Commercial SARS-CoV-2 Immunoassays by 41 Laboratories.
    J Clin Microbiol. 2021;59:e0076721.
    >> Share

  75. JEONG S, Lee N, Lee SK, Cho EJ, et al
    Comparing Results of Five SARS-CoV-2 Antibody Assays Before and After the First Dose of ChAdOx1 nCoV-19 Vaccine among Health Care Workers.
    J Clin Microbiol. 2021;59:e0110521.
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  76. WHITE PL, Price JS, Backx M
    Evaluation of the Performance of the Associates of Cape Cod STAT Assay for the Diagnosis of Invasive Fungal Disease in Critical-Care Patients with COVID-19.
    J Clin Microbiol. 2021;59:e0086921.
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  77. AST V, Costina V, Eichner R, Bode A, et al
    Assessing the Quality of Serological Testing in the COVID-19 Pandemic: Results of a European External Quality Assessment (EQA) Scheme for Anti-SARS-CoV-2 Antibody Detection.
    J Clin Microbiol. 2021;59:e0055921.
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  78. L'HUILLIER AG, Lacour M, Sadiku D, Gadiri MA, et al
    Diagnostic Accuracy of SARS-CoV-2 Rapid Antigen Detection Testing in Symptomatic and Asymptomatic Children in the Clinical Setting.
    J Clin Microbiol. 2021;59:e0099121.
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  79. THEEL ES, Johnson PW, Kunze KL, Wu L, et al
    SARS-CoV-2 Serologic Assays Dependent on Dual-Antigen Binding Demonstrate Diverging Kinetics Relative to Other Antibody Detection Methods.
    J Clin Microbiol. 2021;59:e0123121.
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  80. BRADLEY BT, Bryan A, Fink SL, Goecker EA, et al
    Anti-SARS-CoV-2 Antibody Levels Measured by the AdviseDx SARS-CoV-2 Assay Are Concordant with Previously Available Serologic Assays but Are Not Fully Predictive of Sterilizing Immunity.
    J Clin Microbiol. 2021;59:e0098921.
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  81. BOERGER AC, Buckwalter S, Fernholz EC, Jannetto PJ, et al
    Evaluation of Self-Collected Midturbinate Nasal Swabs and Saliva for Detection of SARS-CoV-2 RNA.
    J Clin Microbiol. 2021;59:e0084821.
    >> Share

  82. CALLAHAN C, Lee RA, Lee GR, Zulauf K, et al
    Nasal Swab Performance by Collection Timing, Procedure, and Method of Transport for Patients with SARS-CoV-2.
    J Clin Microbiol. 2021;59:e0056921.
    >> Share

    July 2021
  83. ZHANG SX, Balada-Llasat JM, Pancholi P, Sullivan KV, et al
    COVID-associated pulmonary aspergillosis in the US: is it rare or have we missed the diagnosis?
    J Clin Microbiol. 2021 Jul 21:JCM0113521. doi: 10.1128/JCM.01135.
    >> Share

  84. NIELSEN MC, Reynoso D, Ren P
    Closing the Brief Case: A Fatal Case of SARS-CoV-2 Coinfection with Coccidioides in Texas-Another Challenge We Face.
    J Clin Microbiol. 2021;59:e0016421.
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  85. NIELSEN MC, Reynoso D, Ren P
    The Brief Case: A Fatal Case of SARS-CoV-2 Coinfection with Coccidioides in Texas-Another Challenge We Face.
    J Clin Microbiol. 2021;59:e0016321.
    >> Share

  86. WANG H, Miller JA, Verghese M, Sibai M, et al
    Multiplex SARS-CoV-2 Genotyping Reverse Transcriptase PCR for Population-Level Variant Screening and Epidemiologic Surveillance.
    J Clin Microbiol. 2021;59:e0085921.
    >> Share

  87. WANG H, Jean S, Eltringham R, Madison J, et al
    Mutation-Specific SARS-CoV-2 PCR Screen: Rapid and Accurate Detection of Variants of Concern and the Identification of a Newly Emerging Variant with Spike L452R Mutation.
    J Clin Microbiol. 2021;59:e0092621.
    >> Share

