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Articles published in
Proc Natl Acad Sci U S A
    April 2024
  1. HOGAN MP, Holding ML, Nystrom GS, Colston TJ, et al
    The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom.
    Proc Natl Acad Sci U S A. 2024;121:e2313440121.
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  2. SUN P, Lu Z, Wang Z, Wang S, et al
    Subgenome-aware analyses reveal the genomic consequences of ancient allopolyploid hybridizations throughout the cotton family.
    Proc Natl Acad Sci U S A. 2024;121:e2313921121.
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  3. BAHARAV TZ, Tse D, Salzman J
    OASIS: An interpretable, finite-sample valid alternative to Pearson's X(2) for scientific discovery.
    Proc Natl Acad Sci U S A. 2024;121:e2304671121.
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  4. LONG BM, Matsuda Y, Moroney JV
    Algal chloroplast pyrenoids: Evidence for convergent evolution.
    Proc Natl Acad Sci U S A. 2024;121:e2402546121.
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    March 2024
  5. KEHLET-DELGADO H, Montoya AP, Jensen KT, Wendlandt CE, et al
    The evolutionary genomics of adaptation to stress in wild rhizobium bacteria.
    Proc Natl Acad Sci U S A. 2024;121:e2311127121.
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  6. SHEINMAN M, Arndt PF, Massip F
    Modeling the mosaic structure of bacterial genomes to infer their evolutionary history.
    Proc Natl Acad Sci U S A. 2024;121:e2313367121.
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  7. PEZZINI D, Taylor KL, Reisig DD, Fritz ML, et al
    Cross-pollination in seed-blended refuge and selection for Vip3A resistance in a lepidopteran pest as detected by genomic monitoring.
    Proc Natl Acad Sci U S A. 2024;121:e2319838121.
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  8. SCHRAIBER JG, Edge MD
    Heritability within groups is uninformative about differences among groups: Cases from behavioral, evolutionary, and statistical genetics.
    Proc Natl Acad Sci U S A. 2024;121:e2319496121.
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  9. GROH JS, Coop G
    The temporal and genomic scale of selection following hybridization.
    Proc Natl Acad Sci U S A. 2024;121:e2309168121.
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  10. BORETTO M, Geurts MH, Gandhi S, Ma Z, et al
    Epidermal growth factor receptor (EGFR) is a target of the tumor-suppressor E3 ligase FBXW7.
    Proc Natl Acad Sci U S A. 2024;121:e2309902121.
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  11. KRUEGER J, Preusse M, Oswaldo Gomez N, Frommeyer YN, et al
    tRNA epitranscriptome determines pathogenicity of the opportunistic pathogen Pseudomonas aeruginosa.
    Proc Natl Acad Sci U S A. 2024;121:e2312874121.
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  12. SIMOES LG, Peyroteo-Stjerna R, Marchand G, Bernhardsson C, et al
    Genomic ancestry and social dynamics of the last hunter-gatherers of Atlantic France.
    Proc Natl Acad Sci U S A. 2024;121:e2310545121.
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  13. MOROMIZATO R, Fukuda K, Suzuki S, Motomura T, et al
    Pyrenoid proteomics reveals independent evolution of the CO(2)-concentrating organelle in chlorarachniophytes.
    Proc Natl Acad Sci U S A. 2024;121:e2318542121.
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    February 2024
  14. KEROACK CD, Elsworth B, Tennessen JA, Paul AS, et al
    Comparative chemical genomics in Babesia species identifies the alkaline phosphatase PhoD as a determinant of antiparasitic resistance.
    Proc Natl Acad Sci U S A. 2024;121:e2312987121.
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  15. LUKHTANOV VA
    Polytypic species concept and subspecies in the genomic era.
    Proc Natl Acad Sci U S A. 2024;121:e2317038121.
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  16. SIMON A, Coop G
    The contribution of gene flow, selection, and genetic drift to five thousand years of human allele frequency change.
    Proc Natl Acad Sci U S A. 2024;121:e2312377121.
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  17. NOCH EK, Palma L, Yim I, Bullen N, et al
    Cysteine induces mitochondrial reductive stress in glioblastoma through hydrogen peroxide production.
    Proc Natl Acad Sci U S A. 2024;121:e2317343121.
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  18. PHUNG TK, Berndsen K, Shastry R, Phan TLCHB, et al
    CURTAIN-A unique web-based tool for exploration and sharing of MS-based proteomics data.
    Proc Natl Acad Sci U S A. 2024;121:e2312676121.
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  19. YI T, Wagner G
    Malignant tumor cells engender second membrane-lined organelles for self-protection and tumor progression.
    Proc Natl Acad Sci U S A. 2024;121:e2317141121.
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  20. SPRINGSTEIN BL, Paulo JA, Park H, Henry K, et al
    Systematic analysis of nonprogrammed frameshift suppression in E. coli via translational tiling proteomics.
    Proc Natl Acad Sci U S A. 2024;121:e2317453121.
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  21. BAXI AB, Li J, Quach VM, Pade LR, et al
    Cell lineage-guided mass spectrometry reveals increased energy metabolism and reactive oxygen species in the vertebrate organizer.
    Proc Natl Acad Sci U S A. 2024;121:e2311625121.
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    January 2024
  22. CAMACHO-MATEU J, Lampo A, Sireci M, Munoz MA, et al
    Sparse species interactions reproduce abundance correlation patterns in microbial communities.
    Proc Natl Acad Sci U S A. 2024;121:e2309575121.
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  23. SUTTER PA, Willis CM, Menoret A, Nicaise AM, et al
    Astrocytic TIMP-1 regulates production of Anastellin, an inhibitor of oligodendrocyte differentiation and FTY720 responses.
    Proc Natl Acad Sci U S A. 2024;121:e2306816121.
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  24. LI C, Wickell D, Kuo LY, Chen X, et al
    Extraordinary preservation of gene collinearity over three hundred million years revealed in homosporous lycophytes.
    Proc Natl Acad Sci U S A. 2024;121:e2312607121.
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  25. ZHANG Y, Zhang H, Wu Y
    A general approach for inferring the ancestry of recent ancestors of an admixed individual.
    Proc Natl Acad Sci U S A. 2024;121:e2316242120.
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  26. YUAN J, Kitchener AC, Lackey LB, Sun T, et al
    The genome of the black-footed cat: Revealing a rich natural history and urgent conservation priorities for small felids.
    Proc Natl Acad Sci U S A. 2024;121:e2310763120.
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  27. VAUGHAN TG, Scire J, Nadeau SA, Stadler T, et al
    Estimates of early outbreak-specific SARS-CoV-2 epidemiological parameters from genomic data.
    Proc Natl Acad Sci U S A. 2024;121:e2308125121.
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    December 2023
  28. WEN J, Nasrallah IM, Abdulkadir A, Satterthwaite TD, et al
    Genomic loci influence patterns of structural covariance in the human brain.
    Proc Natl Acad Sci U S A. 2023;120:e2300842120.
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  29. ZHU S, Liu J, Patel V, Zhao X, et al
    Antigen exposure reshapes chromatin architecture in central memory CD8(+) T cells and imprints enhanced recall capacity.
    Proc Natl Acad Sci U S A. 2023;120:e2313476120.
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  30. SKAAR EP
    Biogeography of the genus Staphylococci on human skin.
    Proc Natl Acad Sci U S A. 2023;120:e2318509120.
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  31. ZHONG X, Moresco JJ, Diedrich JK, Pinto AM, et al
    Essential role of MFSD1-GLMP-GIMAP5 in lymphocyte survival and liver homeostasis.
    Proc Natl Acad Sci U S A. 2023;120:e2314429120.
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  32. BLANCO-PASTOR JL
    Inclusion of highly admixed genotypes in grapevine genomic analyses leads to an equivocal reconstruction of its domestication history.
    Proc Natl Acad Sci U S A. 2023;120:e2310026120.
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  33. JIN L, Chen Y, Muzaffar S, Li C, et al
    Epigenetic switch reshapes epithelial progenitor cell signatures and drives inflammatory pathogenesis in hidradenitis suppurativa.
    Proc Natl Acad Sci U S A. 2023;120:e2315096120.
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    November 2023
  34. ESPINOZA B, Adiga A, Venkatramanan S, Warren AS, et al
    Coupled models of genomic surveillance and evolving pandemics with applications for timely public health interventions.
    Proc Natl Acad Sci U S A. 2023;120:e2305227120.
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  35. TORRES ROBLES J, Lou HJ, Shi G, Pan PL, et al
    Linear motif specificity in signaling through p38alpha and ERK2 mitogen-activated protein kinases.
    Proc Natl Acad Sci U S A. 2023;120:e2316599120.
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  36. SIMMONS M, Horbelt N, Sverko T, Scoppola E, et al
    Invasive mussels fashion silk-like byssus via mechanical processing of massive horizontally acquired coiled coils.
    Proc Natl Acad Sci U S A. 2023;120:e2311901120.
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  37. JOGLEKAR P, Conlan S, Lee-Lin SQ, Deming C, et al
    Integrated genomic and functional analyses of human skin-associated Staphylococcus reveal extensive inter- and intra-species diversity.
    Proc Natl Acad Sci U S A. 2023;120:e2310585120.
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  38. HU W, Zhang R, Xu H, Li Y, et al
    CAMSAP1 role in orchestrating structure and dynamics of manchette microtubule minus-ends impacts male fertility during spermiogenesis.
    Proc Natl Acad Sci U S A. 2023;120:e2313787120.
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    October 2023
  39. BENEGAS G, Batra SS, Song YS
    DNA language models are powerful predictors of genome-wide variant effects.
    Proc Natl Acad Sci U S A. 2023;120:e2311219120.
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  40. CAO X, Kose C, Selby CP, Sancar A, et al
    In vitro DNA repair genomics using XR-seq with Escherichia coli and mammalian cell-free extracts.
    Proc Natl Acad Sci U S A. 2023;120:e2314233120.
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  41. MATHUR S, Mason AJ, Bradburd GS, Gibbs HL, et al
    Functional genomic diversity is correlated with neutral genomic diversity in populations of an endangered rattlesnake.
    Proc Natl Acad Sci U S A. 2023;120:e2303043120.
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  42. XIE Y, Ersan S, Guan X, Wang J, et al
    Unexpected metabolic rewiring of CO(2) fixation in H(2)-mediated materials-biology hybrids.
    Proc Natl Acad Sci U S A. 2023;120:e2308373120.
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  43. LIAO SE, Sudarshan M, Regev O
    Deciphering RNA splicing logic with interpretable machine learning.
    Proc Natl Acad Sci U S A. 2023;120:e2221165120.
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  44. DUFRESNES C, Poyarkov N, Jablonski D
    Acknowledging more biodiversity without more species.
    Proc Natl Acad Sci U S A. 2023;120:e2302424120.
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  45. GU TT, Wu H, Yang F, Gaubert P, et al
    Genomic analysis reveals a cryptic pangolin species.
    Proc Natl Acad Sci U S A. 2023;120:e2304096120.
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    September 2023
  46. ROTHMAN JE
    Starting at Go: Protein structure prediction succumbs to machine learning.
    Proc Natl Acad Sci U S A. 2023;120:e2311128120.
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  47. MASON FM, Kounlavong ES, Tebeje AT, Dahiya R, et al
    SETD2 safeguards the genome against isochromosome formation.
    Proc Natl Acad Sci U S A. 2023;120:e2303752120.
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  48. SIRECI M, Munoz MA, Grilli J
    Environmental fluctuations explain the universal decay of species-abundance correlations with phylogenetic distance.
    Proc Natl Acad Sci U S A. 2023;120:e2217144120.
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  49. OH DH, Ma X, Hogg SJ, He J, et al
    Rationally designed chimeric PI3K-BET bromodomain inhibitors elicit curative responses in MYC-driven lymphoma.
    Proc Natl Acad Sci U S A. 2023;120:e2306414120.
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  50. TAKAKURA M, Lam YH, Nakagawa R, Ng MY, et al
    Differential second messenger signaling via dopamine neurons bidirectionally regulates memory retention.
    Proc Natl Acad Sci U S A. 2023;120:e2304851120.
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    August 2023
  51. TAN R, Hoare M, Welle KA, Swovick K, et al
    Folding stabilities of ribosome-bound nascent polypeptides probed by mass spectrometry.
    Proc Natl Acad Sci U S A. 2023;120:e2303167120.
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  52. ZELLER MA, Ma J, Wong FY, Tum S, et al
    The genomic landscape of swine influenza A viruses in Southeast Asia.
    Proc Natl Acad Sci U S A. 2023;120:e2301926120.
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  53. MANGIOLA S, Roth-Schulze AJ, Trussart M, Zozaya-Valdes E, et al
    sccomp: Robust differential composition and variability analysis for single-cell data.
    Proc Natl Acad Sci U S A. 2023;120:e2203828120.
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  54. HUNG TH, So T, Thammavong B, Chamchumroon V, et al
    Range-wide differential adaptation and genomic offset in critically endangered Asian rosewoods.
    Proc Natl Acad Sci U S A. 2023;120:e2301603120.
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  55. MEHROTRA T, Konar D, Pragasam AK, Kumar S, et al
    Antimicrobial resistance heterogeneity among multidrug-resistant Gram-negative pathogens: Phenotypic, genotypic, and proteomic analysis.
    Proc Natl Acad Sci U S A. 2023;120:e2305465120.
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  56. RUBINA A, Patel M, Nightingale K, Potts M, et al
    ADAM17 targeting by human cytomegalovirus remodels the cell surface proteome to simultaneously regulate multiple immune pathways.
    Proc Natl Acad Sci U S A. 2023;120:e2303155120.
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  57. MALINVERNI D, Zamuner S, Rebeaud ME, Barducci A, et al
    Data-driven large-scale genomic analysis reveals an intricate phylogenetic and functional landscape in J-domain proteins.
    Proc Natl Acad Sci U S A. 2023;120:e2218217120.
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    July 2023
  58. FOKKENS L, Rep M
    Population genomics reveals meiotic recombination in Fusarium oxysporum.
    Proc Natl Acad Sci U S A. 2023;120:e2309677120.
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  59. DAVIDI L, Gallaher SD, Ben-David E, Purvine SO, et al
    Pumping iron: A multi-omics analysis of two extremophilic algae reveals iron economy management.
    Proc Natl Acad Sci U S A. 2023;120:e2305495120.
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  60. CHARLES OJ, Venturini C, Gantt S, Atkinson C, et al
    Genomic and geographical structure of human cytomegalovirus.
    Proc Natl Acad Sci U S A. 2023;120:e2221797120.
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  61. FUJIMURA T, Esteban R, Wickner RB
    Genomic fold of a "naked" ssRNA virus is critical for stability and propagation.
    Proc Natl Acad Sci U S A. 2023;120:e2309329120.
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  62. GU Z, Wang L, Dong Q, Xu K, et al
    Aberrant LYZ expression in tumor cells serves as the potential biomarker and target for HCC and promotes tumor progression via csGRP78.
    Proc Natl Acad Sci U S A. 2023;120:e2215744120.
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  63. GARDNER EM, Bruun-Lund S, Niissalo M, Chantarasuwan B, et al
    Echoes of ancient introgression punctuate stable genomic lineages in the evolution of figs.
    Proc Natl Acad Sci U S A. 2023;120:e2222035120.
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  64. VARGAS R JR, Luna MJ, Freschi L, Marin M, et al
    Phase variation as a major mechanism of adaptation in Mycobacterium tuberculosis complex.
    Proc Natl Acad Sci U S A. 2023;120:e2301394120.
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  65. SARTORIO MG, Pardue EJ, Scott NE, Feldman MF, et al
    Human gut bacteria tailor extracellular vesicle cargo for the breakdown of diet- and host-derived glycans.
    Proc Natl Acad Sci U S A. 2023;120:e2306314120.
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  66. FAYYAZ A, Robinson G, Chang PL, Bekele D, et al
    Hiding in plain sight: Genome-wide recombination and a dynamic accessory genome drive diversity in Fusarium oxysporum f.sp. ciceris.
    Proc Natl Acad Sci U S A. 2023;120:e2220570120.
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    June 2023
  67. HASEGAWA N, Techer MA, Adjlane N, Al-Hissnawi MS, et al
    Evolutionarily diverse origins of deformed wing viruses in western honey bees.
    Proc Natl Acad Sci U S A. 2023;120:e2301258120.
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  68. NOSIL P, Soria-Carrasco V, Villoutreix R, De-la-Mora M, et al
    Complex evolutionary processes maintain an ancient chromosomal inversion.
    Proc Natl Acad Sci U S A. 2023;120:e2300673120.
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  69. HARRISON LB, Behr MA
    Mutation rates and the molecular epidemiology of Mycobacterium abscessus.
    Proc Natl Acad Sci U S A. 2023;120:e2307499120.
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  70. GOMEZ-BAENA G, Pounder KC, Halstead JO, Roberts SA, et al
    Unraveling female communication through scent marks in the Norway rat.
    Proc Natl Acad Sci U S A. 2023;120:e2300794120.
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  71. KASUGA Y, Ouda R, Watanabe M, Sun X, et al
    FBXO11 constitutes a major negative regulator of MHC class II through ubiquitin-dependent proteasomal degradation of CIITA.
    Proc Natl Acad Sci U S A. 2023;120:e2218955120.
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  72. XIAO H, Liu Z, Wang N, Long Q, et al
    Adaptive and maladaptive introgression in grapevine domestication.
    Proc Natl Acad Sci U S A. 2023;120:e2222041120.
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  73. YOUNIS S, Jouneau A, Larsson M, Oudin JF, et al
    Ablation of ZC3H11A causes early embryonic lethality and dysregulation of metabolic processes.
    Proc Natl Acad Sci U S A. 2023;120:e2216799120.
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    May 2023
  74. SHIRAKAWA KT, Sala FA, Miyachiro MM, Job V, et al
    Architecture and genomic arrangement of the MurE-MurF bacterial cell wall biosynthesis complex.
    Proc Natl Acad Sci U S A. 2023;120:e2219540120.
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  75. GOYCHUK A, Kannan D, Chakraborty AK, Kardar M, et al
    Polymer folding through active processes recreates features of genome organization.
    Proc Natl Acad Sci U S A. 2023;120:e2221726120.
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  76. MELBY JA, Brown KA, Gregorich ZR, Roberts DS, et al
    High sensitivity top-down proteomics captures single muscle cell heterogeneity in large proteoforms.
    Proc Natl Acad Sci U S A. 2023;120:e2222081120.
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  77. REITZ CJ, Tavassoli M, Kim DH, Shah S, et al
    Proteomics and phosphoproteomics of failing human left ventricle identifies dilated cardiomyopathy-associated phosphorylation of CTNNA3.
    Proc Natl Acad Sci U S A. 2023;120:e2212118120.
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  78. SEXTON DL, Hashimi A, Beskrovnaya P, Sibanda L, et al
    The cell envelope of Thermotogae suggests a mechanism for outer membrane biogenesis.
    Proc Natl Acad Sci U S A. 2023;120:e2303275120.
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    April 2023
  79. BARTOLEC TK, Vazquez-Campos X, Norman A, Luong C, et al
    Cross-linking mass spectrometry discovers, evaluates, and corroborates structures and protein-protein interactions in the human cell.
    Proc Natl Acad Sci U S A. 2023;120:e2219418120.
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  80. WANG YJ, Tain T, Yu JY, Li J, et al
    Genomic and structural basis for evolution of tropane alkaloid biosynthesis.
    Proc Natl Acad Sci U S A. 2023;120:e2302448120.
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  81. LLEWELLYN J, Mallikarjun V, Appleton E, Osipova M, et al
    Loss of regulation of protein synthesis and turnover underpins an attenuated stress response in senescent human mesenchymal stem cells.
    Proc Natl Acad Sci U S A. 2023;120:e2210745120.
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  82. GESESSE CA, Nigir B, de Sousa K, Gianfranceschi L, et al
    Genomics-driven breeding for local adaptation of durum wheat is enhanced by farmers' traditional knowledge.
    Proc Natl Acad Sci U S A. 2023;120:e2205774119.
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  83. HUANG K, Jahani M, Gouzy J, Legendre A, et al
    The genomics of linkage drag in inbred lines of sunflower.
    Proc Natl Acad Sci U S A. 2023;120:e2205783119.
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  84. SANCHEZ D, Sadoun SB, Mary-Huard T, Allier A, et al
    Improving the use of plant genetic resources to sustain breeding programs' efficiency.
    Proc Natl Acad Sci U S A. 2023;120:e2205780119.
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    March 2023
  85. LATRILLE T, Rodrigue N, Lartillot N
    Genes and sites under adaptation at the phylogenetic scale also exhibit adaptation at the population-genetic scale.
    Proc Natl Acad Sci U S A. 2023;120:e2214977120.
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    February 2023
  86. SCHMID C, Schiffels S
    Estimating human mobility in Holocene Western Eurasia with large-scale ancient genomic data.
    Proc Natl Acad Sci U S A. 2023;120:e2218375120.
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  87. CHUANG TP, Lai WY, Gabre JL, Lind DE, et al
    ALK fusion NSCLC oncogenes promote survival and inhibit NK cell responses via SERPINB4 expression.
    Proc Natl Acad Sci U S A. 2023;120:e2216479120.
    >> Share