  88. CHANDLER CM, Bourassa L, Mathias PC, Greninger AL, et al
    Estimating the False-Positive Rate of Highly Automated SARS-CoV-2 Nucleic Acid Amplification Testing.
    J Clin Microbiol. 2021;59:e0108021.
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  89. RHOADS DD, Plunkett D, Nakitandwe J, Dempsey A, et al
    Endemic SARS-CoV-2 Polymorphisms Can Cause a Higher Diagnostic Target Failure Rate than Estimated by Aggregate Global Sequencing Data.
    J Clin Microbiol. 2021;59:e0091321.
    >> Share

  90. KRONE M, Gutling J, Wagener J, Lam TT, et al
    Performance of Three SARS-CoV-2 Immunoassays, Three Rapid Lateral Flow Tests, and a Novel Bead-Based Affinity Surrogate Test for the Detection of SARS-CoV-2 Antibodies in Human Serum.
    J Clin Microbiol. 2021;59:e0031921.
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  91. JIA HL, Li P, Liu HJ, Zhong JY, et al
    Genomic Elucidation of a COVID-19 Resurgence and Local Transmission of SARS-CoV-2 in Guangzhou, China.
    J Clin Microbiol. 2021;59:e0007921.
    >> Share

    June 2021
  92. MONTGOMERY TL, Paavola M, Bruce EA, Botten JW, et al
    Laboratory Worker Self-Contamination with Noninfectious SARS-CoV-2 DNA Can Result in False-Positive Reverse Transcriptase PCR-Based Surveillance Testing.
    J Clin Microbiol. 2021;59:e0072321.
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  93. VERGHESE M, Jiang B, Iwai N, Mar M, et al
    A SARS-CoV-2 Variant with L452R and E484Q Neutralization Resistance Mutations.
    J Clin Microbiol. 2021;59:e0074121.
    >> Share

  94. MURAD D, Chandrasekaran S, Pillai A, Garner OB, et al
    SARS-CoV-2 Infection Detection by PCR and Serologic Testing in Clinical Practice.
    J Clin Microbiol. 2021;59:e0043121.
    >> Share

  95. TAHAN S, Parikh BA, Droit L, Wallace MA, et al
    SARS-CoV-2 E Gene Variant Alters Analytical Sensitivity Characteristics of Viral Detection Using a Commercial Reverse Transcription-PCR Assay.
    J Clin Microbiol. 2021;59:e0007521.
    >> Share

  96. BAKER OR, Grabowski MK, Galiwango RM, Nalumansi A, et al
    Differential Performance of CoronaCHEK SARS-CoV-2 Lateral Flow Antibody Assay by Geographic Origin of Samples.
    J Clin Microbiol. 2021;59:e0083721.
    >> Share

  97. STEINHARDT LC, Ige F, Iriemenam NC, Greby SM, et al
    Cross-Reactivity of Two SARS-CoV-2 Serological Assays in a Setting Where Malaria Is Endemic.
    J Clin Microbiol. 2021;59:e0051421.
    >> Share

  98. LEFEVER S, Indevuyst C, Cuypers L, Dewaele K, et al
    Comparison of the Quantitative DiaSorin Liaison Antigen Test to Reverse Transcription-PCR for the Diagnosis of COVID-19 in Symptomatic and Asymptomatic Outpatients.
    J Clin Microbiol. 2021;59:e0037421.
    >> Share