  88. MANOUCHEHRI N, Salinas VH, Hussain RZ, Stuve O, et al
    Distinctive transcriptomic and epigenomic signatures of bone marrow-derived myeloid cells and microglia in CNS autoimmunity.
    Proc Natl Acad Sci U S A. 2023;120:e2212696120.
    >> Share

  89. ZONG W, Rahman T, Zhu L, Zeng X, et al
    Transcriptomic congruence analysis for evaluating model organisms.
    Proc Natl Acad Sci U S A. 2023;120:e2202584120.
    >> Share

  90. WERSEBE MJ, Weider LJ
    Resurrection genomics provides molecular and phenotypic evidence of rapid adaptation to salinization in a keystone aquatic species.
    Proc Natl Acad Sci U S A. 2023;120:e2217276120.
    >> Share

    January 2023
  91. PRESKA STEINBERG A, Silander OK, Kussell E
    Correlated substitutions reveal SARS-like coronaviruses recombine frequently with a diverse set of structured gene pools.
    Proc Natl Acad Sci U S A. 2023;120:e2206945119.
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  92. STONEKING M, Arias L, Liu D, Oliveira S, et al
    Genomic perspectives on human dispersals during the Holocene.
    Proc Natl Acad Sci U S A. 2023;120:e2209475119.
    >> Share

  93. LI X, Yue X, Sepulveda H, Burt RA, et al
    OGT controls mammalian cell viability by regulating the proteasome/mTOR/ mitochondrial axis.
    Proc Natl Acad Sci U S A. 2023;120:e2218332120.
    >> Share

  94. FLESKES RE, Cabana GS, Gilmore JK, Juarez C, et al
    Community-engaged ancient DNA project reveals diverse origins of 18th-century African descendants in Charleston, South Carolina.
    Proc Natl Acad Sci U S A. 2023;120:e2201620120.
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  95. HE X
    Culture-based approaches to studying "microbial dark matter".
    Proc Natl Acad Sci U S A. 2023;120:e2219691120.
    >> Share

  96. CASSEMIRO FAS, Albert JS, Antonelli A, Menegotto A, et al
    Landscape dynamics and diversification of the megadiverse South American freshwater fish fauna.
    Proc Natl Acad Sci U S A. 2023;120:e2211974120.
    >> Share

  97. LEA AJ, Garcia A, Arevalo J, Ayroles JF, et al
    Natural selection of immune and metabolic genes associated with health in two lowland Bolivian populations.
    Proc Natl Acad Sci U S A. 2023;120:e2207544120.
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    December 2022
  98. TABILAS C, Iu DS, Daly CWP, Yee Mon KJ, et al
    Early microbial exposure shapes adult immunity by altering CD8+ T cell development.
    Proc Natl Acad Sci U S A. 2022;119:e2212548119.
    >> Share

  99. XIE B, Wang J, Nie Y, Tian J, et al
    Type IV pili trigger episymbiotic association of Saccharibacteria with its bacterial host.
    Proc Natl Acad Sci U S A. 2022;119:e2215990119.
    >> Share

    November 2022
  100. ZOLOTAREV N, Bayer M, Grosschedl R
    EBF1 is continuously required for stabilizing local chromatin accessibility in pro-B cells.
    Proc Natl Acad Sci U S A. 2022;119:e2210595119.
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  101. BARBIERI C, Blasi DE, Arango-Isaza E, Sotiropoulos AG, et al
    A global analysis of matches and mismatches between human genetic and linguistic histories.
    Proc Natl Acad Sci U S A. 2022;119:e2122084119.
    >> Share

  102. KOLESKE ML, McInnes G, Brown JEH, Thomas N, et al
    Functional genomics of OCTN2 variants informs protein-specific variant effect predictor for Carnitine Transporter Deficiency.
    Proc Natl Acad Sci U S A. 2022;119:e2210247119.
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  103. SCHMITZ LL, Duque V
    In utero exposure to the Great Depression is reflected in late-life epigenetic aging signatures.
    Proc Natl Acad Sci U S A. 2022;119:e2208530119.
    >> Share

  104. GIERUS L, Birand A, Bunting MD, Godahewa GI, et al
    Leveraging a natural murine meiotic drive to suppress invasive populations.
    Proc Natl Acad Sci U S A. 2022;119:e2213308119.
    >> Share

  105. ATMORE LM, Martinez-Garcia L, Makowiecki D, Andre C, et al
    Population dynamics of Baltic herring since the Viking Age revealed by ancient DNA and genomics.
    Proc Natl Acad Sci U S A. 2022;119:e2208703119.
    >> Share

  106. JAMALUDDIN MFB, Ghosh A, Ingle A, Mohammed R, et al
    Bovine and human endometrium-derived hydrogels support organoid culture from healthy and cancerous tissues.
    Proc Natl Acad Sci U S A. 2022;119:e2208040119.
    >> Share

    October 2022
  107. FALAHATI H, Wu Y, Feuerer V, Simon HG, et al
    Proximity proteomics of synaptopodin provides insight into the molecular composition of the spine apparatus of dendritic spines.
    Proc Natl Acad Sci U S A. 2022;119:e2203750119.
    >> Share

  108. HIROOKA S, Itabashi T, Ichinose TM, Onuma R, et al
    Life cycle and functional genomics of the unicellular red alga Galdieria for elucidating algal and plant evolution and industrial use.
    Proc Natl Acad Sci U S A. 2022;119:e2210665119.
    >> Share

  109. SCHRAGO CG
    Genomic basis of neotropical primate adaptations.
    Proc Natl Acad Sci U S A. 2022;119:e2213527119.
    >> Share

  110. BANUELOS MM, Zavaleta YJA, Roldan A, Reyes RJ, et al
    Associations between forensic loci and expression levels of neighboring genes may compromise medical privacy.
    Proc Natl Acad Sci U S A. 2022;119:e2121024119.
    >> Share

  111. HOGG CJ, Belov K
    Reply to DeWoody et al.: Inequitable access to affordable sequencing limits the benefits from population genomic insights.
    Proc Natl Acad Sci U S A. 2022;119:e2211129119.
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  112. LI ML, Wang S, Xu P, Tian HY, et al
    Functional genomics analysis reveals the evolutionary adaptation and demographic history of pygmy lorises.
    Proc Natl Acad Sci U S A. 2022;119:e2123030119.
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  113. ALAGOZ G, Molz B, Eising E, Schijven D, et al
    Using neuroimaging genomics to investigate the evolution of human brain structure.
    Proc Natl Acad Sci U S A. 2022;119:e2200638119.
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  114. LI HZ, Yang K, Liao H, Lassen SB, et al
    Active antibiotic resistome in soils unraveled by single-cell isotope probing and targeted metagenomics.
    Proc Natl Acad Sci U S A. 2022;119:e2201473119.
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  115. CIUFFA R, Uliana F, Mannion J, Mehnert M, et al
    Novel biochemical, structural, and systems insights into inflammatory signaling revealed by contextual interaction proteomics.
    Proc Natl Acad Sci U S A. 2022;119:e2117175119.
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    September 2022
  116. BRENNAN RS, deMayo JA, Dam HG, Finiguerra M, et al
    Experimental evolution reveals the synergistic genomic mechanisms of adaptation to ocean warming and acidification in a marine copepod.
    Proc Natl Acad Sci U S A. 2022;119:e2201521119.
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  117. DING DY, Li S, Narasimhan B, Tibshirani R, et al
    Cooperative learning for multiview analysis.
    Proc Natl Acad Sci U S A. 2022;119:e2202113119.
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  118. SAUNDERS JK, McIlvin MR, Dupont CL, Kaul D, et al
    Microbial functional diversity across biogeochemical provinces in the central Pacific Ocean.
    Proc Natl Acad Sci U S A. 2022;119:e2200014119.
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  119. PASCUAL-TORNER M, Carrero D, Perez-Silva JG, Alvarez-Puente D, et al
    Comparative genomics of mortal and immortal cnidarians unveils novel keys behind rejuvenation.
    Proc Natl Acad Sci U S A. 2022;119:e2118763119.
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  120. LEBEDIN M, Foglierini M, Khorkova S, Vazquez Garcia C, et al
    Different classes of genomic inserts contribute to human antibody diversity.
    Proc Natl Acad Sci U S A. 2022;119:e2205470119.
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  121. HLEDIK M, Barton N, Tkacik G
    Accumulation and maintenance of information in evolution.
    Proc Natl Acad Sci U S A. 2022;119:e2123152119.
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    August 2022
  122. DEWOODY JA, Jeon JY, Bickham JW, Heenkenda EJ, et al
    The Threatened Species Imperative: Conservation assessments would benefit from population genomic insights.
    Proc Natl Acad Sci U S A. 2022;119:e2210685119.
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  123. FELDMAN HC, Merlini E, Guijas C, DeMeester KE, et al
    Selective inhibitors of SARM1 targeting an allosteric cysteine in the autoregulatory ARM domain.
    Proc Natl Acad Sci U S A. 2022;119:e2208457119.
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  124. BYRNE H, Webster TH, Brosnan SF, Izar P, et al
    Signatures of adaptive evolution in platyrrhine primate genomes.
    Proc Natl Acad Sci U S A. 2022;119:e2116681119.
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  125. ALVES JM, Carneiro M, Day JP, Welch JJ, et al
    A single introduction of wild rabbits triggered the biological invasion of Australia.
    Proc Natl Acad Sci U S A. 2022;119:e2122734119.
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  126. MOCK F, Kretschmer F, Kriese A, Bocker S, et al
    Taxonomic classification of DNA sequences beyond sequence similarity using deep neural networks.
    Proc Natl Acad Sci U S A. 2022;119:e2122636119.
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  127. TROWBRIDGE AD, Seath CP, Rodriguez-Rivera FP, Li BX, et al
    Small molecule photocatalysis enables drug target identification via energy transfer.
    Proc Natl Acad Sci U S A. 2022;119:e2208077119.
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  128. CHAVEZ DE, Gronau I, Hains T, Dikow RB, et al
    Comparative genomics uncovers the evolutionary history, demography, and molecular adaptations of South American canids.
    Proc Natl Acad Sci U S A. 2022;119:e2205986119.
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  129. CAI Z, Lei J, Roeder K
    Model-free prediction test with application to genomics data.
    Proc Natl Acad Sci U S A. 2022;119:e2205518119.
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  130. GWAK JH, Awala SI, Nguyen NL, Yu WJ, et al
    Sulfur and methane oxidation by a single microorganism.
    Proc Natl Acad Sci U S A. 2022;119:e2114799119.
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  131. KOILE E, Greenhill SJ, Blasi DE, Bouckaert R, et al
    Phylogeographic analysis of the Bantu language expansion supports a rainforest route.
    Proc Natl Acad Sci U S A. 2022;119:e2112853119.
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  132. CABRERIZO MJ, Maranon E
    Net effect of environmental fluctuations in multiple global-change drivers across the tree of life.
    Proc Natl Acad Sci U S A. 2022;119:e2205495119.
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  133. ORLIAC EJ, Trejo Banos D, Ojavee SE, Lall K, et al
    Improving GWAS discovery and genomic prediction accuracy in biobank data.
    Proc Natl Acad Sci U S A. 2022;119:e2121279119.
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    July 2022
  134. STENSETH NC, Andersson L, Hoekstra HE
    Gregor Johann Mendel and the development of modern evolutionary biology.
    Proc Natl Acad Sci U S A. 2022;119:e2201327119.
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  135. CHOI YS, Kim MJ, Choi EA, Kim S, et al
    Antibody-mediated blockade for galectin-3 binding protein in tumor secretome abrogates PDAC metastasis.
    Proc Natl Acad Sci U S A. 2022;119:e2119048119.
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  136. BOMBLIES K, Peichel CL
    Genetics of adaptation.
    Proc Natl Acad Sci U S A. 2022;119:e2122152119.
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  137. HOEKSTRA HE, Robinson GE
    Behavioral genetics and genomics: Mendel's peas, mice, and bees.
    Proc Natl Acad Sci U S A. 2022;119:e2122154119.
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  138. HARTL DL
    Gregor Johann Mendel: From peasant to priest, pedagogue, and prelate.
    Proc Natl Acad Sci U S A. 2022;119:e2121953119.
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  139. PAN M, Morovic W, Hidalgo-Cantabrana C, Roberts A, et al
    Genomic and epigenetic landscapes drive CRISPR-based genome editing in Bifidobacterium.
    Proc Natl Acad Sci U S A. 2022;119:e2205068119.
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  140. LIN MC, Yu CJ, Lee FS
    Phosphorylation of Arl4A/D promotes their binding by the HYPK chaperone for their stable recruitment to the plasma membrane.
    Proc Natl Acad Sci U S A. 2022;119:e2207414119.
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  141. HU Y, Satten GA, Hu YJ
    LOCOM: A logistic regression model for testing differential abundance in compositional microbiome data with false discovery rate control.
    Proc Natl Acad Sci U S A. 2022;119:e2122788119.
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  142. FANG J, Pietzsch C, Witwit H, Tsaprailis G, et al
    Proximity interactome analysis of Lassa polymerase reveals eRF3a/GSPT1 as a druggable target for host-directed antivirals.
    Proc Natl Acad Sci U S A. 2022;119:e2201208119.
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  143. BARTON NH
    The "New Synthesis".
    Proc Natl Acad Sci U S A. 2022;119:e2122147119.
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  144. IRION U, Nusslein-Volhard C
    Developmental genetics with model organisms.
    Proc Natl Acad Sci U S A. 2022;119:e2122148119.
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  145. BERRY A, Browne J
    Mendel and Darwin.
    Proc Natl Acad Sci U S A. 2022;119:e2122144119.
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  146. SARDAR D, Chen HC, Reyes A, Varadharajan S, et al
    Sox9 directs divergent epigenomic states in brain tumor subtypes.
    Proc Natl Acad Sci U S A. 2022;119:e2202015119.
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  147. HERNANDEZ J, Kaun KR
    Alcohol, neuronal plasticity, and mitochondrial trafficking.
    Proc Natl Acad Sci U S A. 2022;119:e2208744119.
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  148. MCAVOY A, Wakeley J
    Evaluating the structure-coefficient theorem of evolutionary game theory.
    Proc Natl Acad Sci U S A. 2022;119:e2119656119.
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    June 2022
  149. SMALL CM, Healey HM, Currey MC, Beck EA, et al
    Leafy and weedy seadragon genomes connect genic and repetitive DNA features to the extravagant biology of syngnathid fishes.
    Proc Natl Acad Sci U S A. 2022;119:e2119602119.
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  150. MARKOWITZ RHG, LaBella AL, Shi M, Rokas A, et al
    Microbiome-associated human genetic variants impact phenome-wide disease risk.
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  151. LILLIE M, Hill J, Pettersson ME, Jern P, et al
    Expansion of a retrovirus lineage in the koala genome.
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  152. GILBERT E, Shanmugam A, Cavalleri GL
    Revealing the recent demographic history of Europe via haplotype sharing in the UK Biobank.
    Proc Natl Acad Sci U S A. 2022;119:e2119281119.
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  153. SIMONETTI B, Daly JL, Simon-Gracia L, Klein K, et al
    ESCPE-1 mediates retrograde endosomal sorting of the SARS-CoV-2 host factor Neuropilin-1.
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  154. CAI R, Ren J, Guo M, Wei T, et al
    Dynamic intracellular exchange of nanomaterials' protein corona perturbs proteostasis and remodels cell metabolism.
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    May 2022
  155. HORVATH S, Lu AT, Haghani A, Zoller JA, et al
    DNA methylation clocks for dogs and humans.
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  156. MCHARG S, Booth L, Perveen R, Riba Garcia I, et al
    Mast cell infiltration of the choroid and protease release are early events in age-related macular degeneration associated with genetic risk at both chromosomes 1q32 and 10q26.
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  157. LIU X, Zhang S, Cai Z, Kuang Z, et al
    Genomic insights into zokors' phylogeny and speciation in China.
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  158. SINGH A, Spitzer MH, Joy JP, Kaileh M, et al
    Postmitotic G1 phase survivin drives mitogen-independent cell division of B lymphocytes.
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  159. RIVOLLAT M, Thomas A, Ghesquiere E, Rohrlach AB, et al
    Ancient DNA gives new insights into a Norman Neolithic monumental cemetery dedicated to male elites.
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    April 2022
  160. ROSE TD, Bechtler T, Ciora OA, Anh Lilian Le K, et al
    MoSBi: Automated signature mining for molecular stratification and subtyping.
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  161. MILLS MC, Mathieson I
    The challenge of detecting recent natural selection in human populations.
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  162. MARCINIAK S, Bergey CM, Silva AM, Haluszko A, et al
    An integrative skeletal and paleogenomic analysis of stature variation suggests relatively reduced health for early European farmers.
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  163. BREUSING C, Genetti M, Russell SL, Corbett-Detig RB, et al
    Horizontal transmission enables flexible associations with locally adapted symbiont strains in deep-sea hydrothermal vent symbioses.
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    March 2022
  164. LANDIS MJ, Quintero I, Munoz MM, Zapata F, et al
    Phylogenetic inference of where species spread or split across barriers.
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  165. RAO R, Leibler S
    Evolutionary dynamics, evolutionary forces, and robustness: A nonequilibrium statistical mechanics perspective.