  99. BULTERYS PL, Leung NY, Saleem A, Budvytiene I, et al
    Impact of COVID-19 Shelter-in-Place Order on Transmission of Gastrointestinal Pathogens in Northern California.
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  100. NARASIMHAN M, Mahimainathan L, Araj E, Clark AE, et al
    Clinical Evaluation of the Abbott Alinity SARS-CoV-2 Spike-Specific Quantitative IgG and IgM Assays among Infected, Recovered, and Vaccinated Groups.
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  101. LUO YR, Yun C, Chakraborty I, Wu AHB, et al
    A SARS-CoV-2 Label-Free Surrogate Virus Neutralization Test and a Longitudinal Study of Antibody Characteristics in COVID-19 Patients.
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    May 2021
  102. SCHULTZ JS, McCarthy MK, Rester C, Sabourin KR, et al
    Development and Validation of a Multiplex Microsphere Immunoassay Using Dried Blood Spots for SARS-CoV-2 Seroprevalence: Application in First Responders in Colorado, USA.
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  103. PETO L, Rodger G, Carter DP, Osman KL, et al
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  104. FAVRESSE J, Douxfils J
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  105. ALOUANI DJ, Rajapaksha RRP, Jani M, Rhoads DD, et al
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  106. GOVENDER KN
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    April 2021
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  108. ZOWAWI HM, Alenazi TH, AlOmaim WS, Wazzan A, et al
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  109. GRIESEMER SB, Van Slyke G, Ehrbar D, Strle K, et al
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  110. LI T, Chung HK, Pireku PK, Beitzel BF, et al
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  111. POLLOCK NR, Jacobs JR, Tran K, Cranston AE, et al
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  112. SEMMLER G, Traugott MT, Graninger M, Hoepler W, et al
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  113. RICHARD-GREENBLATT M, Comar CE, Flevaud L, Berti M, et al
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  114. HARRITSHOJ LH, Gybel-Brask M, Afzal S, Kamstrup PR, et al
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  115. HIRSCHHORN JW, Kegl A, Dickerson T, Glen WB Jr, et al
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  116. LEE RA, Herigon JC, Benedetti A, Pollock NR, et al
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  117. LI D, Li J
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  118. LOCHER K, Velapatino B, Caza M, Li L, et al
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  119. KIM AE, Brandstetter E, Wilcox N, Heimonen J, et al
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    March 2021
  120. GOLDFARB DM, Tilley P, Al-Rawahi GN, Srigley JA, et al
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  121. OKOYE NC, Barker AP, Curtis K, Orlandi RR, et al
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  122. MORE S, Narayanan S, Patil G, Ghosh P, et al
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  123. KLAUSNER JD, Kojima N, Butler-Wu SM
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  124. TAYLOR SC, Hurst B, Charlton CL, Bailey A, et al
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  125. HIGGINS V, Fabros A, Kulasingam V
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  126. MAZER BL
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  127. RAUCH JN, Valois E, Solley SC, Braig F, et al
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  128. HASAN MR, Sundararaju S, Manickam C, Mirza F, et al
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  129. GRIESEMER SB, Van Slyke G, St George K
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  130. VERKERKE H, Horwath M, Saeedi B, Boyer D, et al
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  131. POLLOCK NR, Savage TJ, Wardell H, Lee RA, et al
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  132. FERNANDEZ-GONZALEZ M, Agullo V, de la Rica A, Infante A, et al
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  133. RENARD N, Daniel S, Cayet N, Pecquet M, et al
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  134. BABIKER A, Marvil CE, Waggoner JJ, Collins MH, et al
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  135. PONCE-ROJAS JC, Costello MS, Proctor DA, Kosik KS, et al
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    February 2021
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  137. THERRIEN C, Serhir B, Belanger-Collard M, Skrzypczak J, et al
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  138. MOSTAFA HH, Carroll KC, Hicken R, Berry GJ, et al
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  139. FISCHER C, Mogling R, Melidou A, Kuhne A, et al