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  166. SEVERSON AL, Byrd BF, Mallott EK, Owings AC, et al
    Ancient and modern genomics of the Ohlone Indigenous population of California.
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  167. WU W, Gao YD, Jiang DC, Lei J, et al
    Genomic adaptations for arboreal locomotion in Asian flying treefrogs.
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  168. KRAINC T, Fuentes A
    Genetic ancestry in precision medicine is reshaping the race debate.
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  169. KOLDAEVA A, Tsai HF, Shen AQ, Pigolotti S, et al
    Population genetics in microchannels.
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  170. ZHANG S, Nelson OD, Price IR, Zhu C, et al
    Long-chain fatty acyl coenzyme A inhibits NME1/2 and regulates cancer metastasis.
    Proc Natl Acad Sci U S A. 2022;119:e2117013119.
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  171. BARBIERI S, Nurni Ravi A, Griffin EE, Gotta M, et al
    Modeling protein dynamics in Caenorhabditis elegans embryos reveals that the PLK-1 gradient relies on weakly coupled reaction-diffusion mechanisms.
    Proc Natl Acad Sci U S A. 2022;119:e2114205119.
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  172. LU Q, Zhang Y, Hellner J, Giannini C, et al
    Proteome-wide cellular thermal shift assay reveals unexpected cross-talk between brassinosteroid and auxin signaling.
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  173. MCCULLOUGH EL, Whittington E, Singh A, Pitnick S, et al
    The life history of Drosophila sperm involves molecular continuity between male and female reproductive tracts.
    Proc Natl Acad Sci U S A. 2022;119:e2119899119.
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  174. BOHL JA, Lay S, Chea S, Ahyong V, et al
    Discovering disease-causing pathogens in resource-scarce Southeast Asia using a global metagenomic pathogen monitoring system.
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  175. KLEINMAN-RUIZ D, Lucena-Perez M, Villanueva B, Fernandez J, et al
    Purging of deleterious burden in the endangered Iberian lynx.
    Proc Natl Acad Sci U S A. 2022;119:e2110614119.
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  176. FERDOSI S, Tangeysh B, Brown TR, Everley PA, et al
    Engineered nanoparticles enable deep proteomics studies at scale by leveraging tunable nano-bio interactions.
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  177. WINKLER J, Liu P, Phong K, Hinrichs JH, et al
    Bisphenol A replacement chemicals, BPF and BPS, induce protumorigenic changes in human mammary gland organoid morphology and proteome.
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  178. WEIGERT MUNOZ A, Hoyer E, Schumacher K, Grognot M, et al
    Eukaryotic catecholamine hormones influence the chemotactic control of Vibrio campbellii by binding to the coupling protein CheW.
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  179. GOVERNA V, Talbot H, Goncalves de Oliveira K, Cerezo-Magana M, et al
    Landscape of surfaceome and endocytome in human glioma is divergent and depends on cellular spatial organization.
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    February 2022
  180. SODELAND M, Jentoft S, Jorde PE, Mattingsdal M, et al
    Stabilizing selection on Atlantic cod supergenes through a millennium of extensive exploitation.
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  181. DULIAS K, Foody MGB, Justeau P, Silva M, et al
    Ancient DNA at the edge of the world: Continental immigration and the persistence of Neolithic male lineages in Bronze Age Orkney.
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  182. WAN J, Browne PJ, Hershey DM, Montabana E, et al
    A protease-mediated switch regulates the growth of magnetosome organelles in Magnetospirillum magneticum.
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  183. CHAVEZ MONTES RA, Haber A, Pardo J, Powell RF, et al
    A comparative genomics examination of desiccation tolerance and sensitivity in two sister grass species.
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  184. MADRIGAL JL, Schoepp NG, Xu L, Powell CS, et al
    Characterizing cell interactions at scale with made-to-order droplet ensembles (MODEs).
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    January 2022
  185. SHERKOW JS, Barker KB, Braverman I, Cook-Deegan R, et al
    Ethical, legal, and social issues in the Earth BioGenome Project.
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  186. SINGHAL S, Colli GR, Grundler MR, Costa GC, et al
    No link between population isolation and speciation rate in squamate reptiles.
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  187. CONTRERAS-LOPEZ O, Vidal EA, Riveras E, Alvarez JM, et al
    Spatiotemporal analysis identifies ABF2 and ABF3 as key hubs of endodermal response to nitrate.
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  188. MC CARTNEY AM, Anderson J, Liggins L, Hudson ML, et al
    Balancing openness with Indigenous data sovereignty: An opportunity to leave no one behind in the journey to sequence all of life.
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  189. STEPHAN T, Burgess SM, Cheng H, Danko CG, et al
    Darwinian genomics and diversity in the tree of life.
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  190. HOGG CJ, Ottewell K, Latch P, Rossetto M, et al
    Threatened Species Initiative: Empowering conservation action using genomic resources.
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  191. Sequence locally, think globally: The Darwin Tree of Life Project.
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  192. HUDDART JEA, Crawford AJ, Luna-Tapia AL, Restrepo S, et al
    EBP-Colombia and the bioeconomy: Genomics in the service of biodiversity conservation and sustainable development.
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  193. KRESS WJ, Soltis DE, Kersey PJ, Wegrzyn JL, et al
    Green plant genomes: What we know in an era of rapidly expanding opportunities.
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  194. LAWNICZAK MKN, Durbin R, Flicek P, Lindblad-Toh K, et al
    Standards recommendations for the Earth BioGenome Project.
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  195. BLAXTER M, Archibald JM, Childers AK, Coddington JA, et al
    Why sequence all eukaryotes?
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  196. LEWIN HA, Richards S, Lieberman Aiden E, Allende ML, et al
    The Earth BioGenome Project 2020: Starting the clock.
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  197. KANAGARAJ R, Mitter R, Kantidakis T, Edwards MM, et al
    Integrated genome and transcriptome analyses reveal the mechanism of genome instability in ataxia with oculomotor apraxia 2.
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  198. SHIGENOBU S, Hayashi Y, Watanabe D, Tokuda G, et al
    Genomic and transcriptomic analyses of the subterranean termite Reticulitermes speratus: Gene duplication facilitates social evolution.
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  199. SAKAI HD, Nur N, Kato S, Yuki M, et al
    Insight into the symbiotic lifestyle of DPANN archaea revealed by cultivation and genome analyses.
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  200. BELLINGER MR, Wei J, Hartmann U, Cadiou H, et al
    Conservation of magnetite biomineralization genes in all domains of life and implications for magnetic sensing.
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  201. LIU Y, Vasina VV, Kraner ME, Peters WS, et al
    Proteomics of isolated sieve tubes from Nicotiana tabacum: sieve element-specific proteins reveal differentiation of the endomembrane system.
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  202. WILLI Y, Kristensen TN, Sgro CM, Weeks AR, et al
    Conservation genetics as a management tool: The five best-supported paradigms to assist the management of threatened species.
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    December 2021
  203. GUINDON S, De Maio N
    Accounting for spatial sampling patterns in Bayesian phylogeography.
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  204. HOTALING S, Kelley JL, Frandsen PB
    Toward a genome sequence for every animal: Where are we now?
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  205. SONG JHT, Grant RL, Behrens VC, Kucka M, et al
    Genetic studies of human-chimpanzee divergence using stem cell fusions.
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  206. JASPERS C, Ehrlich M, Pujolar JM, Kunzel S, et al
    Invasion genomics uncover contrasting scenarios of genetic diversity in a widespread marine invader.
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  207. MA Q, Caillier SJ, Muzic S, Wilson MR, et al
    Specific hypomethylation programs underpin B cell activation in early multiple sclerosis.
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  208. CHENG Y, Miller MJ, Zhang D, Xiong Y, et al
    Parallel genomic responses to historical climate change and high elevation in East Asian songbirds.
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  209. KHAN A, Patel K, Shukla H, Viswanathan A, et al
    Genomic evidence for inbreeding depression and purging of deleterious genetic variation in Indian tigers.
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  210. VANDEWOUDE S, Vousden KH
    A celebration of the life of George Vande Woude.
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  211. RYBARSKI JR, Hu K, Hill AM, Wilke CO, et al
    Metagenomic discovery of CRISPR-associated transposons.
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    November 2021
  212. VASHISTH M, Cho S, Irianto J, Xia Y, et al
    Scaling concepts in 'omics: Nuclear lamin-B scales with tumor growth and often predicts poor prognosis, unlike fibrosis.
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  213. AHERN OM, Whittaker KA, Williams TC, Hunt DE, et al
    Host genotype structures the microbiome of a globally dispersed marine phytoplankton.
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  214. KARDOS M, Armstrong EE, Fitzpatrick SW, Hauser S, et al
    The crucial role of genome-wide genetic variation in conservation.
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  215. LEE J, Lim C, Han TH, Andreani T, et al
    The E3 ubiquitin ligase adaptor Tango10 links the core circadian clock to neuropeptide and behavioral rhythms.
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  216. CHEN W, Wu Y, Fritschi FB, Juenger TE, et al
    The genetic basis of the root economics spectrum in a perennial grass.
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  217. XU C, Fang X, Lu T, Dean C, et al
    Antagonistic cotranscriptional regulation through ARGONAUTE1 and the THO/TREX complex orchestrates FLC transcriptional output.
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  218. BIRDSEYE D, de Boer LA, Bai H, Zhou P, et al
    Plant height heterosis is quantitatively associated with expression levels of plastid ribosomal proteins.
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  219. LAGUNAS-ROBLES G, Purcell J, Brelsford A
    Linked supergenes underlie split sex ratio and social organization in an ant.
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  220. HASEGAWA Y, Struhl K
    Different SP1 binding dynamics at individual genomic loci in human cells.
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  221. DELMONT TO
    Discovery of nondiazotrophic Trichodesmium species abundant and widespread in the open ocean.
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  222. ESHEL G, Araus V, Undurraga S, Soto DC, et al
    Plant ecological genomics at the limits of life in the Atacama Desert.
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  223. MOLIMAU-SAMASONI S, Woolner VH, Foliga ST, Robichon K, et al
    Functional genomics and metabolomics advance the ethnobotany of the Samoan traditional medicine "matalafi".
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  224. QIAO Q, Edger PP, Xue L, Qiong, et al
    Evolutionary history and pan-genome dynamics of strawberry (Fragaria spp.).
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  225. ZHANG L, Richards A, Barrasa MI, Hughes SH, et al
    Reply to Briggs et al.: Genomic integration and expression of SARS-CoV-2 sequences can explain prolonged or recurrent viral RNA detection.
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    October 2021
  226. VIEGAS J
    Profile of Jennifer Marshall Graves.
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  227. GARCIA-SASTRE A
    Genomics serology to inform therapies and vaccines for arthritogenic alphaviruses.
    Proc Natl Acad Sci U S A. 2021;118.
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    September 2021
  228. FEUERBORN TR, Carmagnini A, Losey RJ, Nomokonova T, et al
    Modern Siberian dog ancestry was shaped by several thousand years of Eurasian-wide trade and human dispersal.
    Proc Natl Acad Sci U S A. 2021;118.
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  229. SAGAR V, Kaelin CB, Natesh M, Reddy PA, et al
    High frequency of an otherwise rare phenotype in a small and isolated tiger population.
    Proc Natl Acad Sci U S A. 2021;118.
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  230. SIX C, Ratin M, Marie D, Corre E, et al
    Marine Synechococcus picocyanobacteria: Light utilization across latitudes.
    Proc Natl Acad Sci U S A. 2021;118.
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  231. HAGEDORN M, Page CA, O'Neil KL, Flores DM, et al
    Assisted gene flow using cryopreserved sperm in critically endangered coral.
    Proc Natl Acad Sci U S A. 2021;118.
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  232. COPE OL, Keefover-Ring K, Kruger EL, Lindroth RL, et al
    Growth-defense trade-offs shape population genetic composition in an iconic forest tree species.
    Proc Natl Acad Sci U S A. 2021;118.
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  233. NEVES DM, Kerkhoff AJ, Echeverria-Londono S, Merow C, et al
    The adaptive challenge of extreme conditions shapes evolutionary diversity of plant assemblages at continental scales.
    Proc Natl Acad Sci U S A. 2021;118.
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  234. BUTTNER H, Niehs SP, Vandelannoote K, Cseresnyes Z, et al
    Bacterial endosymbionts protect beneficial soil fungus from nematode attack.
    Proc Natl Acad Sci U S A. 2021;118.
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  235. YUAN Y, Zhang Y, Zhang P, Liu C, et al
    Comparative genomics provides insights into the aquatic adaptations of mammals.
    Proc Natl Acad Sci U S A. 2021;118.
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  236. CHOI JY, Dai X, Alam O, Peng JZ, et al
    Ancestral polymorphisms shape the adaptive radiation of Metrosideros across the Hawaiian Islands.
    Proc Natl Acad Sci U S A. 2021;118.
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  237. ZHU Z, Fan Y, Kong Y, Lv J, et al
    DeepLINK: Deep learning inference using knockoffs with applications to genomics.
    Proc Natl Acad Sci U S A. 2021;118.
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  238. FLEISCHER V, Gonzalez-Escamilla G, Ciolac D, Albrecht P, et al
    Translational value of choroid plexus imaging for tracking neuroinflammation in mice and humans.
    Proc Natl Acad Sci U S A. 2021;118.
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  239. SYNEK L, Pleskot R, Sekeres J, Serrano N, et al
    Plasma membrane phospholipid signature recruits the plant exocyst complex via the EXO70A1 subunit.
    Proc Natl Acad Sci U S A. 2021;118.
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  240. BRAMANTI B, Wu Y, Yang R, Cui Y, et al
    Assessing the origins of the European Plagues following the Black Death: A synthesis of genomic, historical, and ecological information.
    Proc Natl Acad Sci U S A. 2021;118.
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  241. KARS ME, Basak AN, Onat OE, Bilguvar K, et al
    The genetic structure of the Turkish population reveals high levels of variation and admixture.
    Proc Natl Acad Sci U S A. 2021;118.
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    August 2021
  242. HO CM, Jih J, Lai M, Li X, et al
    Native structure of the RhopH complex, a key determinant of malaria parasite nutrient acquisition.
    Proc Natl Acad Sci U S A. 2021;118.
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  243. NELSON DL, Caskey CT
    Stephen T. Warren: Human geneticist who advanced understanding of mutational mechanisms and developmental disorders.
    Proc Natl Acad Sci U S A. 2021;118.
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  244. BIRZU G, Hallatschek O, Korolev KS
    Genealogical structure changes as range expansions transition from pushed to pulled.
    Proc Natl Acad Sci U S A. 2021;118.
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  245. TOCZYDLOWSKI RH, Liggins L, Gaither MR, Anderson TJ, et al
    Poor data stewardship will hinder global genetic diversity surveillance.
    Proc Natl Acad Sci U S A. 2021;118.
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  246. TRIPODI P, Rabanus-Wallace MT, Barchi L, Kale S, et al
    Global range expansion history of pepper (Capsicum spp.) revealed by over 10,000 genebank accessions.
    Proc Natl Acad Sci U S A. 2021;118.
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  247. ZHANG L, Richards A, Barrasa MI, Hughes SH, et al
    Response to Parry et al.: Strong evidence for genomic integration of SARS-CoV-2 sequences and expression in patient tissues.
    Proc Natl Acad Sci U S A. 2021;118.
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  248. LEE S, Sieradzki ET, Nicolas AM, Walker RL, et al
    Methane-derived carbon flows into host-virus networks at different trophic levels in soil.
    Proc Natl Acad Sci U S A. 2021;118.
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  249. WHEAT A, Yu C, Wang X, Burke AM, et al
    Protein interaction landscapes revealed by advanced in vivo cross-linking-mass spectrometry.
    Proc Natl Acad Sci U S A. 2021;118.
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  250. QI Y, Nepal KK, Blodgett JAV
    A comparative metabologenomic approach reveals mechanistic insights into Streptomyces antibiotic crypticity.
    Proc Natl Acad Sci U S A. 2021;118.
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  251. ROBERTS KINGMAN GA, Lee D, Jones FC, Desmet D, et al
    Longer or shorter spines: Reciprocal trait evolution in stickleback via triallelic regulatory changes in Stanniocalcin2a.
    Proc Natl Acad Sci U S A. 2021;118.
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    July 2021
  252. RAVINDRAN S
    Profile of Patrick Cramer.
    Proc Natl Acad Sci U S A. 2021;118.
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  253. DAVESNE D, Friedman M, Schmitt AD, Fernandez V, et al
    Fossilized cell structures identify an ancient origin for the teleost whole-genome duplication.
    Proc Natl Acad Sci U S A. 2021;118.
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  254. MITCHELL KJ
    Ancient DNA from the koala lemur puts Madagascar on the paleogenomic map.
    Proc Natl Acad Sci U S A. 2021;118.
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  255. RODRIGUES JA, Hsieh PH, Ruan D, Nishimura T, et al
    Divergence among rice cultivars reveals roles for transposition and epimutation in ongoing evolution of genomic imprinting.
    Proc Natl Acad Sci U S A. 2021;118.
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  256. OSVATIC JT, Wilkins LGE, Leibrecht L, Leray M, et al
    Global biogeography of chemosynthetic symbionts reveals both localized and globally distributed symbiont groups.
    Proc Natl Acad Sci U S A. 2021;118.
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  257. LEONARD MM, Valitutti F, Karathia H, Pujolassos M, et al
    Microbiome signatures of progression toward celiac disease onset in at-risk children in a longitudinal prospective cohort study.
    Proc Natl Acad Sci U S A. 2021;118.
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  258. VIEGAS J
    Profile of Claude Desplan.
    Proc Natl Acad Sci U S A. 2021;118.
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  259. ROYCROFT E, MacDonald AJ, Moritz C, Moussalli A, et al
    Museum genomics reveals the rapid decline and extinction of Australian rodents since European settlement.
    Proc Natl Acad Sci U S A. 2021;118.
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    June 2021
  260. DEVIESE T, Abrams G, Hajdinjak M, Pirson S, et al
    Reply to Van Peer: Direct radiocarbon dating and ancient genomic analysis reveal the true age of the Neanderthals at Spy Cave.
    Proc Natl Acad Sci U S A. 2021;118.
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  261. MARCINIAK S, Mughal MR, Godfrey LR, Bankoff RJ, et al
    Evolutionary and phylogenetic insights from a nuclear genome sequence of the extinct, giant, "subfossil" koala lemur Megaladapis edwardsi.
    Proc Natl Acad Sci U S A. 2021;118.
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  262. BURKE EJ, Rodda SS, Lund SR, Sun Z, et al
    Phage-encoded ten-eleven translocation dioxygenase (TET) is active in C5-cytosine hypermodification in DNA.
    Proc Natl Acad Sci U S A. 2021;118.
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  263. WILSON RM, Tfaily MM, Kolton M, Johnston ER, et al
    Soil metabolome response to whole-ecosystem warming at the Spruce and Peatland Responses under Changing Environments experiment.
    Proc Natl Acad Sci U S A. 2021;118.
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  264. KONOPELSKI SNAVELY SE, Susman MW, Kunz RC, Tan J, et al
    Proteomic analysis identifies the E3 ubiquitin ligase Pdzrn3 as a regulatory target of Wnt5a-Ror signaling.
    Proc Natl Acad Sci U S A. 2021;118.
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  265. LIU Y, Zeng R, Wang R, Weng Y, et al
    Spatiotemporally resolved subcellular phosphoproteomics.
    Proc Natl Acad Sci U S A. 2021;118.
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  266. DALY KG, Mattiangeli V, Hare AJ, Davoudi H, et al
    Herded and hunted goat genomes from the dawn of domestication in the Zagros Mountains.
    Proc Natl Acad Sci U S A. 2021;118.
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  267. BAIRD HP, Shin S, Oberprieler RG, Hulle M, et al
    Fifty million years of beetle evolution along the Antarctic Polar Front.
    Proc Natl Acad Sci U S A. 2021;118.
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  268. HUDSON J, Castilla JC, Teske PR, Beheregaray LB, et al
    Genomics-informed models reveal extensive stretches of coastline under threat by an ecologically dominant invasive species.
    Proc Natl Acad Sci U S A. 2021;118.
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  269. TISZA MJ, Buck CB
    A catalog of tens of thousands of viruses from human metagenomes reveals hidden associations with chronic diseases.
    Proc Natl Acad Sci U S A. 2021;118.
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  270. FRISTOE TS, Chytry M, Dawson W, Essl F, et al
    Dimensions of invasiveness: Links between local abundance, geographic range size, and habitat breadth in Europe's alien and native floras.
    Proc Natl Acad Sci U S A. 2021;118.
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    May 2021
  271. DROTT MT, Rush TA, Satterlee TR, Giannone RJ, et al
    Microevolution in the pansecondary metabolome of Aspergillus flavus and its potential macroevolutionary implications for filamentous fungi.
    Proc Natl Acad Sci U S A. 2021;118.
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  272. DEWITT WS, Harris KD, Ragsdale AP, Harris K, et al
    Nonparametric coalescent inference of mutation spectrum history and demography.
    Proc Natl Acad Sci U S A. 2021;118.
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  273. BOHUTINSKA M, Vlcek J, Yair S, Laenen B, et al
    Genomic basis of parallel adaptation varies with divergence in Arabidopsis and its relatives.
    Proc Natl Acad Sci U S A. 2021;118.
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  274. REBEAUD ME, Mallik S, Goloubinoff P, Tawfik DS, et al
    On the evolution of chaperones and cochaperones and the expansion of proteomes across the Tree of Life.
    Proc Natl Acad Sci U S A. 2021;118.
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  275. DAVIS TH
    Profile of Scott Edwards.
    Proc Natl Acad Sci U S A. 2021;118.
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  276. RICHARDS EJ, McGirr JA, Wang JR, St John ME, et al
    A vertebrate adaptive radiation is assembled from an ancient and disjunct spatiotemporal landscape.
    Proc Natl Acad Sci U S A. 2021;118.
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  277. TAKUSAGAWA M, Kobayashi Y, Fukao Y, Hidaka K, et al
    HBD1 protein with a tandem repeat of two HMG-box domains is a DNA clip to organize chloroplast nucleoids in Chlamydomonas reinhardtii.
    Proc Natl Acad Sci U S A. 2021;118.
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  278. ALMEIDA DD, Viala VL, Nachtigall PG, Broe M, et al