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  140. BARAT B, Das S, De Giorgi V, Henderson DK, et al
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    January 2021
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  142. DORTET L, Ronat JB, Vauloup-Fellous C, Langendorf C, et al
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  143. YEE R, Truong TT, Pannaraj PS, Eubanks N, et al
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  144. RODRIGUEZ-GRANDE C, Adan-Jimenez J, Catalan P, Alcala L, et al
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  145. BECK ET, Paar W, Fojut L, Serwe J, et al
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  146. MACMULLAN MA, Chellamuthu P, Mades A, Das S, et al
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  147. PLEBANI M, Parcina M, Bechri I, Zehender G, et al
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  148. CONKLIN SE, Martin K, Manabe YC, Schmidt HA, et al
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  149. CAMERON A, Pecora ND, Pettengill MA
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  152. PERERA RAPM, Ko R, Tsang OTY, Hui DSC, et al
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  153. FENOLLAR F, Bouam A, Ballouche M, Fuster L, et al
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  154. PATEL EU, Bloch EM, Clarke W, Hsieh YH, et al
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  155. DOBANO C, Vidal M, Santano R, Jimenez A, et al
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  156. LEUNG EC, Chow VC, Lee MK, Tang KP, et al
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    December 2020
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  158. KOCIOLEK LK, Muller WJ, Yee R, Dien Bard J, et al
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  159. SHAKIR SM, Barker AP, Hillyard DR, Gilmore N, et al
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  160. VANAERSCHOT M, Mann SA, Webber JT, Kamm J, et al
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  162. PISANIC N, Randad PR, Kruczynski K, Manabe YC, et al
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  163. ASSENNATO SM, Ritchie AV, Nadala C, Goel N, et al
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  164. ADDETIA A, Lin MJ, Peddu V, Roychoudhury P, et al
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  165. YOUNG S, Taylor SN, Cammarata CL, Varnado KG, et al
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  166. SCHUETZ AN, Hemarajata P, Mehta N, Campbell S, et al
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  167. TURBETT SE, Anahtar M, Dighe AS, Garcia Beltran W, et al
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  169. YUSUF E, Vonk A, van den Akker JPC, Bode L, et al
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    November 2020
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  171. LUCHSINGER LL, Ransegnola BP, Jin DK, Muecksch F, et al
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    October 2020
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  173. PRINCE HE, Givens TS, Lape-Nixon M, Clarke NJ, et al
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  174. PROCOP GW, Shrestha NK, Vogel S, Van Sickle K, et al
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  175. WALKER SN, Chokkalingam N, Reuschel EL, Purwar M, et al
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  176. BOUKLI N, Le Mene M, Schnuriger A, Cuervo NS, et al
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  177. PETTENGILL MA, McAdam AJ
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  178. WELCH SR, Davies KA, Buczkowski H, Hettiarachchi N, et al
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  179. ADDETIA A, Crawford KHD, Dingens A, Zhu H, et al
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  180. HANSON KE, Barker AP, Hillyard DR, Gilmore N, et al
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  181. ALGHOUNAIM M, Almazeedi S, Al Youha S, Papenburg J, et al
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  183. BORMAN AM, Palmer MD, Fraser M, Patterson Z, et al
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    September 2020
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  185. HERNANDEZ S, Munoz-Almagro C, Ciruela P, Soldevila N, et al
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  186. ZHAO S, Schuurman N, Tieke M, Quist B, et al
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    August 2020
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  189. NAGURA-IKEDA M, Imai K, Tabata S, Miyoshi K, et al
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  191. BONELLI F, Sarasini A, Zierold C, Calleri M, et al
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    July 2020
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  195. MCADAM AJ