    Tracking the recruitment and evolution of snake toxins using the evolutionary context provided by the Bothrops jararaca genome.
    Proc Natl Acad Sci U S A. 2021;118.
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  279. ANDERSON SAS, Weir JT
    Character displacement drives trait divergence in a continental fauna.
    Proc Natl Acad Sci U S A. 2021;118.
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  280. HUTCHINGS JA, Kuparinen A
    Throwing down a genomic gauntlet on fisheries-induced evolution.
    Proc Natl Acad Sci U S A. 2021;118.
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  281. HAHN M, Covarrubias-Pinto A, Herhaus L, Satpathy S, et al
    SIK2 orchestrates actin-dependent host response upon Salmonella infection.
    Proc Natl Acad Sci U S A. 2021;118.
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  282. PARINS-FUKUCHI C, Stull GW, Smith SA
    Phylogenomic conflict coincides with rapid morphological innovation.
    Proc Natl Acad Sci U S A. 2021;118.
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  283. ROBEY MT, Caesar LK, Drott MT, Keller NP, et al
    An interpreted atlas of biosynthetic gene clusters from 1,000 fungal genomes.
    Proc Natl Acad Sci U S A. 2021;118.
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  284. SWIFT CL, Louie KB, Bowen BP, Olson HM, et al
    Anaerobic gut fungi are an untapped reservoir of natural products.
    Proc Natl Acad Sci U S A. 2021;118.
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  285. SCHUBERT MG, Goodman DB, Wannier TM, Kaur D, et al
    High-throughput functional variant screens via in vivo production of single-stranded DNA.
    Proc Natl Acad Sci U S A. 2021;118.
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  286. PALLARES RM, Faulkner D, An DD, Hebert S, et al
    Genome-wide toxicogenomic study of the lanthanides sheds light on the selective toxicity mechanisms associated with critical materials.
    Proc Natl Acad Sci U S A. 2021;118.
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  287. WALKER AA, Robinson SD, Paluzzi JV, Merritt DJ, et al
    Production, composition, and mode of action of the painful defensive venom produced by a limacodid caterpillar, Doratifera vulnerans.
    Proc Natl Acad Sci U S A. 2021;118.
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    April 2021
  288. EVERSON KM, Gray LN, Jones AG, Lawrence NM, et al
    Geography is more important than life history in the recent diversification of the tiger salamander complex.
    Proc Natl Acad Sci U S A. 2021;118.
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  289. ZENG Y, Li B, Ji C, Feng L, et al
    A unique AtSar1D-AtRabD2a nexus modulates autophagosome biogenesis in Arabidopsis thaliana.
    Proc Natl Acad Sci U S A. 2021;118.
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  290. KLING MM, Ackerly DD
    Global wind patterns shape genetic differentiation, asymmetric gene flow, and genetic diversity in trees.
    Proc Natl Acad Sci U S A. 2021;118.
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  291. HOLDING ML, Strickland JL, Rautsaw RM, Hofmann EP, et al
    Phylogenetically diverse diets favor more complex venoms in North American pitvipers.
    Proc Natl Acad Sci U S A. 2021;118.
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  292. SCHAUDER DM, Shen J, Chen Y, Kasmani MY, et al
    E2A-regulated epigenetic landscape promotes memory CD8 T cell differentiation.
    Proc Natl Acad Sci U S A. 2021;118.
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  293. AHMED F
    Profile of Howard Y. Chang.
    Proc Natl Acad Sci U S A. 2021;118.
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  294. WU KE, Yost KE, Chang HY, Zou J, et al
    BABEL enables cross-modality translation between multiomic profiles at single-cell resolution.
    Proc Natl Acad Sci U S A. 2021;118.
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  295. CAPRILES JM, Santoro CM, George RJ, Flores Bedregal E, et al
    Pre-Columbian transregional captive rearing of Amazonian parrots in the Atacama Desert.
    Proc Natl Acad Sci U S A. 2021;118.
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  296. PALACIOS-FLORES K, Garcia-Sotelo J, Castillo A, Uribe C, et al
    Perfect Match Genomic Landscape strategy: Refinement and customization of reference genomes.
    Proc Natl Acad Sci U S A. 2021;118.
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    March 2021
  297. GENG J, Ji B, Li G, Lopez-Isunza F, et al
    CODY enables quantitatively spatiotemporal predictions on in vivo gut microbial variability induced by diet intervention.
    Proc Natl Acad Sci U S A. 2021;118.
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  298. LARENA M, Sanchez-Quinto F, Sjodin P, McKenna J, et al
    Multiple migrations to the Philippines during the last 50,000 years.
    Proc Natl Acad Sci U S A. 2021;118.
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  299. DEVIESE T, Abrams G, Hajdinjak M, Pirson S, et al
    Reevaluating the timing of Neanderthal disappearance in Northwest Europe.
    Proc Natl Acad Sci U S A. 2021;118.
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  300. KAWAKUBO S, Gao F, Li S, Tan Z, et al
    Genomic analysis of the brassica pathogen turnip mosaic potyvirus reveals its spread along the former trade routes of the Silk Road.
    Proc Natl Acad Sci U S A. 2021;118.
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  301. SINGH-BABAK SD, Babak T, Fraser HB, Johnson AD, et al
    Lineage-specific selection and the evolution of virulence in the Candida clade.
    Proc Natl Acad Sci U S A. 2021;118.
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  302. WEISSMAN JL, Hou S, Fuhrman JA
    Estimating maximal microbial growth rates from cultures, metagenomes, and single cells via codon usage patterns.
    Proc Natl Acad Sci U S A. 2021;118.
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  303. RAYO J, Gregor R, Jacob NT, Dandela R, et al
    Immunoediting role for major vault protein in apoptotic signaling induced by bacterial N-acyl homoserine lactones.
    Proc Natl Acad Sci U S A. 2021;118.
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  304. XIA K, Hagan JT, Fu L, Sheetz BS, et al
    Synthetic heparan sulfate standards and machine learning facilitate the development of solid-state nanopore analysis.
    Proc Natl Acad Sci U S A. 2021;118.
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  305. ANDERSEN SB, Schluter J
    A metagenomics approach to investigate microbiome sociobiology.
    Proc Natl Acad Sci U S A. 2021;118.
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  306. WARD BA, Cael BB, Collins S, Young CR, et al
    Selective constraints on global plankton dispersal.
    Proc Natl Acad Sci U S A. 2021;118.
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  307. TEIXEIRA JC, Huber CD
    The inflated significance of neutral genetic diversity in conservation genetics.
    Proc Natl Acad Sci U S A. 2021;118.
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  308. NADEAU SA, Vaughan TG, Scire J, Huisman JS, et al
    The origin and early spread of SARS-CoV-2 in Europe.
    Proc Natl Acad Sci U S A. 2021;118.
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  309. PLESS E, Saarman NP, Powell JR, Caccone A, et al
    A machine-learning approach to map landscape connectivity in Aedes aegypti with genetic and environmental data.
    Proc Natl Acad Sci U S A. 2021;118.
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    February 2021
  310. VIEGAS J
    Profile of Mark Stoneking.
    Proc Natl Acad Sci U S A. 2021;118.
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  311. LUND-HANSEN KK, Olito C, Morrow EH, Abbott JK, et al
    Sexually antagonistic coevolution between the sex chromosomes of Drosophila melanogaster.
    Proc Natl Acad Sci U S A. 2021;118.
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  312. ORKIN JD, Montague MJ, Tejada-Martinez D, de Manuel M, et al
    The genomics of ecological flexibility, large brains, and long lives in capuchin monkeys revealed with fecalFACS.
    Proc Natl Acad Sci U S A. 2021;118.
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  313. ZHANG W, Xie C, Ullrich K, Zhang YE, et al
    The mutational load in natural populations is significantly affected by high primary rates of retroposition.
    Proc Natl Acad Sci U S A. 2021;118.
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  314. CARD KJ, Thomas MD, Graves JL Jr, Barrick JE, et al
    Genomic evolution of antibiotic resistance is contingent on genetic background following a long-term experiment with Escherichia coli.
    Proc Natl Acad Sci U S A. 2021;118.
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    January 2021
  315. ENBODY ED, Pettersson ME, Sprehn CG, Palm S, et al
    Ecological adaptation in European eels is based on phenotypic plasticity.
    Proc Natl Acad Sci U S A. 2021;118.
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  316. BAKHTIN Y, Katsnelson MI, Wolf YI, Koonin EV, et al
    Evolution in the weak-mutation limit: Stasis periods punctuated by fast transitions between saddle points on the fitness landscape.
    Proc Natl Acad Sci U S A. 2021;118.
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  317. LEVINE ZG, Potter SC, Joiner CM, Fei GQ, et al
    Mammalian cell proliferation requires noncatalytic functions of O-GlcNAc transferase.
    Proc Natl Acad Sci U S A. 2021;118.
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  318. LIU J, Jang JY, Pirooznia M, Liu S, et al
    The secretome mouse provides a genetic platform to delineate tissue-specific in vivo secretion.
    Proc Natl Acad Sci U S A. 2021;118.
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  319. TENA J, Lebrilla CB
    Glycomic profiling and the mammalian brain.
    Proc Natl Acad Sci U S A. 2021;118.
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  320. WHITE MA, Bonfini A, Wolfner MF, Buchon N, et al
    Drosophila melanogaster sex peptide regulates mated female midgut morphology and physiology.
    Proc Natl Acad Sci U S A. 2021;118.
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  321. ZHOU L, Miller C, Miraglia LJ, Romero A, et al
    A genome-wide microRNA screen identifies the microRNA-183/96/182 cluster as a modulator of circadian rhythms.
    Proc Natl Acad Sci U S A. 2021;118.
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  322. SARBANES SL, Blomen VA, Lam E, Heissel S, et al
    E3 ubiquitin ligase Mindbomb 1 facilitates nuclear delivery of adenovirus genomes.
    Proc Natl Acad Sci U S A. 2021;118.
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    December 2020
  323. TAOUFIQ Z, Ninov M, Villar-Briones A, Wang HY, et al
    Hidden proteome of synaptic vesicles in the mammalian brain.
    Proc Natl Acad Sci U S A. 2020;117:33586-33596.
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  324. RINCON-SANDOVAL M, Duarte-Ribeiro E, Davis AM, Santaquiteria A, et al
    Evolutionary determinism and convergence associated with water-column transitions in marine fishes.
    Proc Natl Acad Sci U S A. 2020;117:33396-33403.
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  325. AZAR B
    Profile of Haig H. Kazazian Jr.
    Proc Natl Acad Sci U S A. 2020;117:32185-32188.
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  326. CONCILLI M, Petruzzelli R, Parisi S, Catalano F, et al
    Pharmacoproteomics pinpoints HSP70 interaction for correction of the most frequent Wilson disease-causing mutant of ATP7B.
    Proc Natl Acad Sci U S A. 2020;117:32453-32463.
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  327. LANDY JA, Oschmann A, Munch SB, Walsh MR, et al
    Ancestral genetic variation in phenotypic plasticity underlies rapid evolutionary changes in resurrected populations of waterfleas.
    Proc Natl Acad Sci U S A. 2020;117:32535-32544.
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  328. LI K, Zhang S, Song X, Weyrich A, et al
    Genome evolution of blind subterranean mole rats: Adaptive peripatric versus sympatric speciation.
    Proc Natl Acad Sci U S A. 2020;117:32499-32508.
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  329. BORDA V, Alvim I, Mendes M, Silva-Carvalho C, et al
    The genetic structure and adaptation of Andean highlanders and Amazonians are influenced by the interplay between geography and culture.
    Proc Natl Acad Sci U S A. 2020;117:32557-32565.
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  330. HELMSTETTER AJ, Bethune K, Kamdem NG, Sonke B, et al
    Individualistic evolutionary responses of Central African rain forest plants to Pleistocene climatic fluctuations.
    Proc Natl Acad Sci U S A. 2020;117:32509-32518.