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  208. HOU H, Chen J, Wang Y, Lu Y, et al
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    Preprocedural Surveillance Testing for SARS-CoV-2 in an Asymptomatic Population in the Seattle Region Shows Low Rates of Positivity.
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  210. CHEN JH, Yip CC, Chan JF, Poon RW, et al
    Clinical Performance of the Luminex NxTAG CoV Extended Panel for SARS-CoV-2 Detection in Nasopharyngeal Specimens from COVID-19 Patients in Hong Kong.
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  211. BASU A, Zinger T, Inglima K, Woo KM, et al
    Performance of Abbott ID Now COVID-19 Rapid Nucleic Acid Amplification Test Using Nasopharyngeal Swabs Transported in Viral Transport Media and Dry Nasal Swabs in a New York City Academic Institution.
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  212. MOORE NM, Li H, Schejbal D, Lindsley J, et al
    Comparison of Two Commercial Molecular Tests and a Laboratory-Developed Modification of the CDC 2019-nCoV Reverse Transcriptase PCR Assay for the Detection of SARS-CoV-2.
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  213. HOGAN CA, Garamani N, Lee AS, Tung JK, et al
    Comparison of the Accula SARS-CoV-2 Test with a Laboratory-Developed Assay for Detection of SARS-CoV-2 RNA in Clinical Nasopharyngeal Specimens.
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  214. BRODER K, Babiker A, Myers C, White T, et al
    Test Agreement between Roche Cobas 6800 and Cepheid GeneXpert Xpress SARS-CoV-2 Assays at High Cycle Threshold Ranges.
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  215. MCCORMICK-BAW C, Morgan K, Gaffney D, Cazares Y, et al
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  216. SEPULVEDA J, Westblade LF, Whittier S, Satlin MJ, et al
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  217. SMITH KP, Cheng A, Chopelas A, DuBois-Coyne S, et al
    Large-Scale, In-House Production of Viral Transport Media To Support SARS-CoV-2 PCR Testing in a Multihospital Health Care Network during the COVID-19 Pandemic.
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  218. LAMBERT-NICLOT S, Cuffel A, Le Pape S, Vauloup-Fellous C, et al
    Evaluation of a Rapid Diagnostic Assay for Detection of SARS-CoV-2 Antigen in Nasopharyngeal Swabs.
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  219. CALLAHAN CJ, Lee R, Zulauf KE, Tamburello L, et al
    Open Development and Clinical Validation of Multiple 3D-Printed Nasopharyngeal Collection Swabs: Rapid Resolution of a Critical COVID-19 Testing Bottleneck.
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  220. CRANEY AR, Velu PD, Satlin MJ, Fauntleroy KA, et al
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  221. MITCHELL SL, St George K, Rhoads DD, Butler-Wu SM, et al
    Understanding, Verifying, and Implementing Emergency Use Authorization Molecular Diagnostics for the Detection of SARS-CoV-2 RNA.
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  222. BRYAN A, Pepper G, Wener MH, Fink SL, et al
    Performance Characteristics of the Abbott Architect SARS-CoV-2 IgG Assay and Seroprevalence in Boise, Idaho.
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  223. LOEFFELHOLZ MJ, Alland D, Butler-Wu SM, Pandey U, et al
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  224. LIEBERMAN JA, Pepper G, Naccache SN, Huang ML, et al
    Comparison of Commercially Available and Laboratory-Developed Assays for In Vitro Detection of SARS-CoV-2 in Clinical Laboratories.
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  225. THEEL ES, Slev P, Wheeler S, Couturier MR, et al
    The Role of Antibody Testing for SARS-CoV-2: Is There One?
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  226. ZHEN W, Manji R, Smith E, Berry GJ, et al
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  227. VISSEAUX B, Le Hingrat Q, Collin G, Bouzid D, et al
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  228. ROGERS AA, Baumann RE, Borillo GA, Kagan RM, et al
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  229. ZHEN W, Smith E, Manji R, Schron D, et al
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  230. HARRINGTON A, Cox B, Snowdon J, Bakst J, et al
    Comparison of Abbott ID Now and Abbott m2000 Methods for the Detection of SARS-CoV-2 from Nasopharyngeal and Nasal Swabs from Symptomatic Patients.
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  231. WILLIAMS E, Bond K, Zhang B, Putland M, et al
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  232. AVANISS-AGHAJANI E, Sarkissian A, Fernando F, Avaniss-Aghajani A, et al
    Validation of the Hologic Aptima Unisex and Multitest Specimen Collection Kits Used for Endocervical and Male Urethral Swab Specimens (Aptima Swabs) for Collection of Samples from SARS-CoV-2-Infected Patients.