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  331. MARTINSON VG, Gawryluk RMR, Gowen BE, Curtis CI, et al
    Multiple origins of obligate nematode and insect symbionts by a clade of bacteria closely related to plant pathogens.
    Proc Natl Acad Sci U S A. 2020;117:31979-31986.
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  332. RAVINDRAN S
    Profile of Se-Jin Lee.
    Proc Natl Acad Sci U S A. 2020;117:30870-30872.
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  333. YANG HC, Chen CH, Wang JH, Liao HC, et al
    Analysis of genomic distributions of SARS-CoV-2 reveals a dominant strain type with strong allelic associations.
    Proc Natl Acad Sci U S A. 2020;117:30679-30686.
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  334. AUNINS TR, Erickson KE, Chatterjee A
    Transcriptome-based design of antisense inhibitors potentiates carbapenem efficacy in CRE Escherichia coli.
    Proc Natl Acad Sci U S A. 2020;117:30699-30709.
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  335. BISCHOF R, Milleret C, Dupont P, Chipperfield J, et al
    Estimating and forecasting spatial population dynamics of apex predators using transnational genetic monitoring.
    Proc Natl Acad Sci U S A. 2020;117:30531-30538.
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    November 2020
  336. ZHANG H, Zoued A, Liu X, Sit B, et al
    Type I interferon remodels lysosome function and modifies intestinal epithelial defense.
    Proc Natl Acad Sci U S A. 2020;117:29862-29871.
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  337. CHEN D, Zhang Q, Tang W, Huang Z, et al
    The evolutionary origin and domestication history of goldfish (Carassius auratus).
    Proc Natl Acad Sci U S A. 2020;117:29775-29785.
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  338. CLEVES PA, Tinoco AI, Bradford J, Perrin D, et al
    Reduced thermal tolerance in a coral carrying CRISPR-induced mutations in the gene for a heat-shock transcription factor.
    Proc Natl Acad Sci U S A. 2020;117:28899-28905.
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  339. VIEGAS J
    Profile of Masayori Inouye.
    Proc Natl Acad Sci U S A. 2020;117:28543-28545.
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  340. LEE J, Ha S, Kim M, Kim SW, et al
    Spatial and temporal diversity of glycome expression in mammalian brain.
    Proc Natl Acad Sci U S A. 2020;117:28743-28753.
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  341. KIM J, Rosenberg NA, Palacios JA
    Distance metrics for ranked evolutionary trees.
    Proc Natl Acad Sci U S A. 2020;117:28876-28886.
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  342. EPSTEIN JH, Anthony SJ, Islam A, Kilpatrick AM, et al
    Nipah virus dynamics in bats and implications for spillover to humans.
    Proc Natl Acad Sci U S A. 2020;117:29190-29201.
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  343. KOZLENKOV A, Vermunt MW, Apontes P, Li J, et al
    Evolution of regulatory signatures in primate cortical neurons at cell-type resolution.
    Proc Natl Acad Sci U S A. 2020;117:28422-28432.
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  344. ROMERO IC, Kong S, Fowlkes CC, Jaramillo C, et al
    Improving the taxonomy of fossil pollen using convolutional neural networks and superresolution microscopy.
    Proc Natl Acad Sci U S A. 2020;117:28496-28505.
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  345. STOCKLEY P, Franco C, Claydon AJ, Davidson A, et al
    Revealing mechanisms of mating plug function under sexual selection.
    Proc Natl Acad Sci U S A. 2020;117:27465-27473.
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  346. CAO K, Ugarenko M, Ozark PA, Wang J, et al
    DOT1L-controlled cell-fate determination and transcription elongation are independent of H3K79 methylation.
    Proc Natl Acad Sci U S A. 2020;117:27365-27373.
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  347. SHIBL AA, Isaac A, Ochsenkuhn MA, Cardenas A, et al
    Diatom modulation of select bacteria through use of two unique secondary metabolites.
    Proc Natl Acad Sci U S A. 2020;117:27445-27455.
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  348. SHENG X, Qiu C, Liu H, Gluck C, et al
    Systematic integrated analysis of genetic and epigenetic variation in diabetic kidney disease.
    Proc Natl Acad Sci U S A. 2020 Nov 3. pii: 2005905117.
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    October 2020
  349. OIKONOMOU P, Salatino R, Tavazoie S
    In vivo mRNA display enables large-scale proteomics by next generation sequencing.
    Proc Natl Acad Sci U S A. 2020;117:26710-26718.
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  350. BUHLMANN P
    Toward causality and improving external validity.
    Proc Natl Acad Sci U S A. 2020;117:25963-25965.
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  351. CARRILLO JD, Faurby S, Silvestro D, Zizka A, et al
    Disproportionate extinction of South American mammals drove the asymmetry of the Great American Biotic Interchange.
    Proc Natl Acad Sci U S A. 2020;117:26281-26287.
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  352. CHEN J, Lu L, Robb SMC, Collin M, et al
    Genomic diversity generated by a transposable element burst in a rice recombinant inbred population.
    Proc Natl Acad Sci U S A. 2020;117:26288-26297.
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  353. HAN J, Wang S, Yeung K, Yang D, et al
    Proteome-wide effects of naphthalene-derived secondary organic aerosol in BEAS-2B cells are caused by short-lived unsaturated carbonyls.
    Proc Natl Acad Sci U S A. 2020;117:25386-25395.
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  354. HEINDEL DW, Koppolu S, Zhang Y, Kasper B, et al
    Glycomic analysis of host response reveals high mannose as a key mediator of influenza severity.
    Proc Natl Acad Sci U S A. 2020 Oct 12. pii: 2008203117.
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  355. RENNER SS
    Bitter gourd from Africa expanded to Southeast Asia and was domesticated there: A new insight from parallel studies.
    Proc Natl Acad Sci U S A. 2020;117:24630-24631.
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  356. MATSUMURA H, Hsiao MC, Lin YP, Toyoda A, et al
    Reply to Renner: Meticulous investigation, not sequencing effort, leads to robust conclusion.
    Proc Natl Acad Sci U S A. 2020;117:24632-24633.
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  357. ANDERSON KM, Collins MA, Kong R, Fang K, et al
    Convergent molecular, cellular, and cortical neuroimaging signatures of major depressive disorder.
    Proc Natl Acad Sci U S A. 2020;117:25138-25149.
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  358. NGO D, Wen D, Gao Y, Keyes MJ, et al
    Circulating testican-2 is a podocyte-derived marker of kidney health.
    Proc Natl Acad Sci U S A. 2020;117:25026-25035.
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  359. MCWILLIAM HEG, Mak JYW, Awad W, Zorkau M, et al
    Endoplasmic reticulum chaperones stabilize ligand-receptive MR1 molecules for efficient presentation of metabolite antigens.
    Proc Natl Acad Sci U S A. 2020;117:24974-24985.
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  360. TUCHOLSKI T, Cai W, Gregorich ZR, Bayne EF, et al
    Distinct hypertrophic cardiomyopathy genotypes result in convergent sarcomeric proteoform profiles revealed by top-down proteomics.
    Proc Natl Acad Sci U S A. 2020;117:24691-24700.
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    September 2020
  361. ARISTIZABAL MJ, Anreiter I, Halldorsdottir T, Odgers CL, et al
    Biological embedding of experience: A primer on epigenetics.
    Proc Natl Acad Sci U S A. 2020;117:23261-23269.
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  362. MCEWEN LM, O'Donnell KJ, McGill MG, Edgar RD, et al
    The PedBE clock accurately estimates DNA methylation age in pediatric buccal cells.
    Proc Natl Acad Sci U S A. 2020;117:23329-23335.
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  363. VAN DEN BROECK F, Savill NJ, Imamura H, Sanders M, et al
    Ecological divergence and hybridization of Neotropical Leishmania parasites.
    Proc Natl Acad Sci U S A. 2020 Sep 21. pii: 1920136117.
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  364. HECKMANN D, Campeau A, Lloyd CJ, Phaneuf PV, et al
    Kinetic profiling of metabolic specialists demonstrates stability and consistency of in vivo enzyme turnover numbers.
    Proc Natl Acad Sci U S A. 2020;117:23182-23190.
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  365. ALLEN RS, Gregg CM, Okada S, Menon A, et al
    Plant expression of NifD protein variants resistant to mitochondrial degradation.
    Proc Natl Acad Sci U S A. 2020;117:23165-23173.
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  366. BJORKEROTH J, Campbell K, Malina C, Yu R, et al
    Proteome reallocation from amino acid biosynthesis to ribosomes enables yeast to grow faster in rich media.
    Proc Natl Acad Sci U S A. 2020;117:21804-21812.
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  367. WAINBERG M, Magis AT, Earls JC, Lovejoy JC, et al
    Multiomic blood correlates of genetic risk identify presymptomatic disease alterations.
    Proc Natl Acad Sci U S A. 2020;117:21813-21820.
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  368. CAI W, Huang J, Zhu Q, Li BE, et al
    Enhancer dependence of cell-type-specific gene expression increases with developmental age.
    Proc Natl Acad Sci U S A. 2020;117:21450-21458.
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    August 2020
  369. BUFFALO V, Coop G
    Estimating the genome-wide contribution of selection to temporal allele frequency change.
    Proc Natl Acad Sci U S A. 2020;117:20672-20680.
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  370. KWESI-MALIEPAARD EM, Aslam MA, Alemdehy MF, van den Brand T, et al
    The histone methyltransferase DOT1L prevents antigen-independent differentiation and safeguards epigenetic identity of CD8(+) T cells.
    Proc Natl Acad Sci U S A. 2020;117:20706-20716.
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  371. WILLIAMS LM, McCann FE, Cabrita MA, Layton T, et al
    Identifying collagen VI as a target of fibrotic diseases regulated by CREBBP/EP300.
    Proc Natl Acad Sci U S A. 2020;117:20753-20763.
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  372. WEBER JA, Park SG, Luria V, Jeon S, et al
    The whale shark genome reveals how genomic and physiological properties scale with body size.
    Proc Natl Acad Sci U S A. 2020;117:20662-20671.
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  373. CARBALLAR-LEJARAZU R, Ogaugwu C, Tushar T, Kelsey A, et al
    Next-generation gene drive for population modification of the malaria vector mosquito, Anopheles gambiae.
    Proc Natl Acad Sci U S A. 2020 Aug 24. pii: 2010214117.
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  374. LA CONO V, Messina E, Rohde M, Arcadi E, et al
    Symbiosis between nanohaloarchaeon and haloarchaeon is based on utilization of different polysaccharides.
    Proc Natl Acad Sci U S A. 2020;117:20223-20234.
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  375. AMSTER G, Murphy DA, Milligan WR, Sella G, et al
    Changes in life history and population size can explain the relative neutral diversity levels on X and autosomes in extant human populations.
    Proc Natl Acad Sci U S A. 2020;117:20063-20069.
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  376. ABU RAYYAN A, Kamal L, Casadei S, Brownstein Z, et al
    Genomic analysis of inherited hearing loss in the Palestinian population.
    Proc Natl Acad Sci U S A. 2020;117:20070-20076.
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  377. PARK A, Oh S, Jung KL, Choi UY, et al
    Global epigenomic analysis of KSHV-infected primary effusion lymphoma identifies functional MYC superenhancers and enhancer RNAs.
    Proc Natl Acad Sci U S A. 2020 Aug 18. pii: 1922216117.
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  378. ULHUQ FR, Gomes MC, Duggan GM, Guo M, et al
    A membrane-depolarizing toxin substrate of the Staphylococcus aureus type VII secretion system mediates intraspecies competition.
    Proc Natl Acad Sci U S A. 2020 Aug 7. pii: 2006110117.
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    June 2020
  379. SU QP, Zhao ZW, Meng L, Ding M, et al
    Superresolution imaging reveals spatiotemporal propagation of human replication foci mediated by CTCF-organized chromatin structures.
    Proc Natl Acad Sci U S A. 2020;117:15036-15046.
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