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  233. MORAN A, Beavis KG, Matushek SM, Ciaglia C, et al
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  234. RHOADS DD, Cherian SS, Roman K, Stempak LM, et al
    Comparison of Abbott ID Now, DiaSorin Simplexa, and CDC FDA Emergency Use Authorization Methods for the Detection of SARS-CoV-2 from Nasopharyngeal and Nasal Swabs from Individuals Diagnosed with COVID-19.
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  235. CHOW EPF, Bradshaw CS, Williamson DA, Hall S, et al
    Changing from clinician-collected to self-collected throat swabs for oropharyngeal gonorrhoea and chlamydia screening among men who have sex with men.
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    June 2020
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    Comparability of Antibody Titers Determined by Hemagglutination Inhibition and Microneutralization Assays Against Seasonal Influenza Strains.
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    May 2020
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  238. VERMEIREN C, Marchand-Senecal X, Sheldrake E, Bulir D, et al
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  239. WANG Q, Du Q, Guo B, Mu D, et al
    A Method To Prevent SARS-CoV-2 IgM False Positives in Gold Immunochromatography and Enzyme-Linked Immunosorbent Assays.
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  240. POLJAK M, Korva M, Knap Gasper N, Fujs Komlos K, et al
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  241. NALLA AK, Casto AM, Huang MW, Perchetti GA, et al
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  242. TANG YW, Schmitz JE, Persing DH, Stratton CW, et al
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  243. CORREA-MARTINEZ CL, Kampmeier S, Kumpers P, Schwierzeck V, et al
    A Pandemic in Times of Global Tourism: Superspreading and Exportation of COVID-19 Cases from a Ski Area in Austria.
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  244. LIU W, Liu L, Kou G, Zheng Y, et al
    Evaluation of Nucleocapsid and Spike Protein-Based Enzyme-Linked Immunosorbent Assays for Detecting Antibodies against SARS-CoV-2.
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  245. RODINO KG, Espy MJ, Buckwalter SP, Walchak RC, et al
    Evaluation of Saline, Phosphate-Buffered Saline, and Minimum Essential Medium as Potential Alternatives to Viral Transport Media for SARS-CoV-2 Testing.
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    April 2020
  246. KHAN S, Siddique R, Shereen MA, Ali A, et al
    Emergence of a Novel Coronavirus, Severe Acute Respiratory Syndrome Coronavirus 2: Biology and Therapeutic Options.
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  247. CHAN JF, Yip CC, To KK, Tang TH, et al
    Improved Molecular Diagnosis of COVID-19 by the Novel, Highly Sensitive and Specific COVID-19-RdRp/Hel Real-Time Reverse Transcription-PCR Assay Validated In Vitro and with Clinical Specimens.
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  248. WINICHAKOON P, Chaiwarith R, Liwsrisakun C, Salee P, et al
    Negative Nasopharyngeal and Oropharyngeal Swabs Do Not Rule Out COVID-19.
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  249. YANG G, Hodges EN, Winter J, Zanders N, et al
    Development of an RNA strand-specific hybridization assay to differentiate replicating versus non-replicating influenza A virus.
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    March 2020
  250. STELLRECHT KA, Cimino JL, Maceira VP
    The Panther Fusion(R) System with Open Access Functionality for Lab Developed Tests (LDT) for Influenza A Subtyping.
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  251. YIP CC, Chan WM, Ip JD, Seng CW, et al
    Nanopore sequencing reveals novel targets for the diagnosis and surveillance of human and avian influenza A virus.
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    January 2020
  252. KANWAR N, Michael J, Doran K, Montgomery E, et al
    Comparison of the ID NOW(TM) Influenza A & B 2, Cobas((R)) Influenza A/B, and Xpert((R)) Xpress Flu Point-of-Care Nucleic Acid Amplification Tests for Influenza A/B Detection in Children.
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    October 2019
  253. LEWANDOWSKI K, Xu Y, Pullan ST, Lumley SF, et al
    Metagenomic Nanopore sequencing of influenza virus direct from clinical respiratory samples.
    J Clin Microbiol. 2019 Oct 30. pii: JCM.00963-19. doi: 10.1128/JCM.00963.
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    September 2019
  254. MOTTA FC, Born PS, Resende PC, Brown D, et al
    A cheap and accurate RT-PCR-melting temperature assay for real time Influenza B lineages discrimination.
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